Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_28235
Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.0032 mg/ml |
---|---|---|---|---|---|
remove | |||||
6,523,912 | + | AO356_28230 | 0.59 | -0.0 | |
6,524,356 | - | +0.4 | |||
6,524,593 | - | -0.2 | |||
6,524,835 | + | +0.3 | |||
6,524,904 | - | AO356_28235 | 0.12 | +0.9 | |
6,524,904 | - | AO356_28235 | 0.12 | -0.7 | |
6,525,186 | + | AO356_28235 | 0.27 | +0.2 | |
6,525,195 | + | AO356_28235 | 0.27 | -1.5 | |
6,525,195 | + | AO356_28235 | 0.27 | +0.7 | |
6,525,195 | + | AO356_28235 | 0.27 | -0.3 | |
6,525,196 | - | AO356_28235 | 0.27 | -1.0 | |
6,525,196 | - | AO356_28235 | 0.27 | -0.3 | |
6,525,198 | - | AO356_28235 | 0.27 | -0.7 | |
6,525,270 | - | AO356_28235 | 0.31 | +0.9 | |
6,525,627 | + | AO356_28235 | 0.51 | -0.9 | |
6,525,628 | - | AO356_28235 | 0.51 | +0.1 | |
6,525,822 | + | AO356_28235 | 0.61 | -1.0 | |
6,526,087 | - | AO356_28235 | 0.76 | -0.3 | |
6,526,191 | + | AO356_28235 | 0.81 | -0.5 | |
6,526,751 | + | AO356_28240 | 0.21 | +1.0 | |
6,527,088 | - | AO356_28240 | 0.57 | +0.2 | |
6,527,321 | + | AO356_28240 | 0.82 | -1.3 | |
6,527,321 | + | AO356_28240 | 0.82 | +0.8 | |
6,527,322 | - | AO356_28240 | 0.82 | -0.3 | |
6,527,372 | + | AO356_28240 | 0.87 | +0.8 | |
6,527,383 | + | AO356_28240 | 0.88 | +0.5 | |
6,527,399 | + | -0.1 | |||
6,527,439 | - | -0.4 | |||
6,527,439 | - | +0.9 |
Or see this region's nucleotide sequence