Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS04305 and BPHYT_RS04310 are separated by 85 nucleotides BPHYT_RS04310 and BPHYT_RS04315 are separated by 27 nucleotides
BPHYT_RS04305: BPHYT_RS04305 - hypothetical protein, at 987,528 to 989,003
_RS04305
BPHYT_RS04310: BPHYT_RS04310 - group 1 glycosyl transferase, at 989,089 to 993,141
_RS04310
BPHYT_RS04315: BPHYT_RS04315 - UDP-N-acetylglucosamine 2-epimerase, at 993,169 to 994,305
_RS04315
Position (kb) 989
990
991
992
993
994 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 988.520 kb on + strand, within BPHYT_RS04305 at 988.581 kb on - strand, within BPHYT_RS04305 at 988.632 kb on + strand, within BPHYT_RS04305 at 988.674 kb on + strand, within BPHYT_RS04305 at 988.675 kb on - strand, within BPHYT_RS04305 at 989.001 kb on + strand at 989.001 kb on + strand at 989.001 kb on + strand at 989.002 kb on - strand at 989.089 kb on - strand at 989.167 kb on + strand at 989.167 kb on + strand at 989.168 kb on - strand at 989.664 kb on + strand, within BPHYT_RS04310 at 989.774 kb on - strand, within BPHYT_RS04310 at 989.774 kb on - strand, within BPHYT_RS04310 at 990.286 kb on + strand, within BPHYT_RS04310 at 990.550 kb on + strand, within BPHYT_RS04310 at 990.558 kb on + strand, within BPHYT_RS04310 at 990.564 kb on + strand, within BPHYT_RS04310 at 990.564 kb on + strand, within BPHYT_RS04310 at 990.607 kb on + strand, within BPHYT_RS04310 at 990.772 kb on + strand, within BPHYT_RS04310 at 990.773 kb on - strand, within BPHYT_RS04310 at 990.940 kb on + strand, within BPHYT_RS04310 at 990.940 kb on + strand, within BPHYT_RS04310 at 990.941 kb on - strand, within BPHYT_RS04310 at 990.997 kb on + strand, within BPHYT_RS04310 at 991.365 kb on + strand, within BPHYT_RS04310 at 991.845 kb on + strand, within BPHYT_RS04310 at 992.205 kb on + strand, within BPHYT_RS04310 at 992.206 kb on - strand, within BPHYT_RS04310 at 992.212 kb on + strand, within BPHYT_RS04310 at 992.212 kb on + strand, within BPHYT_RS04310 at 992.213 kb on - strand, within BPHYT_RS04310 at 992.213 kb on - strand, within BPHYT_RS04310 at 992.275 kb on + strand, within BPHYT_RS04310 at 992.863 kb on + strand at 993.161 kb on + strand at 993.162 kb on - strand at 993.165 kb on + strand at 993.165 kb on + strand at 993.166 kb on - strand at 993.166 kb on - strand at 993.186 kb on - strand at 993.693 kb on + strand, within BPHYT_RS04315 at 993.713 kb on - strand, within BPHYT_RS04315 at 993.713 kb on - strand, within BPHYT_RS04315 at 993.895 kb on - strand, within BPHYT_RS04315 at 993.912 kb on + strand, within BPHYT_RS04315 at 993.913 kb on - strand, within BPHYT_RS04315 at 993.970 kb on + strand, within BPHYT_RS04315 at 993.971 kb on - strand, within BPHYT_RS04315 at 993.991 kb on + strand, within BPHYT_RS04315 at 994.029 kb on + strand, within BPHYT_RS04315 at 994.030 kb on - strand, within BPHYT_RS04315
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 988,520 + BPHYT_RS04305 0.67 +0.6 988,581 - BPHYT_RS04305 0.71 +0.5 988,632 + BPHYT_RS04305 0.75 -1.2 988,674 + BPHYT_RS04305 0.78 -0.3 988,675 - BPHYT_RS04305 0.78 -0.5 989,001 + -0.0 989,001 + -0.5 989,001 + -0.9 989,002 - -0.5 989,089 - -2.5 989,167 + +1.0 989,167 + +1.7 989,168 - -1.9 989,664 + BPHYT_RS04310 0.14 -0.1 989,774 - BPHYT_RS04310 0.17 -2.3 989,774 - BPHYT_RS04310 0.17 -1.5 990,286 + BPHYT_RS04310 0.30 +0.6 990,550 + BPHYT_RS04310 0.36 +1.2 990,558 + BPHYT_RS04310 0.36 +0.2 990,564 + BPHYT_RS04310 0.36 +0.4 990,564 + BPHYT_RS04310 0.36 +0.3 990,607 + BPHYT_RS04310 0.37 -0.0 990,772 + BPHYT_RS04310 0.42 +0.4 990,773 - BPHYT_RS04310 0.42 -2.1 990,940 + BPHYT_RS04310 0.46 -0.2 990,940 + BPHYT_RS04310 0.46 -0.4 990,941 - BPHYT_RS04310 0.46 -1.5 990,997 + BPHYT_RS04310 0.47 -0.4 991,365 + BPHYT_RS04310 0.56 -1.2 991,845 + BPHYT_RS04310 0.68 -3.8 992,205 + BPHYT_RS04310 0.77 -2.1 992,206 - BPHYT_RS04310 0.77 -1.7 992,212 + BPHYT_RS04310 0.77 -2.5 992,212 + BPHYT_RS04310 0.77 -1.0 992,213 - BPHYT_RS04310 0.77 -2.7 992,213 - BPHYT_RS04310 0.77 -3.5 992,275 + BPHYT_RS04310 0.79 -3.1 992,863 + -3.8 993,161 + -1.0 993,162 - +0.7 993,165 + -0.4 993,165 + -0.1 993,166 - -0.1 993,166 - +0.3 993,186 - -0.5 993,693 + BPHYT_RS04315 0.46 +0.8 993,713 - BPHYT_RS04315 0.48 +0.5 993,713 - BPHYT_RS04315 0.48 -1.0 993,895 - BPHYT_RS04315 0.64 +1.1 993,912 + BPHYT_RS04315 0.65 +0.8 993,913 - BPHYT_RS04315 0.65 +0.6 993,970 + BPHYT_RS04315 0.70 -2.4 993,971 - BPHYT_RS04315 0.71 +0.0 993,991 + BPHYT_RS04315 0.72 +0.3 994,029 + BPHYT_RS04315 0.76 +0.4 994,030 - BPHYT_RS04315 0.76 +0.8
Or see this region's nucleotide sequence