Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27015 and AO356_27020 are separated by 14 nucleotides AO356_27020 and AO356_27025 overlap by 4 nucleotides
AO356_27015: AO356_27015 - peptidase, at 6,156,045 to 6,157,394
_27015
AO356_27020: AO356_27020 - hemolysin D, at 6,157,409 to 6,158,743
_27020
AO356_27025: AO356_27025 - peptidase, at 6,158,740 to 6,160,518
_27025
Position (kb)
6157
6158
6159 Strain fitness (log2 ratio)
-1
0
1
2 at 6156.449 kb on - strand, within AO356_27015 at 6156.449 kb on - strand, within AO356_27015 at 6156.490 kb on + strand, within AO356_27015 at 6156.490 kb on + strand, within AO356_27015 at 6156.502 kb on + strand, within AO356_27015 at 6156.503 kb on - strand, within AO356_27015 at 6156.510 kb on - strand, within AO356_27015 at 6156.510 kb on - strand, within AO356_27015 at 6156.639 kb on - strand, within AO356_27015 at 6156.750 kb on + strand, within AO356_27015 at 6156.970 kb on + strand, within AO356_27015 at 6156.970 kb on + strand, within AO356_27015 at 6156.970 kb on + strand, within AO356_27015 at 6156.971 kb on - strand, within AO356_27015 at 6157.066 kb on + strand, within AO356_27015 at 6157.076 kb on - strand, within AO356_27015 at 6157.114 kb on + strand, within AO356_27015 at 6157.115 kb on - strand, within AO356_27015 at 6157.115 kb on - strand, within AO356_27015 at 6157.199 kb on - strand, within AO356_27015 at 6157.199 kb on - strand, within AO356_27015 at 6157.199 kb on - strand, within AO356_27015 at 6157.285 kb on + strand at 6157.286 kb on - strand at 6157.286 kb on - strand at 6157.289 kb on + strand at 6157.290 kb on - strand at 6157.316 kb on - strand at 6157.382 kb on - strand at 6157.394 kb on + strand at 6157.411 kb on - strand at 6157.461 kb on + strand at 6157.462 kb on - strand at 6157.462 kb on - strand at 6157.462 kb on - strand at 6157.462 kb on - strand at 6157.579 kb on - strand, within AO356_27020 at 6157.582 kb on - strand, within AO356_27020 at 6157.959 kb on + strand, within AO356_27020 at 6157.959 kb on + strand, within AO356_27020 at 6157.959 kb on + strand, within AO356_27020 at 6158.076 kb on + strand, within AO356_27020 at 6158.104 kb on - strand, within AO356_27020 at 6159.068 kb on + strand, within AO356_27025 at 6159.069 kb on - strand, within AO356_27025 at 6159.069 kb on - strand, within AO356_27025 at 6159.069 kb on - strand, within AO356_27025 at 6159.146 kb on + strand, within AO356_27025 at 6159.146 kb on + strand, within AO356_27025 at 6159.147 kb on - strand, within AO356_27025 at 6159.147 kb on - strand, within AO356_27025 at 6159.288 kb on - strand, within AO356_27025
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 6,156,449 - AO356_27015 0.30 -0.3 6,156,449 - AO356_27015 0.30 +0.5 6,156,490 + AO356_27015 0.33 -0.8 6,156,490 + AO356_27015 0.33 +0.3 6,156,502 + AO356_27015 0.34 +0.9 6,156,503 - AO356_27015 0.34 +0.1 6,156,510 - AO356_27015 0.34 +0.1 6,156,510 - AO356_27015 0.34 +1.9 6,156,639 - AO356_27015 0.44 +1.1 6,156,750 + AO356_27015 0.52 -0.1 6,156,970 + AO356_27015 0.69 +0.7 6,156,970 + AO356_27015 0.69 +1.1 6,156,970 + AO356_27015 0.69 +0.4 6,156,971 - AO356_27015 0.69 -0.4 6,157,066 + AO356_27015 0.76 -0.8 6,157,076 - AO356_27015 0.76 +0.3 6,157,114 + AO356_27015 0.79 -0.2 6,157,115 - AO356_27015 0.79 -0.5 6,157,115 - AO356_27015 0.79 +0.1 6,157,199 - AO356_27015 0.85 -0.1 6,157,199 - AO356_27015 0.85 -0.1 6,157,199 - AO356_27015 0.85 +0.7 6,157,285 + -0.7 6,157,286 - +0.2 6,157,286 - -0.5 6,157,289 + +0.6 6,157,290 - -0.6 6,157,316 - +0.5 6,157,382 - +0.0 6,157,394 + -0.2 6,157,411 - -0.3 6,157,461 + -0.7 6,157,462 - +0.7 6,157,462 - +0.3 6,157,462 - -0.1 6,157,462 - +1.2 6,157,579 - AO356_27020 0.13 +0.2 6,157,582 - AO356_27020 0.13 +0.4 6,157,959 + AO356_27020 0.41 -0.2 6,157,959 + AO356_27020 0.41 -0.3 6,157,959 + AO356_27020 0.41 +0.5 6,158,076 + AO356_27020 0.50 -0.5 6,158,104 - AO356_27020 0.52 -1.2 6,159,068 + AO356_27025 0.18 -1.0 6,159,069 - AO356_27025 0.18 -1.2 6,159,069 - AO356_27025 0.18 -0.7 6,159,069 - AO356_27025 0.18 -0.6 6,159,146 + AO356_27025 0.23 +0.5 6,159,146 + AO356_27025 0.23 +0.9 6,159,147 - AO356_27025 0.23 -0.3 6,159,147 - AO356_27025 0.23 -0.4 6,159,288 - AO356_27025 0.31 -1.5
Or see this region's nucleotide sequence