Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS15265 and BPHYT_RS15270 are separated by 352 nucleotides BPHYT_RS15270 and BPHYT_RS15275 are separated by 415 nucleotides
BPHYT_RS15265: BPHYT_RS15265 - DNA polymerase III subunit epsilon, at 3,470,741 to 3,471,892
_RS15265
BPHYT_RS15270: BPHYT_RS15270 - cold-shock protein, at 3,472,245 to 3,472,448
_RS15270
BPHYT_RS15275: BPHYT_RS15275 - hypothetical protein, at 3,472,864 to 3,473,112
_RS15275
Position (kb)
3472
3473 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3471.256 kb on - strand, within BPHYT_RS15265 at 3471.347 kb on - strand, within BPHYT_RS15265 at 3471.353 kb on + strand, within BPHYT_RS15265 at 3471.353 kb on + strand, within BPHYT_RS15265 at 3471.354 kb on - strand, within BPHYT_RS15265 at 3471.930 kb on + strand at 3471.930 kb on + strand at 3471.930 kb on + strand at 3471.930 kb on + strand at 3471.930 kb on + strand at 3471.930 kb on + strand at 3471.930 kb on + strand at 3471.931 kb on - strand at 3471.931 kb on - strand at 3471.931 kb on - strand at 3471.931 kb on - strand at 3471.931 kb on - strand at 3471.931 kb on - strand at 3471.931 kb on - strand at 3471.972 kb on - strand at 3472.012 kb on - strand at 3472.247 kb on - strand at 3472.600 kb on - strand at 3472.633 kb on - strand at 3472.807 kb on + strand at 3472.807 kb on + strand at 3472.807 kb on + strand at 3472.807 kb on + strand at 3472.808 kb on - strand at 3472.808 kb on - strand at 3472.808 kb on - strand at 3472.808 kb on - strand at 3472.808 kb on - strand at 3472.812 kb on - strand at 3472.838 kb on + strand at 3472.841 kb on + strand at 3472.893 kb on + strand, within BPHYT_RS15275 at 3472.893 kb on + strand, within BPHYT_RS15275 at 3472.894 kb on - strand, within BPHYT_RS15275 at 3472.894 kb on - strand, within BPHYT_RS15275 at 3472.894 kb on - strand, within BPHYT_RS15275 at 3473.039 kb on - strand, within BPHYT_RS15275 at 3473.039 kb on - strand, within BPHYT_RS15275 at 3473.042 kb on + strand, within BPHYT_RS15275 at 3473.043 kb on - strand, within BPHYT_RS15275
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 3,471,256 - BPHYT_RS15265 0.45 -0.3 3,471,347 - BPHYT_RS15265 0.53 -0.5 3,471,353 + BPHYT_RS15265 0.53 +0.8 3,471,353 + BPHYT_RS15265 0.53 -0.0 3,471,354 - BPHYT_RS15265 0.53 +0.3 3,471,930 + -0.1 3,471,930 + +4.3 3,471,930 + +0.4 3,471,930 + -1.9 3,471,930 + +0.3 3,471,930 + +0.4 3,471,930 + -0.2 3,471,931 - -0.3 3,471,931 - +0.2 3,471,931 - +0.4 3,471,931 - +0.5 3,471,931 - +0.9 3,471,931 - +0.7 3,471,931 - +0.4 3,471,972 - -0.9 3,472,012 - +0.3 3,472,247 - +0.5 3,472,600 - -1.0 3,472,633 - -0.0 3,472,807 + +0.5 3,472,807 + +0.8 3,472,807 + +0.1 3,472,807 + +0.4 3,472,808 - +1.2 3,472,808 - -0.3 3,472,808 - +0.4 3,472,808 - +0.1 3,472,808 - -1.4 3,472,812 - -0.1 3,472,838 + +0.8 3,472,841 + +0.1 3,472,893 + BPHYT_RS15275 0.12 +1.2 3,472,893 + BPHYT_RS15275 0.12 +0.3 3,472,894 - BPHYT_RS15275 0.12 -0.3 3,472,894 - BPHYT_RS15275 0.12 +0.1 3,472,894 - BPHYT_RS15275 0.12 +1.1 3,473,039 - BPHYT_RS15275 0.70 -0.1 3,473,039 - BPHYT_RS15275 0.70 +0.3 3,473,042 + BPHYT_RS15275 0.71 +0.7 3,473,043 - BPHYT_RS15275 0.72 -0.1
Or see this region's nucleotide sequence