Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09100
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,058,211 | + | BPHYT_RS09095 | 0.35 | -0.1 | |
2,058,277 | + | BPHYT_RS09095 | 0.41 | +0.3 | |
2,058,278 | - | BPHYT_RS09095 | 0.41 | -0.4 | |
2,058,698 | - | BPHYT_RS09095 | 0.85 | +0.2 | |
2,058,880 | + | +1.2 | |||
2,058,881 | - | -0.1 | |||
2,059,010 | + | -0.3 | |||
2,059,010 | + | -0.3 | |||
2,059,256 | + | BPHYT_RS09100 | 0.24 | -2.9 | |
2,059,256 | + | BPHYT_RS09100 | 0.24 | -0.1 | |
2,059,257 | - | BPHYT_RS09100 | 0.24 | -4.0 | |
2,059,315 | + | BPHYT_RS09100 | 0.32 | +0.2 | |
2,059,316 | - | BPHYT_RS09100 | 0.32 | -2.5 | |
2,059,316 | - | BPHYT_RS09100 | 0.32 | -0.8 | |
2,060,374 | + | BPHYT_RS09105 | 0.52 | +0.3 | |
2,060,375 | - | BPHYT_RS09105 | 0.52 | -5.7 | |
2,060,562 | + | BPHYT_RS09105 | 0.70 | -1.1 | |
2,060,563 | - | BPHYT_RS09105 | 0.70 | -3.3 | |
2,060,630 | - | BPHYT_RS09105 | 0.76 | -5.5 | |
2,060,630 | - | BPHYT_RS09105 | 0.76 | -2.4 | |
2,060,717 | + | BPHYT_RS09105 | 0.84 | -0.7 | |
2,060,717 | + | BPHYT_RS09105 | 0.84 | -0.8 |
Or see this region's nucleotide sequence