Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11705
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,653,220 | - | +0.1 | |||
2,653,225 | - | -0.2 | |||
2,653,225 | - | -0.1 | |||
2,653,770 | - | -0.4 | |||
2,654,350 | + | BPHYT_RS11705 | 0.76 | -0.4 | |
2,654,351 | - | BPHYT_RS11705 | 0.76 | -3.8 | |
2,655,002 | - | BPHYT_RS11710 | 0.17 | +0.2 | |
2,655,058 | - | +0.9 | |||
2,655,114 | - | BPHYT_RS11710 | 0.24 | -0.5 | |
2,655,386 | + | BPHYT_RS11710 | 0.43 | +0.2 | |
2,655,438 | - | BPHYT_RS11710 | 0.46 | -0.7 | |
2,655,438 | - | BPHYT_RS11710 | 0.46 | +0.3 |
Or see this region's nucleotide sequence