Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16230

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
3,683,830	+		BPHYT_RS16225	0.67	-1.5
3,683,830	+		BPHYT_RS16225	0.67	+0.9
3,683,831	-		BPHYT_RS16225	0.67	+0.0
3,683,966	+		BPHYT_RS16225	0.75	+0.9
3,683,966	+		BPHYT_RS16225	0.75	-0.0
3,683,966	+		BPHYT_RS16225	0.75	-0.3
3,683,967	-		BPHYT_RS16225	0.75	-0.5
3,683,967	-		BPHYT_RS16225	0.75	+0.2
3,684,036	+		BPHYT_RS16225	0.79	+0.0
3,684,037	-		BPHYT_RS16225	0.79	+0.2
3,684,227	+				+4.1
3,684,228	-		BPHYT_RS16225	0.90	-0.3
3,684,228	-		BPHYT_RS16225	0.90	+0.3
3,684,228	-		BPHYT_RS16225	0.90	-0.2
3,684,228	-		BPHYT_RS16225	0.90	-0.0
3,684,305	+				+0.1
3,684,305	+				-0.6
3,684,305	+				-0.3
3,684,306	-				+0.1
3,684,306	-				+0.2
3,684,417	+				-1.3
3,684,452	+				-0.0
3,684,483	-				-0.1
3,684,483	-				-0.2
3,684,486	+				-0.9
3,684,486	+				-0.2
3,684,487	-				-0.3
3,684,487	-				-0.5
3,684,489	+				-0.1
3,684,489	+				-0.5
3,684,490	-				+0.6
3,684,490	-				-0.1
3,684,708	-		BPHYT_RS16230	0.11	+0.1
3,684,709	+		BPHYT_RS16230	0.11	-0.3
3,684,709	+		BPHYT_RS16230	0.11	+0.1
3,684,709	+		BPHYT_RS16230	0.11	-0.1
3,684,710	-		BPHYT_RS16230	0.12	+0.1
3,684,710	-		BPHYT_RS16230	0.12	+0.4
3,684,710	-		BPHYT_RS16230	0.12	+0.1
3,684,798	-		BPHYT_RS16230	0.21	-0.7
3,684,827	+		BPHYT_RS16230	0.24	-0.3
3,684,827	+		BPHYT_RS16230	0.24	-0.4
3,684,828	-		BPHYT_RS16230	0.24	+0.5
3,684,828	-		BPHYT_RS16230	0.24	-0.3
3,684,887	+		BPHYT_RS16230	0.30	-0.2
3,684,887	+				-0.7
3,684,891	-		BPHYT_RS16230	0.30	+0.5
3,684,891	-		BPHYT_RS16230	0.30	+0.4
3,685,001	+		BPHYT_RS16230	0.42	-0.4
3,685,002	-		BPHYT_RS16230	0.42	-0.7
3,685,115	-		BPHYT_RS16230	0.54	-0.4
3,685,149	-		BPHYT_RS16230	0.57	-0.4
3,685,160	-		BPHYT_RS16230	0.58	-0.3
3,685,203	-		BPHYT_RS16230	0.63	-0.1
3,685,205	-		BPHYT_RS16230	0.63	+0.8
3,685,217	+		BPHYT_RS16230	0.64	-2.7
3,685,218	-		BPHYT_RS16230	0.64	-0.0
3,685,218	-		BPHYT_RS16230	0.64	-0.6
3,685,259	+		BPHYT_RS16230	0.69	-1.2
3,685,259	+		BPHYT_RS16230	0.69	-2.1
3,685,260	-		BPHYT_RS16230	0.69	-0.1
3,685,260	-		BPHYT_RS16230	0.69	+0.1
3,685,319	+		BPHYT_RS16230	0.75	-1.1
3,685,320	-		BPHYT_RS16230	0.75	+0.7
3,685,320	-		BPHYT_RS16230	0.75	+1.3
3,685,320	-		BPHYT_RS16230	0.75	+0.0
3,685,528	+				-1.1
3,685,560	-				+0.5
3,685,624	-				+0.5
3,685,849	-		BPHYT_RS16235	0.15	+0.3
3,685,932	+		BPHYT_RS16235	0.22	-0.6
3,685,935	+		BPHYT_RS16235	0.22	-0.6
3,686,109	+		BPHYT_RS16235	0.36	+0.3
3,686,109	+		BPHYT_RS16235	0.36	-0.5
3,686,109	+		BPHYT_RS16235	0.36	-0.2
3,686,124	-		BPHYT_RS16235	0.37	+0.4
3,686,238	+		BPHYT_RS16235	0.47	-0.0
3,686,238	+		BPHYT_RS16235	0.47	-0.4
3,686,239	-		BPHYT_RS16235	0.47	-1.0
3,686,307	+		BPHYT_RS16235	0.52	+0.2
3,686,505	+		BPHYT_RS16235	0.68	+0.0
3,686,507	+		BPHYT_RS16235	0.68	-0.0
3,686,508	-		BPHYT_RS16235	0.68	-0.6
3,686,508	-		BPHYT_RS16235	0.68	-0.6
3,686,508	-		BPHYT_RS16235	0.68	-0.2
3,686,508	-		BPHYT_RS16235	0.68	-0.1
3,686,508	-		BPHYT_RS16235	0.68	-0.1
3,686,508	-		BPHYT_RS16235	0.68	-0.1
3,686,511	+		BPHYT_RS16235	0.68	+0.0
3,686,511	+		BPHYT_RS16235	0.68	+0.3
3,686,511	+		BPHYT_RS16235	0.68	+1.8
3,686,511	+		BPHYT_RS16235	0.68	-0.1
3,686,512	-		BPHYT_RS16235	0.68	+0.2