Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS02095 and BPHYT_RS02100 are separated by 65 nucleotides BPHYT_RS02100 and BPHYT_RS02105 are separated by 111 nucleotides
BPHYT_RS02095: BPHYT_RS02095 - alpha/beta hydrolase, at 483,161 to 484,051
_RS02095
BPHYT_RS02100: BPHYT_RS02100 - AsnC family transcriptional regulator, at 484,117 to 484,587
_RS02100
BPHYT_RS02105: BPHYT_RS02105 - multidrug DMT transporter permease, at 484,699 to 485,601
_RS02105
Position (kb) 484
485 Strain fitness (log2 ratio) -1
0
1 at 483.348 kb on - strand, within BPHYT_RS02095 at 483.570 kb on - strand, within BPHYT_RS02095 at 483.570 kb on - strand, within BPHYT_RS02095 at 483.570 kb on - strand, within BPHYT_RS02095 at 483.674 kb on + strand, within BPHYT_RS02095 at 483.675 kb on - strand, within BPHYT_RS02095 at 483.675 kb on - strand, within BPHYT_RS02095 at 483.675 kb on - strand, within BPHYT_RS02095 at 483.675 kb on - strand at 483.794 kb on + strand, within BPHYT_RS02095 at 483.980 kb on + strand at 483.980 kb on + strand at 483.981 kb on - strand at 483.981 kb on - strand at 483.981 kb on - strand at 484.050 kb on - strand at 484.050 kb on - strand at 484.236 kb on - strand, within BPHYT_RS02100 at 484.605 kb on - strand at 484.828 kb on - strand, within BPHYT_RS02105 at 484.865 kb on + strand, within BPHYT_RS02105 at 485.091 kb on - strand, within BPHYT_RS02105 at 485.201 kb on - strand, within BPHYT_RS02105 at 485.384 kb on - strand, within BPHYT_RS02105
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 483,348 - BPHYT_RS02095 0.21 +0.0 483,570 - BPHYT_RS02095 0.46 -0.3 483,570 - BPHYT_RS02095 0.46 +0.4 483,570 - BPHYT_RS02095 0.46 +0.1 483,674 + BPHYT_RS02095 0.58 +0.3 483,675 - BPHYT_RS02095 0.58 +0.9 483,675 - BPHYT_RS02095 0.58 -0.5 483,675 - BPHYT_RS02095 0.58 -0.8 483,675 - -0.8 483,794 + BPHYT_RS02095 0.71 -0.0 483,980 + -0.7 483,980 + -0.6 483,981 - -0.0 483,981 - -0.1 483,981 - -1.2 484,050 - -1.3 484,050 - -0.1 484,236 - BPHYT_RS02100 0.25 -1.1 484,605 - -1.0 484,828 - BPHYT_RS02105 0.14 -0.5 484,865 + BPHYT_RS02105 0.18 +0.1 485,091 - BPHYT_RS02105 0.43 -0.0 485,201 - BPHYT_RS02105 0.56 +0.6 485,384 - BPHYT_RS02105 0.76 -0.8
Or see this region's nucleotide sequence