Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25765 and AO356_25770 overlap by 4 nucleotides AO356_25770 and AO356_25775 are separated by 44 nucleotides AO356_25775 and AO356_25780 are separated by 205 nucleotides
AO356_25765: AO356_25765 - carnitine dehydratase, at 5,824,859 to 5,826,340
_25765
AO356_25770: AO356_25770 - 3-oxoadipate enol-lactonase, at 5,826,337 to 5,827,170
_25770
AO356_25775: AO356_25775 - peptide synthetase, at 5,827,215 to 5,827,805
_25775
AO356_25780: AO356_25780 - hypothetical protein, at 5,828,011 to 5,829,498
_25780
Position (kb) 5827
5828 Strain fitness (log2 ratio) -1
0
1 at 5826.355 kb on + strand at 5826.428 kb on - strand, within AO356_25770 at 5826.438 kb on + strand, within AO356_25770 at 5826.438 kb on + strand, within AO356_25770 at 5826.438 kb on + strand, within AO356_25770 at 5826.439 kb on - strand, within AO356_25770 at 5826.439 kb on - strand, within AO356_25770 at 5826.584 kb on + strand, within AO356_25770 at 5826.584 kb on + strand, within AO356_25770 at 5826.584 kb on + strand, within AO356_25770 at 5826.611 kb on + strand, within AO356_25770 at 5826.612 kb on - strand, within AO356_25770 at 5826.612 kb on - strand, within AO356_25770 at 5826.692 kb on + strand, within AO356_25770 at 5826.692 kb on + strand, within AO356_25770 at 5827.127 kb on + strand at 5827.128 kb on - strand at 5827.255 kb on + strand at 5827.255 kb on + strand at 5827.255 kb on + strand at 5827.256 kb on - strand at 5827.363 kb on + strand, within AO356_25775 at 5827.363 kb on + strand, within AO356_25775 at 5827.363 kb on + strand, within AO356_25775 at 5827.363 kb on + strand, within AO356_25775 at 5827.364 kb on - strand, within AO356_25775 at 5827.565 kb on - strand, within AO356_25775 at 5827.774 kb on + strand at 5827.774 kb on + strand at 5827.774 kb on + strand at 5827.774 kb on + strand at 5827.775 kb on - strand at 5827.788 kb on - strand at 5827.827 kb on - strand at 5828.068 kb on + strand at 5828.069 kb on - strand at 5828.069 kb on - strand at 5828.269 kb on + strand, within AO356_25780 at 5828.270 kb on - strand, within AO356_25780 at 5828.395 kb on + strand, within AO356_25780 at 5828.396 kb on - strand, within AO356_25780 at 5828.396 kb on - strand, within AO356_25780 at 5828.396 kb on - strand, within AO356_25780 at 5828.396 kb on - strand, within AO356_25780 at 5828.396 kb on - strand, within AO356_25780 at 5828.398 kb on + strand, within AO356_25780 at 5828.399 kb on - strand, within AO356_25780 at 5828.401 kb on + strand, within AO356_25780 at 5828.413 kb on + strand, within AO356_25780 at 5828.413 kb on + strand, within AO356_25780 at 5828.413 kb on + strand, within AO356_25780 at 5828.414 kb on - strand, within AO356_25780 at 5828.486 kb on - strand, within AO356_25780 at 5828.530 kb on + strand, within AO356_25780 at 5828.531 kb on - strand, within AO356_25780 at 5828.531 kb on - strand, within AO356_25780 at 5828.637 kb on + strand, within AO356_25780 at 5828.637 kb on + strand, within AO356_25780
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 5,826,355 + -0.2 5,826,428 - AO356_25770 0.11 +0.4 5,826,438 + AO356_25770 0.12 +0.6 5,826,438 + AO356_25770 0.12 +0.1 5,826,438 + AO356_25770 0.12 -0.7 5,826,439 - AO356_25770 0.12 -1.3 5,826,439 - AO356_25770 0.12 -0.9 5,826,584 + AO356_25770 0.30 -0.1 5,826,584 + AO356_25770 0.30 +0.8 5,826,584 + AO356_25770 0.30 +0.1 5,826,611 + AO356_25770 0.33 -0.7 5,826,612 - AO356_25770 0.33 -0.1 5,826,612 - AO356_25770 0.33 -0.0 5,826,692 + AO356_25770 0.43 +1.2 5,826,692 + AO356_25770 0.43 +0.2 5,827,127 + -0.5 5,827,128 - -0.7 5,827,255 + -0.6 5,827,255 + +0.3 5,827,255 + +0.9 5,827,256 - -0.4 5,827,363 + AO356_25775 0.25 -0.8 5,827,363 + AO356_25775 0.25 -0.5 5,827,363 + AO356_25775 0.25 -1.0 5,827,363 + AO356_25775 0.25 -1.6 5,827,364 - AO356_25775 0.25 -1.5 5,827,565 - AO356_25775 0.59 -0.5 5,827,774 + +0.1 5,827,774 + +0.4 5,827,774 + +0.2 5,827,774 + -1.0 5,827,775 - +0.0 5,827,788 - -0.3 5,827,827 - -0.9 5,828,068 + +0.5 5,828,069 - +0.8 5,828,069 - +0.5 5,828,269 + AO356_25780 0.17 -0.9 5,828,270 - AO356_25780 0.17 +0.1 5,828,395 + AO356_25780 0.26 +0.2 5,828,396 - AO356_25780 0.26 +0.2 5,828,396 - AO356_25780 0.26 +0.1 5,828,396 - AO356_25780 0.26 -0.0 5,828,396 - AO356_25780 0.26 +0.6 5,828,396 - AO356_25780 0.26 -0.1 5,828,398 + AO356_25780 0.26 +0.5 5,828,399 - AO356_25780 0.26 -0.4 5,828,401 + AO356_25780 0.26 +1.1 5,828,413 + AO356_25780 0.27 +0.2 5,828,413 + AO356_25780 0.27 +0.1 5,828,413 + AO356_25780 0.27 +0.1 5,828,414 - AO356_25780 0.27 -0.3 5,828,486 - AO356_25780 0.32 +0.3 5,828,530 + AO356_25780 0.35 +0.2 5,828,531 - AO356_25780 0.35 -0.4 5,828,531 - AO356_25780 0.35 +0.9 5,828,637 + AO356_25780 0.42 +0.2 5,828,637 + AO356_25780 0.42 -0.3
Or see this region's nucleotide sequence