Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12155
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,771,335 | + | -0.3 | |||
2,772,148 | - | -0.5 | |||
2,772,313 | + | -0.2 | |||
2,772,772 | + | BPHYT_RS12155 | 0.59 | +0.1 | |
2,772,772 | + | BPHYT_RS12155 | 0.59 | +0.6 | |
2,772,773 | - | BPHYT_RS12155 | 0.59 | -0.4 | |
2,772,773 | - | BPHYT_RS12155 | 0.59 | -0.4 | |
2,772,848 | + | BPHYT_RS12155 | 0.69 | -0.1 | |
2,772,848 | + | BPHYT_RS12155 | 0.69 | -0.3 | |
2,772,849 | - | BPHYT_RS12155 | 0.69 | +1.3 | |
2,773,057 | + | -0.1 | |||
2,773,058 | - | -0.2 | |||
2,773,058 | - | -0.3 | |||
2,773,295 | - | BPHYT_RS12160 | 0.16 | +1.1 | |
2,773,396 | + | BPHYT_RS12160 | 0.34 | +1.1 | |
2,773,397 | - | BPHYT_RS12160 | 0.35 | +1.4 | |
2,773,510 | - | BPHYT_RS12160 | 0.56 | +1.2 | |
2,773,746 | - | +1.0 | |||
2,773,746 | - | +0.7 | |||
2,773,765 | + | +1.6 | |||
2,773,765 | + | +1.7 | |||
2,773,766 | - | -0.0 |
Or see this region's nucleotide sequence