Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS03645 and BPHYT_RS03650 are separated by 45 nucleotides BPHYT_RS03650 and BPHYT_RS03655 are separated by 206 nucleotides
BPHYT_RS03645: BPHYT_RS03645 - tRNA dimethylallyltransferase, at 828,042 to 828,989
_RS03645
BPHYT_RS03650: BPHYT_RS03650 - DNA mismatch repair protein, at 829,035 to 831,098
_RS03650
BPHYT_RS03655: BPHYT_RS03655 - membrane protein, at 831,305 to 831,976
_RS03655
Position (kb) 829
830
831
832 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 828.196 kb on + strand, within BPHYT_RS03645 at 828.271 kb on - strand, within BPHYT_RS03645 at 828.474 kb on - strand, within BPHYT_RS03645 at 828.667 kb on + strand, within BPHYT_RS03645 at 828.978 kb on - strand at 829.084 kb on + strand at 829.085 kb on - strand at 829.258 kb on + strand, within BPHYT_RS03650 at 829.259 kb on - strand, within BPHYT_RS03650 at 829.508 kb on - strand, within BPHYT_RS03650 at 829.508 kb on - strand, within BPHYT_RS03650 at 829.576 kb on + strand, within BPHYT_RS03650 at 829.577 kb on - strand, within BPHYT_RS03650 at 829.577 kb on - strand, within BPHYT_RS03650 at 829.667 kb on - strand, within BPHYT_RS03650 at 830.183 kb on - strand, within BPHYT_RS03650 at 830.183 kb on - strand, within BPHYT_RS03650 at 830.240 kb on + strand, within BPHYT_RS03650 at 830.748 kb on - strand, within BPHYT_RS03650 at 831.019 kb on - strand at 831.109 kb on + strand at 831.110 kb on - strand at 831.152 kb on + strand at 831.192 kb on + strand at 831.193 kb on - strand at 831.293 kb on - strand at 831.318 kb on + strand at 831.567 kb on - strand, within BPHYT_RS03655 at 831.833 kb on + strand, within BPHYT_RS03655 at 831.983 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 828,196 + BPHYT_RS03645 0.16 +1.9 828,271 - BPHYT_RS03645 0.24 +1.1 828,474 - BPHYT_RS03645 0.46 +1.6 828,667 + BPHYT_RS03645 0.66 +1.0 828,978 - +0.0 829,084 + -0.1 829,085 - -1.0 829,258 + BPHYT_RS03650 0.11 +0.4 829,259 - BPHYT_RS03650 0.11 -0.2 829,508 - BPHYT_RS03650 0.23 +0.1 829,508 - BPHYT_RS03650 0.23 +0.4 829,576 + BPHYT_RS03650 0.26 +1.6 829,577 - BPHYT_RS03650 0.26 +0.4 829,577 - BPHYT_RS03650 0.26 +0.1 829,667 - BPHYT_RS03650 0.31 +0.1 830,183 - BPHYT_RS03650 0.56 +1.8 830,183 - BPHYT_RS03650 0.56 +0.3 830,240 + BPHYT_RS03650 0.58 +0.5 830,748 - BPHYT_RS03650 0.83 +0.2 831,019 - +1.0 831,109 + +0.1 831,110 - -0.1 831,152 + -0.1 831,192 + -0.3 831,193 - -0.4 831,293 - -3.9 831,318 + -3.1 831,567 - BPHYT_RS03655 0.39 -2.8 831,833 + BPHYT_RS03655 0.79 -2.7 831,983 - -0.8
Or see this region's nucleotide sequence