Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27055 and AO356_27060 are separated by 233 nucleotides AO356_27060 and AO356_27065 are separated by 130 nucleotides
AO356_27055: AO356_27055 - DNA helicase UvrD, at 6,166,056 to 6,168,524
_27055
AO356_27060: AO356_27060 - pirin, at 6,168,758 to 6,169,453
_27060
AO356_27065: AO356_27065 - phosphoglucomutase, at 6,169,584 to 6,171,230
_27065
Position (kb)
6168
6169
6170 Strain fitness (log2 ratio)
-2
-1
0
1 at 6167.870 kb on + strand, within AO356_27055 at 6168.026 kb on - strand, within AO356_27055 at 6168.026 kb on - strand, within AO356_27055 at 6168.026 kb on - strand, within AO356_27055 at 6168.048 kb on + strand, within AO356_27055 at 6168.049 kb on - strand, within AO356_27055 at 6168.185 kb on + strand, within AO356_27055 at 6168.185 kb on + strand, within AO356_27055 at 6168.332 kb on + strand at 6168.333 kb on - strand at 6168.334 kb on + strand at 6168.334 kb on + strand at 6168.334 kb on + strand at 6168.334 kb on + strand at 6168.335 kb on - strand at 6168.335 kb on - strand at 6168.340 kb on + strand at 6168.713 kb on + strand at 6168.713 kb on + strand at 6168.843 kb on - strand, within AO356_27060 at 6168.843 kb on - strand, within AO356_27060 at 6168.845 kb on + strand, within AO356_27060 at 6168.845 kb on + strand, within AO356_27060 at 6168.956 kb on + strand, within AO356_27060 at 6168.956 kb on + strand, within AO356_27060 at 6168.956 kb on + strand, within AO356_27060 at 6168.956 kb on + strand, within AO356_27060 at 6168.956 kb on + strand, within AO356_27060 at 6168.956 kb on + strand, within AO356_27060 at 6168.957 kb on - strand, within AO356_27060 at 6168.957 kb on - strand, within AO356_27060 at 6168.957 kb on - strand, within AO356_27060 at 6168.957 kb on - strand, within AO356_27060 at 6168.957 kb on - strand, within AO356_27060 at 6168.957 kb on - strand, within AO356_27060 at 6169.026 kb on + strand, within AO356_27060 at 6169.026 kb on + strand, within AO356_27060 at 6169.026 kb on + strand, within AO356_27060 at 6169.026 kb on + strand, within AO356_27060 at 6169.027 kb on - strand, within AO356_27060 at 6169.027 kb on - strand, within AO356_27060 at 6169.027 kb on - strand, within AO356_27060 at 6169.027 kb on - strand, within AO356_27060 at 6169.027 kb on - strand, within AO356_27060 at 6169.027 kb on - strand, within AO356_27060 at 6169.067 kb on + strand, within AO356_27060 at 6169.068 kb on - strand, within AO356_27060 at 6169.104 kb on + strand, within AO356_27060 at 6169.104 kb on + strand, within AO356_27060 at 6169.105 kb on - strand, within AO356_27060 at 6169.105 kb on - strand, within AO356_27060 at 6169.339 kb on - strand, within AO356_27060 at 6169.582 kb on + strand at 6169.582 kb on + strand at 6169.583 kb on - strand at 6169.583 kb on - strand at 6169.583 kb on - strand at 6169.583 kb on - strand at 6169.681 kb on + strand at 6169.681 kb on + strand at 6169.681 kb on + strand at 6169.681 kb on + strand at 6169.681 kb on + strand at 6169.682 kb on - strand at 6169.682 kb on - strand at 6169.682 kb on - strand at 6169.682 kb on - strand at 6169.682 kb on - strand at 6169.685 kb on + strand at 6170.125 kb on + strand, within AO356_27065 at 6170.126 kb on - strand, within AO356_27065 at 6170.178 kb on + strand, within AO356_27065 at 6170.178 kb on + strand, within AO356_27065 at 6170.179 kb on - strand, within AO356_27065 at 6170.254 kb on + strand, within AO356_27065 at 6170.255 kb on - strand, within AO356_27065
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 6,167,870 + AO356_27055 0.73 +1.7 6,168,026 - AO356_27055 0.80 -0.6 6,168,026 - AO356_27055 0.80 +0.6 6,168,026 - AO356_27055 0.80 +1.2 6,168,048 + AO356_27055 0.81 +0.2 6,168,049 - AO356_27055 0.81 -0.6 6,168,185 + AO356_27055 0.86 -0.1 6,168,185 + AO356_27055 0.86 -0.4 6,168,332 + -0.6 6,168,333 - -0.3 6,168,334 + +1.2 6,168,334 + -1.0 6,168,334 + +0.1 6,168,334 + -0.2 6,168,335 - +0.1 6,168,335 - +0.3 6,168,340 + -0.5 6,168,713 + -0.4 6,168,713 + +0.2 6,168,843 - AO356_27060 0.12 -0.0 6,168,843 - AO356_27060 0.12 +0.8 6,168,845 + AO356_27060 0.12 -0.1 6,168,845 + AO356_27060 0.12 +0.1 6,168,956 + AO356_27060 0.28 +0.3 6,168,956 + AO356_27060 0.28 -0.7 6,168,956 + AO356_27060 0.28 -0.6 6,168,956 + AO356_27060 0.28 -0.2 6,168,956 + AO356_27060 0.28 -0.1 6,168,956 + AO356_27060 0.28 +0.1 6,168,957 - AO356_27060 0.29 +0.7 6,168,957 - AO356_27060 0.29 -0.5 6,168,957 - AO356_27060 0.29 -2.1 6,168,957 - AO356_27060 0.29 -0.8 6,168,957 - AO356_27060 0.29 -1.0 6,168,957 - AO356_27060 0.29 +0.3 6,169,026 + AO356_27060 0.39 +0.6 6,169,026 + AO356_27060 0.39 -0.3 6,169,026 + AO356_27060 0.39 -0.6 6,169,026 + AO356_27060 0.39 -1.1 6,169,027 - AO356_27060 0.39 -0.8 6,169,027 - AO356_27060 0.39 +0.4 6,169,027 - AO356_27060 0.39 -0.1 6,169,027 - AO356_27060 0.39 -2.3 6,169,027 - AO356_27060 0.39 -0.2 6,169,027 - AO356_27060 0.39 -0.4 6,169,067 + AO356_27060 0.44 -0.2 6,169,068 - AO356_27060 0.45 -1.4 6,169,104 + AO356_27060 0.50 +0.5 6,169,104 + AO356_27060 0.50 +0.2 6,169,105 - AO356_27060 0.50 -1.4 6,169,105 - AO356_27060 0.50 -0.5 6,169,339 - AO356_27060 0.83 -0.4 6,169,582 + +0.9 6,169,582 + +0.2 6,169,583 - +0.7 6,169,583 - +1.0 6,169,583 - -1.1 6,169,583 - -0.8 6,169,681 + -0.5 6,169,681 + +0.1 6,169,681 + +0.1 6,169,681 + +0.5 6,169,681 + -1.3 6,169,682 - +0.9 6,169,682 - -0.2 6,169,682 - +0.1 6,169,682 - +0.3 6,169,682 - -1.0 6,169,685 + -0.7 6,170,125 + AO356_27065 0.33 -0.9 6,170,126 - AO356_27065 0.33 -0.7 6,170,178 + AO356_27065 0.36 -0.9 6,170,178 + AO356_27065 0.36 +0.4 6,170,179 - AO356_27065 0.36 -0.3 6,170,254 + AO356_27065 0.41 +1.5 6,170,255 - AO356_27065 0.41 -0.9
Or see this region's nucleotide sequence