Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS06810 and BPHYT_RS06815 are separated by 495 nucleotides BPHYT_RS06815 and BPHYT_RS06820 are separated by 17 nucleotides BPHYT_RS06820 and BPHYT_RS06825 are separated by 68 nucleotides BPHYT_RS06825 and BPHYT_RS06830 are separated by 314 nucleotides
BPHYT_RS06810: BPHYT_RS06810 - membrane protein, at 1,539,955 to 1,541,073
_RS06810
BPHYT_RS06815: BPHYT_RS06815 - 16S ribosomal RNA, at 1,541,569 to 1,543,163
_RS06815
BPHYT_RS06820: BPHYT_RS06820 - tRNA-Ile, at 1,543,181 to 1,543,257
_RS06820
BPHYT_RS06825: BPHYT_RS06825 - tRNA-Ala, at 1,543,326 to 1,543,401
_RS06825
BPHYT_RS06830: BPHYT_RS06830 - 23S ribosomal RNA, at 1,543,716 to 1,546,618
_RS06830
Position (kb)
1541
1542
1543
1544 Strain fitness (log2 ratio)
-1
0
1 at 1540.573 kb on - strand, within BPHYT_RS06810 at 1540.757 kb on - strand, within BPHYT_RS06810 at 1540.860 kb on + strand, within BPHYT_RS06810 at 1540.861 kb on - strand, within BPHYT_RS06810 at 1540.889 kb on + strand, within BPHYT_RS06810 at 1540.889 kb on + strand, within BPHYT_RS06810 at 1540.889 kb on + strand, within BPHYT_RS06810 at 1540.889 kb on + strand, within BPHYT_RS06810 at 1540.890 kb on - strand, within BPHYT_RS06810 at 1540.890 kb on - strand, within BPHYT_RS06810 at 1540.893 kb on + strand, within BPHYT_RS06810 at 1540.893 kb on + strand, within BPHYT_RS06810 at 1540.963 kb on + strand at 1540.963 kb on + strand at 1540.964 kb on - strand at 1540.964 kb on - strand at 1540.964 kb on - strand at 1540.965 kb on + strand at 1540.965 kb on + strand at 1540.965 kb on + strand at 1540.965 kb on + strand at 1540.965 kb on + strand at 1540.965 kb on + strand at 1540.966 kb on - strand at 1540.966 kb on - strand at 1540.966 kb on - strand at 1541.075 kb on + strand at 1541.076 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 1,540,573 - BPHYT_RS06810 0.55 -1.2 1,540,757 - BPHYT_RS06810 0.72 +0.2 1,540,860 + BPHYT_RS06810 0.81 +0.1 1,540,861 - BPHYT_RS06810 0.81 -0.6 1,540,889 + BPHYT_RS06810 0.83 +0.9 1,540,889 + BPHYT_RS06810 0.83 -0.1 1,540,889 + BPHYT_RS06810 0.83 +0.2 1,540,889 + BPHYT_RS06810 0.83 +0.9 1,540,890 - BPHYT_RS06810 0.84 -0.8 1,540,890 - BPHYT_RS06810 0.84 +0.2 1,540,893 + BPHYT_RS06810 0.84 +0.0 1,540,893 + BPHYT_RS06810 0.84 -0.7 1,540,963 + +0.1 1,540,963 + +0.2 1,540,964 - -0.5 1,540,964 - -0.2 1,540,964 - -0.1 1,540,965 + -0.2 1,540,965 + +1.1 1,540,965 + -0.1 1,540,965 + -0.7 1,540,965 + -0.1 1,540,965 + -0.0 1,540,966 - +0.4 1,540,966 - +0.8 1,540,966 - +0.6 1,541,075 + -0.6 1,541,076 - -0.2
Or see this region's nucleotide sequence