Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS14730 and BPHYT_RS14735 are separated by 1 nucleotides BPHYT_RS14735 and BPHYT_RS14740 are separated by 201 nucleotides BPHYT_RS14740 and BPHYT_RS14745 are separated by 113 nucleotides BPHYT_RS14745 and BPHYT_RS14750 are separated by 93 nucleotides
BPHYT_RS14730: BPHYT_RS14730 - GTPase RsgA, at 3,354,981 to 3,355,931
_RS14730
BPHYT_RS14735: BPHYT_RS14735 - hypothetical protein, at 3,355,933 to 3,356,253
_RS14735
BPHYT_RS14740: BPHYT_RS14740 - threonine-phosphate decarboxylase, at 3,356,455 to 3,357,393
_RS14740
BPHYT_RS14745: BPHYT_RS14745 - DNA mismatch repair protein MutT, at 3,357,507 to 3,358,235
_RS14745
BPHYT_RS14750: BPHYT_RS14750 - 50S ribosomal protein L19, at 3,358,329 to 3,358,718
_RS14750
Position (kb)
3356
3357
3358 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3355.890 kb on + strand at 3356.205 kb on + strand, within BPHYT_RS14735 at 3356.283 kb on + strand at 3356.284 kb on - strand at 3356.506 kb on + strand at 3356.507 kb on - strand at 3356.726 kb on + strand, within BPHYT_RS14740 at 3356.727 kb on - strand, within BPHYT_RS14740 at 3356.986 kb on - strand, within BPHYT_RS14740 at 3356.986 kb on - strand, within BPHYT_RS14740 at 3356.986 kb on - strand, within BPHYT_RS14740 at 3357.013 kb on - strand, within BPHYT_RS14740 at 3357.021 kb on + strand, within BPHYT_RS14740 at 3357.137 kb on + strand, within BPHYT_RS14740 at 3357.186 kb on - strand, within BPHYT_RS14740 at 3357.194 kb on + strand, within BPHYT_RS14740 at 3357.194 kb on + strand, within BPHYT_RS14740 at 3357.194 kb on + strand, within BPHYT_RS14740 at 3357.194 kb on + strand, within BPHYT_RS14740 at 3357.194 kb on + strand, within BPHYT_RS14740 at 3357.195 kb on - strand, within BPHYT_RS14740 at 3357.195 kb on - strand, within BPHYT_RS14740 at 3357.195 kb on - strand, within BPHYT_RS14740 at 3357.197 kb on + strand, within BPHYT_RS14740 at 3357.197 kb on + strand, within BPHYT_RS14740 at 3357.305 kb on + strand at 3357.376 kb on + strand at 3357.419 kb on + strand at 3357.420 kb on - strand at 3357.430 kb on + strand at 3357.430 kb on + strand at 3357.431 kb on - strand at 3357.526 kb on + strand at 3357.568 kb on + strand at 3357.569 kb on - strand at 3358.321 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 3,355,890 + -0.7 3,356,205 + BPHYT_RS14735 0.85 -0.2 3,356,283 + -1.7 3,356,284 - +1.1 3,356,506 + -5.2 3,356,507 - -0.7 3,356,726 + BPHYT_RS14740 0.29 -1.2 3,356,727 - BPHYT_RS14740 0.29 -1.5 3,356,986 - BPHYT_RS14740 0.57 -1.5 3,356,986 - BPHYT_RS14740 0.57 -1.6 3,356,986 - BPHYT_RS14740 0.57 -0.7 3,357,013 - BPHYT_RS14740 0.59 -2.1 3,357,021 + BPHYT_RS14740 0.60 -2.1 3,357,137 + BPHYT_RS14740 0.73 -1.7 3,357,186 - BPHYT_RS14740 0.78 -2.7 3,357,194 + BPHYT_RS14740 0.79 -0.7 3,357,194 + BPHYT_RS14740 0.79 -1.1 3,357,194 + BPHYT_RS14740 0.79 -1.7 3,357,194 + BPHYT_RS14740 0.79 -2.5 3,357,194 + BPHYT_RS14740 0.79 -1.5 3,357,195 - BPHYT_RS14740 0.79 -1.3 3,357,195 - BPHYT_RS14740 0.79 -1.7 3,357,195 - BPHYT_RS14740 0.79 -2.3 3,357,197 + BPHYT_RS14740 0.79 -0.5 3,357,197 + BPHYT_RS14740 0.79 -1.4 3,357,305 + -2.4 3,357,376 + -1.5 3,357,419 + -0.8 3,357,420 - -0.1 3,357,430 + -2.3 3,357,430 + -1.1 3,357,431 - +0.1 3,357,526 + +0.3 3,357,568 + -0.4 3,357,569 - -0.2 3,358,321 + +0.7
Or see this region's nucleotide sequence