Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27025 and AO356_27030 are separated by 141 nucleotides AO356_27030 and AO356_27035 are separated by 112 nucleotides
AO356_27025: AO356_27025 - peptidase, at 6,158,740 to 6,160,518
_27025
AO356_27030: AO356_27030 - alkaline proteinase inhibitor, at 6,160,660 to 6,161,097
_27030
AO356_27035: AO356_27035 - serine 3-dehydrogenase, at 6,161,210 to 6,162,664
_27035
Position (kb)
6160
6161
6162 Strain fitness (log2 ratio)
-2
-1
0
1 at 6159.950 kb on + strand, within AO356_27025 at 6159.951 kb on - strand, within AO356_27025 at 6160.064 kb on + strand, within AO356_27025 at 6160.064 kb on + strand, within AO356_27025 at 6160.064 kb on + strand, within AO356_27025 at 6160.064 kb on + strand, within AO356_27025 at 6160.064 kb on + strand, within AO356_27025 at 6160.064 kb on + strand, within AO356_27025 at 6160.064 kb on + strand, within AO356_27025 at 6160.065 kb on - strand, within AO356_27025 at 6160.079 kb on + strand, within AO356_27025 at 6160.079 kb on + strand, within AO356_27025 at 6160.079 kb on + strand, within AO356_27025 at 6160.080 kb on - strand, within AO356_27025 at 6160.143 kb on + strand, within AO356_27025 at 6160.144 kb on - strand, within AO356_27025 at 6160.218 kb on - strand, within AO356_27025 at 6160.280 kb on - strand, within AO356_27025 at 6160.318 kb on + strand, within AO356_27025 at 6160.377 kb on - strand at 6160.390 kb on - strand at 6160.391 kb on + strand at 6160.392 kb on - strand at 6160.392 kb on - strand at 6160.461 kb on + strand at 6160.462 kb on - strand at 6160.462 kb on - strand at 6160.480 kb on - strand at 6160.560 kb on - strand at 6160.560 kb on - strand at 6160.653 kb on + strand at 6160.681 kb on - strand at 6160.681 kb on - strand at 6160.695 kb on + strand at 6160.696 kb on - strand at 6160.696 kb on - strand at 6160.699 kb on + strand at 6160.700 kb on - strand at 6160.804 kb on - strand, within AO356_27030 at 6160.994 kb on - strand, within AO356_27030 at 6161.073 kb on + strand at 6161.092 kb on - strand at 6161.161 kb on + strand at 6161.161 kb on + strand at 6161.161 kb on + strand at 6161.162 kb on - strand at 6161.196 kb on - strand at 6161.206 kb on - strand at 6161.206 kb on - strand at 6161.211 kb on + strand at 6161.830 kb on - strand, within AO356_27035 at 6161.917 kb on - strand, within AO356_27035 at 6161.970 kb on + strand, within AO356_27035 at 6161.971 kb on - strand, within AO356_27035 at 6162.006 kb on + strand, within AO356_27035 at 6162.006 kb on + strand, within AO356_27035 at 6162.007 kb on - strand, within AO356_27035 at 6162.007 kb on - strand, within AO356_27035 at 6162.007 kb on - strand, within AO356_27035 at 6162.007 kb on - strand, within AO356_27035 at 6162.007 kb on - strand, within AO356_27035 at 6162.021 kb on + strand, within AO356_27035 at 6162.021 kb on + strand, within AO356_27035 at 6162.048 kb on + strand, within AO356_27035 at 6162.049 kb on - strand, within AO356_27035
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 6,159,950 + AO356_27025 0.68 -1.1 6,159,951 - AO356_27025 0.68 -1.3 6,160,064 + AO356_27025 0.74 -0.1 6,160,064 + AO356_27025 0.74 -0.7 6,160,064 + AO356_27025 0.74 +0.2 6,160,064 + AO356_27025 0.74 -0.4 6,160,064 + AO356_27025 0.74 +1.1 6,160,064 + AO356_27025 0.74 -0.2 6,160,064 + AO356_27025 0.74 +0.1 6,160,065 - AO356_27025 0.74 -1.4 6,160,079 + AO356_27025 0.75 -2.3 6,160,079 + AO356_27025 0.75 -0.6 6,160,079 + AO356_27025 0.75 +0.6 6,160,080 - AO356_27025 0.75 -1.7 6,160,143 + AO356_27025 0.79 +1.2 6,160,144 - AO356_27025 0.79 -0.1 6,160,218 - AO356_27025 0.83 +0.5 6,160,280 - AO356_27025 0.87 -1.1 6,160,318 + AO356_27025 0.89 +0.8 6,160,377 - -0.7 6,160,390 - +0.1 6,160,391 + +0.5 6,160,392 - -0.5 6,160,392 - +0.6 6,160,461 + +1.5 6,160,462 - +0.7 6,160,462 - +0.4 6,160,480 - +0.0 6,160,560 - -0.9 6,160,560 - -0.6 6,160,653 + +0.6 6,160,681 - -0.3 6,160,681 - -0.6 6,160,695 + -0.0 6,160,696 - -0.0 6,160,696 - -1.2 6,160,699 + -0.6 6,160,700 - -0.9 6,160,804 - AO356_27030 0.33 -0.1 6,160,994 - AO356_27030 0.76 -0.3 6,161,073 + -0.0 6,161,092 - +0.4 6,161,161 + -0.9 6,161,161 + +0.1 6,161,161 + +0.7 6,161,162 - +1.2 6,161,196 - -0.4 6,161,206 - -0.1 6,161,206 - -0.4 6,161,211 + -1.8 6,161,830 - AO356_27035 0.43 -1.1 6,161,917 - AO356_27035 0.49 +0.9 6,161,970 + AO356_27035 0.52 -1.4 6,161,971 - AO356_27035 0.52 +0.5 6,162,006 + AO356_27035 0.55 +0.7 6,162,006 + AO356_27035 0.55 +0.6 6,162,007 - AO356_27035 0.55 +0.3 6,162,007 - AO356_27035 0.55 -0.4 6,162,007 - AO356_27035 0.55 +0.9 6,162,007 - AO356_27035 0.55 +0.7 6,162,007 - AO356_27035 0.55 -0.1 6,162,021 + AO356_27035 0.56 -1.2 6,162,021 + AO356_27035 0.56 -1.1 6,162,048 + AO356_27035 0.58 +0.2 6,162,049 - AO356_27035 0.58 -0.2
Or see this region's nucleotide sequence