Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06885

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
1,557,967	+		BPHYT_RS06880	0.12	-0.1
1,558,138	-		BPHYT_RS06880	0.32	-0.3
1,558,138	-		BPHYT_RS06880	0.32	+0.6
1,558,194	+		BPHYT_RS06880	0.38	+0.0
1,558,212	+		BPHYT_RS06880	0.41	+1.0
1,558,212	+		BPHYT_RS06880	0.41	+0.3
1,558,213	-		BPHYT_RS06880	0.41	-0.4
1,558,293	+		BPHYT_RS06880	0.50	+1.2
1,558,293	+		BPHYT_RS06880	0.50	+0.3
1,558,294	-		BPHYT_RS06880	0.50	+0.4
1,558,294	-		BPHYT_RS06880	0.50	+1.1
1,558,409	-		BPHYT_RS06880	0.64	+1.4
1,558,410	+		BPHYT_RS06880	0.64	+0.3
1,558,411	-		BPHYT_RS06880	0.64	-0.2
1,558,474	-		BPHYT_RS06880	0.72	-0.5
1,558,474	-		BPHYT_RS06880	0.72	-0.6
1,558,474	-		BPHYT_RS06880	0.72	-0.1
1,558,474	-		BPHYT_RS06880	0.72	-0.1
1,558,573	-		BPHYT_RS06880	0.83	-0.1
1,558,600	+		BPHYT_RS06880	0.86	+0.2
1,558,600	+		BPHYT_RS06880	0.86	-0.8
1,558,602	+		BPHYT_RS06880	0.87	+0.2
1,558,602	+		BPHYT_RS06880	0.87	+0.8
1,558,602	+		BPHYT_RS06880	0.87	+0.2
1,558,609	-		BPHYT_RS06880	0.87	+0.2
1,558,609	-		BPHYT_RS06880	0.87	+2.0
1,558,632	+				-1.0
1,558,632	+				-0.1
1,558,632	+				+0.0
1,558,823	+				+0.2
1,558,828	+				-0.6
1,559,198	+		BPHYT_RS06885	0.27	-1.0
1,559,198	+		BPHYT_RS06885	0.27	-0.3
1,559,199	-		BPHYT_RS06885	0.27	+0.1
1,559,283	+		BPHYT_RS06885	0.36	-0.2
1,559,300	-		BPHYT_RS06885	0.38	+0.3
1,559,322	-		BPHYT_RS06885	0.40	+2.3
1,559,322	-		BPHYT_RS06885	0.40	-0.1
1,559,322	-		BPHYT_RS06885	0.40	+0.7
1,559,357	+		BPHYT_RS06885	0.44	+0.1
1,559,357	+		BPHYT_RS06885	0.44	+0.3
1,559,357	+		BPHYT_RS06885	0.44	+0.5
1,559,358	-		BPHYT_RS06885	0.44	+0.7
1,559,456	+		BPHYT_RS06885	0.54	+0.2
1,559,555	+		BPHYT_RS06885	0.64	+1.6
1,559,556	-		BPHYT_RS06885	0.64	-0.1
1,559,603	+		BPHYT_RS06885	0.69	-0.1
1,559,603	+		BPHYT_RS06885	0.69	+0.0
1,559,603	+		BPHYT_RS06885	0.69	-0.0
1,559,604	-		BPHYT_RS06885	0.69	+0.3
1,559,675	+		BPHYT_RS06885	0.76	-3.0
1,559,675	+		BPHYT_RS06885	0.76	+0.1
1,559,676	-		BPHYT_RS06885	0.76	+1.0
1,559,676	-		BPHYT_RS06885	0.76	+0.1
1,559,745	-		BPHYT_RS06885	0.84	+0.1
1,559,745	-		BPHYT_RS06885	0.84	+0.4
1,559,834	+				+1.4
1,559,964	+				+0.1
1,560,014	+				-0.2
1,560,014	+				+0.5
1,560,015	-				+0.2
1,560,015	-				-0.3
1,560,054	+				+0.0
1,560,054	+				+0.1
1,560,526	+		BPHYT_RS06890	0.50	+0.1
1,560,526	+		BPHYT_RS06890	0.50	-0.1
1,560,526	+		BPHYT_RS06890	0.50	+0.5
1,560,526	+		BPHYT_RS06890	0.50	+0.0
1,560,526	+		BPHYT_RS06890	0.50	+0.0
1,560,526	+		BPHYT_RS06890	0.50	-0.5
1,560,527	-		BPHYT_RS06890	0.50	-2.2
1,560,527	-		BPHYT_RS06890	0.50	-0.4
1,560,556	+		BPHYT_RS06890	0.54	+1.4
1,560,604	+		BPHYT_RS06890	0.60	-0.0
1,560,605	-		BPHYT_RS06890	0.60	-0.3
1,560,605	-		BPHYT_RS06890	0.60	-0.5
1,560,605	-		BPHYT_RS06890	0.60	+0.8
1,560,894	+				+3.0
1,560,895	-				-0.8
1,560,895	-				-0.2