Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09315
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,111,426 | + | BPHYT_RS09310 | 0.79 | -1.0 | |
2,111,427 | - | BPHYT_RS09310 | 0.79 | +0.4 | |
2,111,427 | - | BPHYT_RS09310 | 0.79 | +1.5 | |
2,112,386 | - | BPHYT_RS09315 | 0.86 | -3.7 | |
2,112,507 | - | +2.0 | |||
2,112,542 | - | +1.8 | |||
2,112,597 | - | +2.6 | |||
2,112,679 | - | +1.7 | |||
2,112,681 | - | +1.9 | |||
2,112,981 | + | +2.2 | |||
2,112,981 | + | +2.2 | |||
2,112,981 | + | +2.8 | |||
2,112,982 | - | +2.8 | |||
2,113,042 | + | +2.4 | |||
2,113,056 | - | +1.4 | |||
2,113,154 | + | +0.1 | |||
2,113,242 | + | -0.8 | |||
2,113,242 | + | +0.3 | |||
2,113,242 | + | -0.1 | |||
2,113,243 | - | +2.2 | |||
2,113,243 | - | +2.1 | |||
2,113,261 | - | +1.5 | |||
2,113,280 | + | +0.4 | |||
2,113,280 | + | -0.9 | |||
2,113,281 | - | +2.4 | |||
2,113,281 | - | +2.5 |
Or see this region's nucleotide sequence