Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04390
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,010,587 | - | BPHYT_RS04385 | 0.51 | -3.3 | |
1,010,793 | + | BPHYT_RS04385 | 0.62 | -2.8 | |
1,011,201 | + | BPHYT_RS04385 | 0.84 | -2.6 | |
1,011,473 | + | -1.5 | |||
1,011,473 | + | -2.8 | |||
1,011,474 | - | +1.5 | |||
1,012,762 | - | +0.0 | |||
1,012,814 | + | -0.3 | |||
1,012,815 | - | -0.2 | |||
1,012,815 | - | +0.7 | |||
1,012,937 | + | -0.0 | |||
1,012,941 | + | -0.1 | |||
1,013,140 | + | +2.9 | |||
1,013,140 | + | BPHYT_RS04395 | 0.13 | -0.3 | |
1,013,233 | + | BPHYT_RS04395 | 0.19 | -0.6 | |
1,013,233 | + | BPHYT_RS04395 | 0.19 | +0.0 | |
1,013,373 | + | BPHYT_RS04395 | 0.28 | -0.8 | |
1,013,401 | + | BPHYT_RS04395 | 0.30 | -0.4 | |
1,013,401 | + | BPHYT_RS04395 | 0.30 | -0.1 |
Or see this region's nucleotide sequence