Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22545 and AO356_22550 are separated by 19 nucleotides AO356_22550 and AO356_22555 are separated by 274 nucleotides
AO356_22545: AO356_22545 - LysR family transcriptional regulator, at 5,038,179 to 5,039,117
_22545
AO356_22550: AO356_22550 - hypothetical protein, at 5,039,137 to 5,039,598
_22550
AO356_22555: AO356_22555 - chloroperoxidase, at 5,039,873 to 5,040,559
_22555
Position (kb)
5039
5040
5041 Strain fitness (log2 ratio)
-2
-1
0
1 at 5038.991 kb on - strand, within AO356_22545 at 5039.115 kb on + strand at 5039.275 kb on + strand, within AO356_22550 at 5039.276 kb on - strand, within AO356_22550 at 5039.309 kb on + strand, within AO356_22550 at 5039.310 kb on - strand, within AO356_22550 at 5039.310 kb on - strand, within AO356_22550 at 5039.310 kb on - strand, within AO356_22550 at 5039.310 kb on - strand, within AO356_22550 at 5039.349 kb on - strand, within AO356_22550 at 5039.378 kb on + strand, within AO356_22550 at 5039.379 kb on - strand, within AO356_22550 at 5039.452 kb on + strand, within AO356_22550 at 5039.493 kb on + strand, within AO356_22550 at 5039.493 kb on + strand, within AO356_22550 at 5039.494 kb on - strand, within AO356_22550 at 5039.494 kb on - strand, within AO356_22550 at 5039.495 kb on + strand, within AO356_22550 at 5039.495 kb on + strand, within AO356_22550 at 5039.495 kb on + strand, within AO356_22550 at 5039.495 kb on + strand, within AO356_22550 at 5039.495 kb on + strand, within AO356_22550 at 5039.495 kb on + strand, within AO356_22550 at 5039.495 kb on + strand, within AO356_22550 at 5039.495 kb on + strand, within AO356_22550 at 5039.496 kb on - strand, within AO356_22550 at 5039.496 kb on - strand, within AO356_22550 at 5039.496 kb on - strand, within AO356_22550 at 5039.496 kb on - strand, within AO356_22550 at 5039.496 kb on - strand, within AO356_22550 at 5039.496 kb on - strand, within AO356_22550 at 5039.496 kb on - strand, within AO356_22550 at 5039.496 kb on - strand, within AO356_22550 at 5039.496 kb on - strand, within AO356_22550 at 5039.534 kb on + strand, within AO356_22550 at 5039.535 kb on - strand, within AO356_22550 at 5039.535 kb on - strand, within AO356_22550 at 5039.562 kb on - strand at 5039.665 kb on + strand at 5039.665 kb on + strand at 5039.665 kb on + strand at 5039.666 kb on - strand at 5039.860 kb on - strand at 5039.895 kb on + strand at 5039.896 kb on - strand at 5040.061 kb on + strand, within AO356_22555 at 5040.061 kb on + strand, within AO356_22555 at 5040.080 kb on + strand, within AO356_22555 at 5040.081 kb on - strand, within AO356_22555 at 5040.090 kb on + strand, within AO356_22555 at 5040.091 kb on - strand, within AO356_22555 at 5040.201 kb on + strand, within AO356_22555 at 5040.202 kb on - strand, within AO356_22555 at 5040.202 kb on - strand, within AO356_22555 at 5040.202 kb on - strand, within AO356_22555 at 5040.226 kb on + strand, within AO356_22555 at 5040.226 kb on + strand, within AO356_22555 at 5040.226 kb on + strand, within AO356_22555 at 5040.227 kb on - strand, within AO356_22555 at 5040.227 kb on - strand, within AO356_22555 at 5040.227 kb on - strand, within AO356_22555 at 5040.227 kb on - strand, within AO356_22555 at 5040.229 kb on + strand, within AO356_22555 at 5040.229 kb on + strand, within AO356_22555 at 5040.230 kb on - strand, within AO356_22555 at 5040.230 kb on - strand, within AO356_22555 at 5040.275 kb on + strand, within AO356_22555 at 5040.275 kb on + strand, within AO356_22555 at 5040.276 kb on - strand, within AO356_22555 at 5040.276 kb on - strand, within AO356_22555 at 5040.276 kb on - strand, within AO356_22555 at 5040.276 kb on - strand, within AO356_22555 at 5040.276 kb on - strand, within AO356_22555 at 5040.419 kb on + strand, within AO356_22555 at 5040.419 kb on + strand, within AO356_22555 at 5040.420 kb on - strand, within AO356_22555 at 5040.420 kb on - strand, within AO356_22555 at 5040.462 kb on - strand, within AO356_22555 at 5040.462 kb on - strand, within AO356_22555 at 5040.485 kb on + strand, within AO356_22555 at 5040.485 kb on + strand, within AO356_22555 at 5040.485 kb on + strand, within AO356_22555 at 5040.486 kb on - strand, within AO356_22555 at 5040.486 kb on - strand, within AO356_22555 at 5040.486 kb on - strand, within AO356_22555 at 5040.486 kb on - strand, within AO356_22555 at 5040.486 kb on - strand, within AO356_22555 at 5040.486 kb on - strand, within AO356_22555 at 5040.486 kb on - strand, within AO356_22555 at 5040.516 kb on + strand at 5040.517 kb on - strand at 5040.577 kb on + strand at 5040.577 kb on + strand at 5040.578 kb on - strand at 5040.578 kb on - strand at 5040.578 kb on - strand at 5040.578 kb on - strand at 5040.632 kb on + strand at 5040.632 kb on + strand at 5040.632 kb on + strand at 5040.632 kb on + strand at 5040.632 kb on + strand at 5040.632 kb on + strand at 5040.633 kb on - strand at 5040.633 kb on - strand at 5040.633 kb on - strand at 5040.649 kb on + strand at 5040.682 kb on - strand at 5040.682 kb on - strand at 5040.682 kb on - strand at 5040.682 kb on - strand at 5040.781 kb on + strand at 5040.782 kb on - strand at 5040.782 kb on - strand at 5040.792 kb on + strand at 5040.792 kb on + strand at 5040.793 kb on - strand at 5040.793 kb on - strand at 5040.874 kb on + strand at 5040.875 kb on - strand at 5040.875 kb on - strand at 5040.875 kb on - strand at 5040.939 kb on + strand at 5040.939 kb on + strand at 5040.939 kb on + strand at 5040.940 kb on - strand at 5040.940 kb on - strand at 5040.940 kb on - strand at 5040.940 kb on - strand at 5040.940 kb on - strand at 5040.991 kb on - strand at 5040.991 kb on - strand at 5041.072 kb on + strand at 5041.072 kb on + strand at 5041.072 kb on + strand at 5041.073 kb on - strand at 5041.073 kb on - strand at 5041.129 kb on - strand at 5041.129 kb on - strand at 5041.134 kb on + strand at 5041.134 kb on + strand at 5041.156 kb on + strand at 5041.157 kb on - strand at 5041.157 kb on - strand at 5041.167 kb on - strand at 5041.250 kb on + strand at 5041.250 kb on + strand at 5041.291 kb on + strand at 5041.345 kb on - strand at 5041.449 kb on + strand at 5041.463 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 5,038,991 - AO356_22545 0.86 -0.1 5,039,115 + -0.0 5,039,275 + AO356_22550 0.30 -0.1 5,039,276 - AO356_22550 0.30 -0.4 5,039,309 + AO356_22550 0.37 -0.4 5,039,310 - AO356_22550 0.37 +0.7 5,039,310 - AO356_22550 0.37 +0.2 5,039,310 - AO356_22550 0.37 -0.6 5,039,310 - AO356_22550 0.37 +0.1 5,039,349 - AO356_22550 0.46 -0.5 5,039,378 + AO356_22550 0.52 +0.7 5,039,379 - AO356_22550 0.52 +0.8 5,039,452 + AO356_22550 0.68 -0.3 5,039,493 + AO356_22550 0.77 +1.7 5,039,493 + AO356_22550 0.77 +0.3 5,039,494 - AO356_22550 0.77 -0.1 5,039,494 - AO356_22550 0.77 -0.2 5,039,495 + AO356_22550 0.77 +0.0 5,039,495 + AO356_22550 0.77 +0.2 5,039,495 + AO356_22550 0.77 -0.0 5,039,495 + AO356_22550 0.77 +1.2 5,039,495 + AO356_22550 0.77 +0.0 5,039,495 + AO356_22550 0.77 -1.8 5,039,495 + AO356_22550 0.77 -0.1 5,039,495 + AO356_22550 0.77 +1.0 5,039,496 - AO356_22550 0.78 +1.2 5,039,496 - AO356_22550 0.78 -0.2 5,039,496 - AO356_22550 0.78 -0.8 5,039,496 - AO356_22550 0.78 +0.7 5,039,496 - AO356_22550 0.78 -0.5 5,039,496 - AO356_22550 0.78 +0.3 5,039,496 - AO356_22550 0.78 +1.0 5,039,496 - AO356_22550 0.78 +1.4 5,039,496 - AO356_22550 0.78 +0.6 5,039,534 + AO356_22550 0.86 -0.6 5,039,535 - AO356_22550 0.86 +0.0 5,039,535 - AO356_22550 0.86 -0.7 5,039,562 - -0.2 5,039,665 + -0.1 5,039,665 + +1.1 5,039,665 + -0.4 5,039,666 - +0.9 5,039,860 - -0.3 5,039,895 + -1.5 5,039,896 - +0.4 5,040,061 + AO356_22555 0.27 +0.1 5,040,061 + AO356_22555 0.27 +1.0 5,040,080 + AO356_22555 0.30 +1.0 5,040,081 - AO356_22555 0.30 -1.4 5,040,090 + AO356_22555 0.32 +1.3 5,040,091 - AO356_22555 0.32 +0.4 5,040,201 + AO356_22555 0.48 -0.3 5,040,202 - AO356_22555 0.48 -0.4 5,040,202 - AO356_22555 0.48 +0.6 5,040,202 - AO356_22555 0.48 +0.2 5,040,226 + AO356_22555 0.51 -0.3 5,040,226 + AO356_22555 0.51 +1.6 5,040,226 + AO356_22555 0.51 +0.3 5,040,227 - AO356_22555 0.52 +0.4 5,040,227 - AO356_22555 0.52 -0.9 5,040,227 - AO356_22555 0.52 -0.5 5,040,227 - AO356_22555 0.52 +0.8 5,040,229 + AO356_22555 0.52 +0.6 5,040,229 + AO356_22555 0.52 -0.1 5,040,230 - AO356_22555 0.52 -0.6 5,040,230 - AO356_22555 0.52 +0.1 5,040,275 + AO356_22555 0.59 +0.0 5,040,275 + AO356_22555 0.59 +0.2 5,040,276 - AO356_22555 0.59 +0.5 5,040,276 - AO356_22555 0.59 -0.1 5,040,276 - AO356_22555 0.59 +0.8 5,040,276 - AO356_22555 0.59 -0.1 5,040,276 - AO356_22555 0.59 -0.5 5,040,419 + AO356_22555 0.79 +0.6 5,040,419 + AO356_22555 0.79 +0.2 5,040,420 - AO356_22555 0.80 -1.8 5,040,420 - AO356_22555 0.80 +0.6 5,040,462 - AO356_22555 0.86 +1.2 5,040,462 - AO356_22555 0.86 -0.5 5,040,485 + AO356_22555 0.89 +0.0 5,040,485 + AO356_22555 0.89 -0.5 5,040,485 + AO356_22555 0.89 -0.6 5,040,486 - AO356_22555 0.89 -1.2 5,040,486 - AO356_22555 0.89 -0.6 5,040,486 - AO356_22555 0.89 -0.3 5,040,486 - AO356_22555 0.89 -0.6 5,040,486 - AO356_22555 0.89 +0.7 5,040,486 - AO356_22555 0.89 +0.3 5,040,486 - AO356_22555 0.89 -0.4 5,040,516 + -2.4 5,040,517 - -0.6 5,040,577 + +0.4 5,040,577 + +0.2 5,040,578 - -0.4 5,040,578 - -0.3 5,040,578 - +0.9 5,040,578 - -0.0 5,040,632 + -0.6 5,040,632 + -1.1 5,040,632 + +0.7 5,040,632 + -0.0 5,040,632 + +0.9 5,040,632 + +0.0 5,040,633 - -0.2 5,040,633 - +0.4 5,040,633 - -0.6 5,040,649 + -0.0 5,040,682 - -2.1 5,040,682 - -1.7 5,040,682 - -1.1 5,040,682 - -0.5 5,040,781 + +1.0 5,040,782 - -0.6 5,040,782 - -0.0 5,040,792 + +0.1 5,040,792 + +0.7 5,040,793 - -0.4 5,040,793 - -1.8 5,040,874 + -0.0 5,040,875 - -0.0 5,040,875 - -0.1 5,040,875 - +0.7 5,040,939 + -0.0 5,040,939 + +0.9 5,040,939 + +1.3 5,040,940 - +0.5 5,040,940 - +0.9 5,040,940 - +0.7 5,040,940 - +0.7 5,040,940 - -0.0 5,040,991 - +0.0 5,040,991 - +0.3 5,041,072 + -0.4 5,041,072 + -0.9 5,041,072 + -0.4 5,041,073 - +0.3 5,041,073 - +0.9 5,041,129 - -0.1 5,041,129 - +0.4 5,041,134 + -1.0 5,041,134 + +0.3 5,041,156 + +1.0 5,041,157 - -0.1 5,041,157 - +0.9 5,041,167 - +0.9 5,041,250 + +0.5 5,041,250 + +1.1 5,041,291 + +0.0 5,041,345 - +1.4 5,041,449 + -0.2 5,041,463 + +1.3
Or see this region's nucleotide sequence