Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06585

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
1,494,656	-		BPHYT_RS06580	0.54	+0.0
1,494,840	+		BPHYT_RS06580	0.83	+0.1
1,494,841	-		BPHYT_RS06580	0.83	+0.2
1,494,965	+				+0.2
1,494,966	-				+0.1
1,495,002	+				-0.2
1,495,003	-				+0.1
1,495,047	-				-0.1
1,495,147	+				-0.2
1,495,151	+				-0.7
1,495,151	+				+0.5
1,495,151	+				+0.3
1,495,152	-				-0.6
1,495,152	-				-0.4
1,495,154	-				-1.1
1,495,154	-				+0.1
1,495,269	+		BPHYT_RS06585	0.16	-0.9
1,495,269	+		BPHYT_RS06585	0.16	-2.0
1,495,270	-		BPHYT_RS06585	0.17	-1.3
1,495,270	-		BPHYT_RS06585	0.17	-1.1
1,495,270	-		BPHYT_RS06585	0.17	-1.6
1,495,278	+		BPHYT_RS06585	0.18	-1.6
1,495,279	-		BPHYT_RS06585	0.18	-2.2
1,495,279	-		BPHYT_RS06585	0.18	-0.5
1,495,300	-		BPHYT_RS06585	0.22	-2.3
1,495,306	-		BPHYT_RS06585	0.23	-1.3
1,495,306	-		BPHYT_RS06585	0.23	-1.5
1,495,338	+		BPHYT_RS06585	0.29	-1.6
1,495,338	+		BPHYT_RS06585	0.29	-1.3
1,495,339	-		BPHYT_RS06585	0.29	-1.2
1,495,339	-		BPHYT_RS06585	0.29	-1.5
1,495,410	+		BPHYT_RS06585	0.42	-0.9
1,495,411	-		BPHYT_RS06585	0.42	-1.5
1,495,542	+		BPHYT_RS06585	0.66	-1.8
1,495,603	-		BPHYT_RS06585	0.77	-2.0
1,495,603	-		BPHYT_RS06585	0.77	-1.1
1,495,731	+				-3.1
1,495,731	+				-1.3
1,495,731	+				-0.5
1,495,732	-				-0.5
1,495,732	-				-0.9
1,495,732	-				+1.4
1,495,763	+				-0.6
1,495,779	+				-0.5
1,495,862	+				-0.6
1,495,862	+				+0.1
1,495,863	-				-0.9
1,495,881	+				+1.4
1,495,881	+				-0.5
1,495,881	+				-0.1
1,495,881	+				-0.6
1,495,882	-				+0.8
1,495,882	-				-1.3
1,495,882	-				-1.2
1,495,983	+				-0.2
1,496,100	-		BPHYT_RS06590	0.13	+0.8
1,496,361	+		BPHYT_RS06590	0.32	-0.5
1,496,463	+		BPHYT_RS06590	0.39	+0.8
1,496,463	+		BPHYT_RS06590	0.39	-0.5
1,496,463	+		BPHYT_RS06590	0.39	+0.3
1,496,464	-		BPHYT_RS06590	0.39	-1.5
1,496,596	-		BPHYT_RS06590	0.48	+0.3
1,496,596	-		BPHYT_RS06590	0.48	-0.1
1,496,596	-		BPHYT_RS06590	0.48	+0.2
1,496,596	-		BPHYT_RS06590	0.48	+0.3
1,496,596	-		BPHYT_RS06590	0.48	-0.8
1,496,596	-		BPHYT_RS06590	0.48	-0.5
1,496,613	+		BPHYT_RS06590	0.50	-0.5
1,496,613	+		BPHYT_RS06590	0.50	-0.2
1,496,614	-		BPHYT_RS06590	0.50	-0.8
1,496,614	-		BPHYT_RS06590	0.50	-0.4
1,496,614	-		BPHYT_RS06590	0.50	+0.1