Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22560 and AO356_22565 are separated by 502 nucleotides
AO356_22560: AO356_22560 - hypothetical protein, at 5,043,077 to 5,043,727
_22560
AO356_22565: AO356_22565 - hypothetical protein, at 5,044,230 to 5,044,502
_22565
Position (kb)
5043
5044 Strain fitness (log2 ratio)
-1
0
1
2
3 at 5042.154 kb on + strand at 5042.159 kb on + strand at 5042.159 kb on + strand at 5042.159 kb on + strand at 5042.160 kb on - strand at 5042.192 kb on - strand at 5042.192 kb on - strand at 5042.216 kb on + strand at 5042.246 kb on + strand at 5042.246 kb on + strand at 5042.247 kb on - strand at 5042.290 kb on + strand at 5042.291 kb on - strand at 5042.362 kb on - strand at 5042.362 kb on - strand at 5042.493 kb on - strand at 5042.530 kb on + strand at 5042.531 kb on - strand at 5042.531 kb on - strand at 5042.534 kb on + strand at 5042.535 kb on - strand at 5042.562 kb on + strand at 5042.606 kb on - strand at 5042.606 kb on - strand at 5042.622 kb on - strand at 5042.726 kb on - strand at 5042.726 kb on - strand at 5042.726 kb on - strand at 5042.733 kb on + strand at 5042.769 kb on + strand at 5042.769 kb on + strand at 5042.770 kb on - strand at 5042.770 kb on - strand at 5042.770 kb on - strand at 5042.804 kb on + strand at 5042.805 kb on - strand at 5042.906 kb on + strand at 5042.906 kb on + strand at 5042.907 kb on - strand at 5042.907 kb on - strand at 5042.918 kb on - strand at 5042.940 kb on + strand at 5042.955 kb on + strand at 5042.955 kb on + strand at 5042.956 kb on - strand at 5042.963 kb on + strand at 5042.964 kb on - strand at 5042.964 kb on - strand at 5042.964 kb on - strand at 5043.008 kb on + strand at 5043.008 kb on + strand at 5043.009 kb on - strand at 5043.089 kb on + strand at 5043.223 kb on + strand, within AO356_22560 at 5043.223 kb on + strand, within AO356_22560 at 5043.224 kb on - strand, within AO356_22560 at 5043.224 kb on - strand, within AO356_22560 at 5043.315 kb on + strand, within AO356_22560 at 5043.315 kb on + strand, within AO356_22560 at 5043.329 kb on + strand, within AO356_22560 at 5043.349 kb on + strand, within AO356_22560 at 5043.349 kb on + strand, within AO356_22560 at 5043.350 kb on - strand, within AO356_22560 at 5043.350 kb on - strand, within AO356_22560 at 5043.352 kb on + strand, within AO356_22560 at 5043.353 kb on - strand, within AO356_22560 at 5043.473 kb on + strand, within AO356_22560 at 5043.473 kb on + strand, within AO356_22560 at 5043.473 kb on + strand, within AO356_22560 at 5043.474 kb on - strand, within AO356_22560 at 5043.474 kb on - strand, within AO356_22560 at 5043.479 kb on + strand, within AO356_22560 at 5043.480 kb on - strand, within AO356_22560 at 5043.491 kb on + strand, within AO356_22560 at 5043.560 kb on - strand, within AO356_22560 at 5043.573 kb on + strand, within AO356_22560 at 5043.574 kb on - strand, within AO356_22560 at 5043.574 kb on - strand, within AO356_22560 at 5043.574 kb on - strand, within AO356_22560 at 5043.601 kb on - strand, within AO356_22560 at 5043.601 kb on - strand, within AO356_22560 at 5043.616 kb on + strand, within AO356_22560 at 5043.616 kb on + strand, within AO356_22560 at 5043.616 kb on + strand, within AO356_22560 at 5043.616 kb on + strand, within AO356_22560 at 5043.617 kb on - strand, within AO356_22560 at 5043.617 kb on - strand, within AO356_22560 at 5043.617 kb on - strand, within AO356_22560 at 5043.618 kb on + strand, within AO356_22560 at 5043.618 kb on + strand, within AO356_22560 at 5043.619 kb on - strand, within AO356_22560 at 5043.619 kb on - strand, within AO356_22560 at 5043.635 kb on + strand, within AO356_22560 at 5043.636 kb on - strand, within AO356_22560 at 5043.665 kb on + strand at 5043.665 kb on + strand at 5043.665 kb on + strand at 5043.665 kb on + strand at 5043.665 kb on + strand at 5043.666 kb on - strand at 5043.666 kb on - strand at 5043.669 kb on - strand at 5043.669 kb on - strand at 5043.669 kb on - strand at 5043.708 kb on - strand at 5043.756 kb on + strand at 5043.765 kb on + strand at 5043.765 kb on + strand at 5043.775 kb on + strand at 5043.776 kb on - strand at 5043.776 kb on - strand at 5043.779 kb on + strand at 5043.779 kb on + strand at 5043.779 kb on + strand at 5043.779 kb on + strand at 5043.779 kb on + strand at 5043.779 kb on + strand at 5043.780 kb on - strand at 5043.780 kb on - strand at 5043.780 kb on - strand at 5043.780 kb on - strand at 5043.790 kb on + strand at 5043.791 kb on - strand at 5043.791 kb on - strand at 5043.791 kb on - strand at 5043.791 kb on - strand at 5043.791 kb on - strand at 5043.791 kb on - strand at 5043.791 kb on - strand at 5043.793 kb on - strand at 5043.831 kb on - strand at 5043.872 kb on + strand at 5043.945 kb on + strand at 5043.946 kb on - strand at 5043.949 kb on + strand at 5043.950 kb on - strand at 5043.950 kb on - strand at 5043.950 kb on - strand at 5043.994 kb on - strand at 5043.994 kb on - strand at 5043.994 kb on - strand at 5043.994 kb on - strand at 5044.006 kb on + strand at 5044.053 kb on + strand at 5044.075 kb on + strand at 5044.076 kb on - strand at 5044.085 kb on + strand at 5044.085 kb on + strand at 5044.085 kb on + strand at 5044.086 kb on - strand at 5044.086 kb on - strand at 5044.163 kb on + strand at 5044.164 kb on - strand at 5044.164 kb on - strand at 5044.164 kb on - strand at 5044.164 kb on - strand at 5044.164 kb on - strand at 5044.166 kb on + strand at 5044.166 kb on + strand at 5044.167 kb on - strand at 5044.378 kb on - strand, within AO356_22565 at 5044.378 kb on - strand, within AO356_22565 at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.493 kb on - strand at 5044.493 kb on - strand at 5044.493 kb on - strand at 5044.493 kb on - strand at 5044.493 kb on - strand at 5044.493 kb on - strand at 5044.522 kb on - strand at 5044.531 kb on - strand at 5044.586 kb on + strand at 5044.586 kb on + strand at 5044.586 kb on + strand at 5044.586 kb on + strand at 5044.586 kb on + strand at 5044.587 kb on - strand at 5044.587 kb on - strand at 5044.587 kb on - strand at 5044.636 kb on - strand at 5044.696 kb on + strand at 5044.696 kb on + strand at 5044.697 kb on - strand at 5044.697 kb on - strand at 5044.697 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 5,042,154 + -1.0 5,042,159 + -0.1 5,042,159 + +0.6 5,042,159 + +1.2 5,042,160 - +0.4 5,042,192 - +1.5 5,042,192 - +0.2 5,042,216 + +0.6 5,042,246 + -0.1 5,042,246 + -0.7 5,042,247 - -0.2 5,042,290 + -1.1 5,042,291 - -0.2 5,042,362 - +0.3 5,042,362 - +0.8 5,042,493 - -1.6 5,042,530 + +0.7 5,042,531 - -0.2 5,042,531 - -0.2 5,042,534 + +1.2 5,042,535 - +0.2 5,042,562 + -0.4 5,042,606 - -0.0 5,042,606 - +0.6 5,042,622 - +0.2 5,042,726 - +0.8 5,042,726 - -1.1 5,042,726 - +0.5 5,042,733 + -0.1 5,042,769 + +0.2 5,042,769 + +0.8 5,042,770 - -0.1 5,042,770 - -0.6 5,042,770 - -0.3 5,042,804 + -0.3 5,042,805 - -1.1 5,042,906 + +0.3 5,042,906 + +0.9 5,042,907 - -0.4 5,042,907 - -0.7 5,042,918 - +0.2 5,042,940 + -0.3 5,042,955 + +0.2 5,042,955 + +0.2 5,042,956 - +0.5 5,042,963 + +0.3 5,042,964 - -0.3 5,042,964 - +0.5 5,042,964 - -0.7 5,043,008 + -0.9 5,043,008 + -0.1 5,043,009 - +0.6 5,043,089 + +0.7 5,043,223 + AO356_22560 0.22 +0.6 5,043,223 + AO356_22560 0.22 +0.3 5,043,224 - AO356_22560 0.23 +0.2 5,043,224 - AO356_22560 0.23 +1.0 5,043,315 + AO356_22560 0.37 -0.9 5,043,315 + AO356_22560 0.37 +0.8 5,043,329 + AO356_22560 0.39 +0.8 5,043,349 + AO356_22560 0.42 -0.4 5,043,349 + AO356_22560 0.42 +0.6 5,043,350 - AO356_22560 0.42 +0.6 5,043,350 - AO356_22560 0.42 +1.8 5,043,352 + AO356_22560 0.42 +0.7 5,043,353 - AO356_22560 0.42 -0.3 5,043,473 + AO356_22560 0.61 +0.8 5,043,473 + AO356_22560 0.61 +0.8 5,043,473 + AO356_22560 0.61 +0.2 5,043,474 - AO356_22560 0.61 +1.2 5,043,474 - AO356_22560 0.61 +0.6 5,043,479 + AO356_22560 0.62 +0.9 5,043,480 - AO356_22560 0.62 +0.3 5,043,491 + AO356_22560 0.64 -0.8 5,043,560 - AO356_22560 0.74 -1.6 5,043,573 + AO356_22560 0.76 -1.2 5,043,574 - AO356_22560 0.76 +0.4 5,043,574 - AO356_22560 0.76 +0.8 5,043,574 - AO356_22560 0.76 +0.1 5,043,601 - AO356_22560 0.80 -0.1 5,043,601 - AO356_22560 0.80 -0.8 5,043,616 + AO356_22560 0.83 -0.2 5,043,616 + AO356_22560 0.83 -1.3 5,043,616 + AO356_22560 0.83 +0.6 5,043,616 + AO356_22560 0.83 +0.1 5,043,617 - AO356_22560 0.83 +0.7 5,043,617 - AO356_22560 0.83 +0.5 5,043,617 - AO356_22560 0.83 -0.2 5,043,618 + AO356_22560 0.83 -0.1 5,043,618 + AO356_22560 0.83 -0.0 5,043,619 - AO356_22560 0.83 +0.3 5,043,619 - AO356_22560 0.83 +0.2 5,043,635 + AO356_22560 0.86 -0.2 5,043,636 - AO356_22560 0.86 +0.4 5,043,665 + +0.4 5,043,665 + +1.2 5,043,665 + -1.3 5,043,665 + -0.3 5,043,665 + +0.6 5,043,666 - +0.4 5,043,666 - +0.1 5,043,669 - +1.2 5,043,669 - -0.1 5,043,669 - -0.3 5,043,708 - -0.4 5,043,756 + +1.3 5,043,765 + +0.1 5,043,765 + +0.8 5,043,775 + +0.7 5,043,776 - -1.1 5,043,776 - +0.3 5,043,779 + -0.8 5,043,779 + -0.8 5,043,779 + +0.5 5,043,779 + -0.3 5,043,779 + -1.1 5,043,779 + -0.8 5,043,780 - +0.6 5,043,780 - +0.6 5,043,780 - +0.4 5,043,780 - -0.4 5,043,790 + +0.2 5,043,791 - -0.3 5,043,791 - +0.3 5,043,791 - -0.2 5,043,791 - +0.0 5,043,791 - +0.6 5,043,791 - +0.4 5,043,791 - -0.4 5,043,793 - +0.4 5,043,831 - +0.2 5,043,872 + +0.5 5,043,945 + +0.5 5,043,946 - -0.1 5,043,949 + -1.3 5,043,950 - +0.8 5,043,950 - +0.2 5,043,950 - +0.2 5,043,994 - -0.1 5,043,994 - -0.8 5,043,994 - -0.8 5,043,994 - +0.5 5,044,006 + +1.6 5,044,053 + +0.7 5,044,075 + -0.5 5,044,076 - -1.3 5,044,085 + -1.0 5,044,085 + -0.0 5,044,085 + -0.1 5,044,086 - +0.0 5,044,086 - +0.6 5,044,163 + -0.4 5,044,164 - +0.4 5,044,164 - -0.7 5,044,164 - -0.2 5,044,164 - -0.1 5,044,164 - -0.8 5,044,166 + -1.6 5,044,166 + -0.4 5,044,167 - -1.0 5,044,378 - AO356_22565 0.54 +0.1 5,044,378 - AO356_22565 0.54 -0.6 5,044,492 + +0.1 5,044,492 + +1.7 5,044,492 + +3.1 5,044,492 + +0.7 5,044,492 + -0.2 5,044,492 + -0.4 5,044,492 + -0.3 5,044,492 + +1.0 5,044,492 + +0.5 5,044,493 - -1.1 5,044,493 - +0.2 5,044,493 - -0.0 5,044,493 - -1.1 5,044,493 - +0.4 5,044,493 - +0.2 5,044,522 - +0.3 5,044,531 - +1.1 5,044,586 + +0.5 5,044,586 + -0.2 5,044,586 + +0.4 5,044,586 + -1.2 5,044,586 + +0.3 5,044,587 - +0.4 5,044,587 - -0.5 5,044,587 - -1.0 5,044,636 - +0.7 5,044,696 + +0.4 5,044,696 + +1.2 5,044,697 - +0.5 5,044,697 - +1.1 5,044,697 - -0.1
Or see this region's nucleotide sequence