Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06195
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,413,133 | + | BPHYT_RS06190 | 0.20 | -2.1 | |
1,413,221 | - | BPHYT_RS06190 | 0.27 | -3.3 | |
1,413,689 | + | BPHYT_RS06190 | 0.69 | -4.7 | |
1,414,833 | + | BPHYT_RS06195 | 0.59 | -1.7 | |
1,415,052 | - | BPHYT_RS06195 | 0.75 | -2.7 | |
1,415,264 | - | -4.8 | |||
1,415,452 | + | -0.3 | |||
1,415,614 | - | +4.4 | |||
1,415,636 | + | BPHYT_RS06200 | 0.20 | +0.1 | |
1,415,636 | + | BPHYT_RS06200 | 0.20 | -0.2 | |
1,415,636 | + | BPHYT_RS06200 | 0.20 | -0.1 | |
1,415,636 | + | BPHYT_RS06200 | 0.20 | -0.6 | |
1,415,636 | + | BPHYT_RS06200 | 0.20 | +0.1 | |
1,415,637 | - | BPHYT_RS06200 | 0.20 | +0.1 | |
1,415,688 | + | BPHYT_RS06200 | 0.24 | +1.7 | |
1,415,740 | + | BPHYT_RS06200 | 0.28 | +0.1 | |
1,415,883 | - | BPHYT_RS06200 | 0.39 | +0.5 | |
1,415,915 | + | BPHYT_RS06200 | 0.42 | -0.7 | |
1,416,140 | + | BPHYT_RS06200 | 0.60 | +1.0 | |
1,416,290 | + | BPHYT_RS06200 | 0.71 | +1.0 | |
1,416,291 | - | BPHYT_RS06200 | 0.72 | +0.1 |
Or see this region's nucleotide sequence