Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26105 and AO356_26110 overlap by 11 nucleotides AO356_26110 and AO356_26115 overlap by 8 nucleotides AO356_26115 and AO356_26120 overlap by 4 nucleotides AO356_26120 and AO356_26125 are separated by 144 nucleotides
AO356_26105: AO356_26105 - FAD-dependent oxidoreductase, at 5,910,823 to 5,911,902
_26105
AO356_26110: AO356_26110 - sarcosine oxidase subunit alpha, at 5,911,892 to 5,912,221
_26110
AO356_26115: AO356_26115 - (2Fe-2S)-binding protein, at 5,912,214 to 5,913,587
_26115
AO356_26120: AO356_26120 - cytochrome C2, at 5,913,584 to 5,913,934
_26120
AO356_26125: AO356_26125 - ABC transporter substrate-binding protein, at 5,914,079 to 5,914,861
_26125
Position (kb) 5912
5913
5914 Strain fitness (log2 ratio) -2
-1
0
1 at 5911.522 kb on + strand, within AO356_26105 at 5911.522 kb on + strand, within AO356_26105 at 5911.522 kb on + strand, within AO356_26105 at 5911.522 kb on + strand, within AO356_26105 at 5911.523 kb on - strand, within AO356_26105 at 5911.523 kb on - strand, within AO356_26105 at 5911.523 kb on - strand, within AO356_26105 at 5911.523 kb on - strand, within AO356_26105 at 5911.523 kb on - strand, within AO356_26105 at 5911.523 kb on - strand, within AO356_26105 at 5911.661 kb on + strand, within AO356_26105 at 5911.662 kb on - strand, within AO356_26105 at 5911.720 kb on + strand, within AO356_26105 at 5911.986 kb on + strand, within AO356_26110 at 5912.066 kb on + strand, within AO356_26110 at 5912.066 kb on + strand, within AO356_26110 at 5912.451 kb on + strand, within AO356_26115 at 5912.502 kb on + strand, within AO356_26115 at 5912.503 kb on - strand, within AO356_26115 at 5912.503 kb on - strand, within AO356_26115 at 5912.675 kb on - strand, within AO356_26115 at 5912.701 kb on - strand, within AO356_26115 at 5913.226 kb on - strand, within AO356_26115 at 5913.232 kb on + strand, within AO356_26115 at 5913.233 kb on - strand, within AO356_26115 at 5913.296 kb on + strand, within AO356_26115 at 5913.297 kb on - strand, within AO356_26115 at 5913.504 kb on + strand at 5913.507 kb on + strand at 5913.590 kb on - strand at 5913.590 kb on - strand at 5913.590 kb on - strand at 5913.590 kb on - strand at 5914.055 kb on + strand at 5914.055 kb on + strand at 5914.056 kb on - strand at 5914.238 kb on + strand, within AO356_26125 at 5914.238 kb on + strand, within AO356_26125 at 5914.239 kb on - strand, within AO356_26125 at 5914.450 kb on + strand, within AO356_26125 at 5914.508 kb on - strand, within AO356_26125 at 5914.508 kb on - strand, within AO356_26125 at 5914.520 kb on + strand, within AO356_26125 at 5914.520 kb on + strand, within AO356_26125 at 5914.565 kb on + strand, within AO356_26125
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 5,911,522 + AO356_26105 0.65 -0.1 5,911,522 + AO356_26105 0.65 +0.3 5,911,522 + AO356_26105 0.65 +1.0 5,911,522 + AO356_26105 0.65 -0.4 5,911,523 - AO356_26105 0.65 -2.5 5,911,523 - AO356_26105 0.65 -0.2 5,911,523 - AO356_26105 0.65 -0.7 5,911,523 - AO356_26105 0.65 -0.1 5,911,523 - AO356_26105 0.65 -1.2 5,911,523 - AO356_26105 0.65 +1.0 5,911,661 + AO356_26105 0.78 -0.8 5,911,662 - AO356_26105 0.78 +0.2 5,911,720 + AO356_26105 0.83 -2.0 5,911,986 + AO356_26110 0.28 -0.3 5,912,066 + AO356_26110 0.53 +0.6 5,912,066 + AO356_26110 0.53 -0.5 5,912,451 + AO356_26115 0.17 -0.5 5,912,502 + AO356_26115 0.21 -1.4 5,912,503 - AO356_26115 0.21 -0.0 5,912,503 - AO356_26115 0.21 +0.1 5,912,675 - AO356_26115 0.34 +0.7 5,912,701 - AO356_26115 0.35 -0.9 5,913,226 - AO356_26115 0.74 -0.2 5,913,232 + AO356_26115 0.74 -0.6 5,913,233 - AO356_26115 0.74 -0.5 5,913,296 + AO356_26115 0.79 -0.2 5,913,297 - AO356_26115 0.79 +0.5 5,913,504 + -0.1 5,913,507 + +0.8 5,913,590 - -0.4 5,913,590 - -0.5 5,913,590 - +0.4 5,913,590 - -0.4 5,914,055 + -0.2 5,914,055 + +0.6 5,914,056 - -0.3 5,914,238 + AO356_26125 0.20 +0.1 5,914,238 + AO356_26125 0.20 -0.6 5,914,239 - AO356_26125 0.20 -0.9 5,914,450 + AO356_26125 0.47 +0.3 5,914,508 - AO356_26125 0.55 -0.2 5,914,508 - AO356_26125 0.55 -0.5 5,914,520 + AO356_26125 0.56 +0.4 5,914,520 + AO356_26125 0.56 -0.9 5,914,565 + AO356_26125 0.62 +0.7
Or see this region's nucleotide sequence