Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09195
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,080,239 | - | BPHYT_RS09190 | 0.34 | +0.1 | |
2,080,242 | - | BPHYT_RS09190 | 0.34 | -0.1 | |
2,080,289 | - | BPHYT_RS09190 | 0.38 | -0.4 | |
2,080,956 | - | +1.0 | |||
2,081,164 | + | +0.0 | |||
2,081,165 | - | +0.5 | |||
2,081,380 | - | BPHYT_RS09195 | 0.40 | +0.3 | |
2,081,433 | + | BPHYT_RS09195 | 0.51 | +0.1 | |
2,081,675 | + | -0.5 | |||
2,081,676 | - | -1.6 | |||
2,081,677 | + | +0.1 | |||
2,081,794 | - | -0.2 | |||
2,081,921 | + | +0.1 | |||
2,081,921 | + | -0.8 | |||
2,081,922 | - | -1.3 | |||
2,081,922 | - | -0.2 |
Or see this region's nucleotide sequence