Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22535 and AO356_22540 are separated by 223 nucleotides AO356_22540 and AO356_22545 are separated by 297 nucleotides AO356_22545 and AO356_22550 are separated by 19 nucleotides AO356_22550 and AO356_22555 are separated by 274 nucleotides
AO356_22535: AO356_22535 - ketosteroid isomerase, at 5,036,948 to 5,037,352
_22535
AO356_22540: AO356_22540 - NIPSNAP family containing protein, at 5,037,576 to 5,037,881
_22540
AO356_22545: AO356_22545 - LysR family transcriptional regulator, at 5,038,179 to 5,039,117
_22545
AO356_22550: AO356_22550 - hypothetical protein, at 5,039,137 to 5,039,598
_22550
AO356_22555: AO356_22555 - chloroperoxidase, at 5,039,873 to 5,040,559
_22555
Position (kb)
5038
5039
5040 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5037.205 kb on - strand, within AO356_22535 at 5037.205 kb on - strand, within AO356_22535 at 5037.236 kb on + strand, within AO356_22535 at 5037.237 kb on - strand, within AO356_22535 at 5037.248 kb on + strand, within AO356_22535 at 5037.248 kb on + strand, within AO356_22535 at 5037.248 kb on + strand, within AO356_22535 at 5037.248 kb on + strand, within AO356_22535 at 5037.248 kb on + strand, within AO356_22535 at 5037.248 kb on + strand, within AO356_22535 at 5037.248 kb on + strand, within AO356_22535 at 5037.248 kb on + strand, within AO356_22535 at 5037.248 kb on + strand, within AO356_22535 at 5037.248 kb on + strand, within AO356_22535 at 5037.248 kb on + strand, within AO356_22535 at 5037.248 kb on + strand, within AO356_22535 at 5037.249 kb on - strand, within AO356_22535 at 5037.249 kb on - strand, within AO356_22535 at 5037.249 kb on - strand, within AO356_22535 at 5037.249 kb on - strand, within AO356_22535 at 5037.249 kb on - strand, within AO356_22535 at 5037.261 kb on + strand, within AO356_22535 at 5037.356 kb on + strand at 5037.357 kb on - strand at 5037.537 kb on + strand at 5037.538 kb on - strand at 5037.538 kb on - strand at 5037.538 kb on - strand at 5037.538 kb on - strand at 5037.538 kb on - strand at 5037.538 kb on - strand at 5037.558 kb on - strand at 5037.597 kb on + strand at 5037.597 kb on + strand at 5037.597 kb on + strand at 5037.598 kb on - strand at 5037.598 kb on - strand at 5037.598 kb on - strand at 5037.598 kb on - strand at 5037.598 kb on - strand at 5037.601 kb on + strand at 5037.601 kb on + strand at 5037.601 kb on + strand at 5037.601 kb on + strand at 5037.602 kb on - strand at 5037.602 kb on - strand at 5037.602 kb on - strand at 5037.602 kb on - strand at 5037.602 kb on - strand at 5037.636 kb on + strand, within AO356_22540 at 5037.636 kb on + strand, within AO356_22540 at 5037.637 kb on - strand, within AO356_22540 at 5037.668 kb on + strand, within AO356_22540 at 5037.669 kb on - strand, within AO356_22540 at 5037.691 kb on - strand, within AO356_22540 at 5037.691 kb on - strand, within AO356_22540 at 5037.691 kb on - strand, within AO356_22540 at 5037.691 kb on - strand, within AO356_22540 at 5037.726 kb on + strand, within AO356_22540 at 5037.726 kb on + strand, within AO356_22540 at 5037.727 kb on - strand, within AO356_22540 at 5037.760 kb on - strand, within AO356_22540 at 5037.760 kb on - strand, within AO356_22540 at 5037.769 kb on - strand, within AO356_22540 at 5037.788 kb on - strand, within AO356_22540 at 5037.847 kb on - strand, within AO356_22540 at 5037.847 kb on - strand, within AO356_22540 at 5037.847 kb on - strand, within AO356_22540 at 5037.956 kb on - strand at 5037.979 kb on + strand at 5037.979 kb on + strand at 5037.980 kb on - strand at 5037.980 kb on - strand at 5038.015 kb on + strand at 5038.015 kb on + strand at 5038.015 kb on + strand at 5038.016 kb on - strand at 5038.016 kb on - strand at 5038.079 kb on + strand at 5038.079 kb on + strand at 5038.080 kb on - strand at 5038.080 kb on - strand at 5038.116 kb on + strand at 5038.116 kb on + strand at 5038.116 kb on + strand at 5038.116 kb on + strand at 5038.116 kb on + strand at 5038.117 kb on - strand at 5038.123 kb on + strand at 5038.123 kb on + strand at 5038.123 kb on + strand at 5038.124 kb on - strand at 5038.124 kb on - strand at 5038.124 kb on - strand at 5038.124 kb on - strand at 5038.154 kb on + strand at 5038.155 kb on - strand at 5038.155 kb on - strand at 5038.216 kb on + strand at 5038.217 kb on - strand at 5038.217 kb on - strand at 5038.309 kb on + strand, within AO356_22545 at 5038.309 kb on + strand, within AO356_22545 at 5038.309 kb on + strand, within AO356_22545 at 5038.310 kb on - strand, within AO356_22545 at 5038.310 kb on - strand, within AO356_22545 at 5038.310 kb on - strand, within AO356_22545 at 5038.310 kb on - strand, within AO356_22545 at 5038.310 kb on - strand, within AO356_22545 at 5038.310 kb on - strand, within AO356_22545 at 5038.310 kb on - strand, within AO356_22545 at 5038.386 kb on + strand, within AO356_22545 at 5038.386 kb on + strand, within AO356_22545 at 5038.387 kb on - strand, within AO356_22545 at 5038.409 kb on - strand, within AO356_22545 at 5038.451 kb on + strand, within AO356_22545 at 5038.533 kb on + strand, within AO356_22545 at 5038.533 kb on + strand, within AO356_22545 at 5038.533 kb on + strand, within AO356_22545 at 5038.533 kb on + strand, within AO356_22545 at 5038.533 kb on + strand, within AO356_22545 at 5038.534 kb on - strand, within AO356_22545 at 5038.547 kb on + strand, within AO356_22545 at 5038.547 kb on + strand, within AO356_22545 at 5038.547 kb on + strand, within AO356_22545 at 5038.547 kb on + strand, within AO356_22545 at 5038.548 kb on - strand, within AO356_22545 at 5038.548 kb on - strand, within AO356_22545 at 5038.548 kb on - strand, within AO356_22545 at 5038.594 kb on + strand, within AO356_22545 at 5038.594 kb on + strand, within AO356_22545 at 5038.595 kb on - strand, within AO356_22545 at 5038.595 kb on - strand, within AO356_22545 at 5038.595 kb on - strand, within AO356_22545 at 5038.641 kb on - strand, within AO356_22545 at 5038.661 kb on + strand, within AO356_22545 at 5038.661 kb on + strand, within AO356_22545 at 5038.662 kb on - strand, within AO356_22545 at 5038.662 kb on - strand, within AO356_22545 at 5038.728 kb on - strand, within AO356_22545 at 5038.779 kb on + strand, within AO356_22545 at 5038.779 kb on + strand, within AO356_22545 at 5038.780 kb on - strand, within AO356_22545 at 5038.780 kb on - strand, within AO356_22545 at 5038.793 kb on - strand, within AO356_22545 at 5038.815 kb on + strand, within AO356_22545 at 5038.815 kb on + strand, within AO356_22545 at 5038.816 kb on - strand, within AO356_22545 at 5038.816 kb on - strand, within AO356_22545 at 5038.816 kb on - strand, within AO356_22545 at 5038.816 kb on - strand, within AO356_22545 at 5038.816 kb on - strand, within AO356_22545 at 5038.816 kb on - strand, within AO356_22545 at 5038.816 kb on - strand, within AO356_22545 at 5038.823 kb on + strand, within AO356_22545 at 5038.823 kb on + strand, within AO356_22545 at 5038.856 kb on + strand, within AO356_22545 at 5038.991 kb on - strand, within AO356_22545 at 5039.115 kb on + strand at 5039.275 kb on + strand, within AO356_22550 at 5039.276 kb on - strand, within AO356_22550 at 5039.309 kb on + strand, within AO356_22550 at 5039.310 kb on - strand, within AO356_22550 at 5039.310 kb on - strand, within AO356_22550 at 5039.310 kb on - strand, within AO356_22550 at 5039.310 kb on - strand, within AO356_22550 at 5039.349 kb on - strand, within AO356_22550 at 5039.378 kb on + strand, within AO356_22550 at 5039.379 kb on - strand, within AO356_22550 at 5039.452 kb on + strand, within AO356_22550 at 5039.493 kb on + strand, within AO356_22550 at 5039.493 kb on + strand, within AO356_22550 at 5039.494 kb on - strand, within AO356_22550 at 5039.494 kb on - strand, within AO356_22550 at 5039.495 kb on + strand, within AO356_22550 at 5039.495 kb on + strand, within AO356_22550 at 5039.495 kb on + strand, within AO356_22550 at 5039.495 kb on + strand, within AO356_22550 at 5039.495 kb on + strand, within AO356_22550 at 5039.495 kb on + strand, within AO356_22550 at 5039.495 kb on + strand, within AO356_22550 at 5039.495 kb on + strand, within AO356_22550 at 5039.496 kb on - strand, within AO356_22550 at 5039.496 kb on - strand, within AO356_22550 at 5039.496 kb on - strand, within AO356_22550 at 5039.496 kb on - strand, within AO356_22550 at 5039.496 kb on - strand, within AO356_22550 at 5039.496 kb on - strand, within AO356_22550 at 5039.496 kb on - strand, within AO356_22550 at 5039.496 kb on - strand, within AO356_22550 at 5039.496 kb on - strand, within AO356_22550 at 5039.534 kb on + strand, within AO356_22550 at 5039.535 kb on - strand, within AO356_22550 at 5039.535 kb on - strand, within AO356_22550 at 5039.562 kb on - strand at 5039.665 kb on + strand at 5039.665 kb on + strand at 5039.665 kb on + strand at 5039.666 kb on - strand at 5039.860 kb on - strand at 5039.895 kb on + strand at 5039.896 kb on - strand at 5040.061 kb on + strand, within AO356_22555 at 5040.061 kb on + strand, within AO356_22555 at 5040.080 kb on + strand, within AO356_22555 at 5040.081 kb on - strand, within AO356_22555 at 5040.090 kb on + strand, within AO356_22555 at 5040.091 kb on - strand, within AO356_22555
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 5,037,205 - AO356_22535 0.63 -0.1 5,037,205 - AO356_22535 0.63 -2.5 5,037,236 + AO356_22535 0.71 +0.2 5,037,237 - AO356_22535 0.71 -0.3 5,037,248 + AO356_22535 0.74 +0.7 5,037,248 + AO356_22535 0.74 +0.6 5,037,248 + AO356_22535 0.74 -0.2 5,037,248 + AO356_22535 0.74 -0.3 5,037,248 + AO356_22535 0.74 -0.3 5,037,248 + AO356_22535 0.74 +0.2 5,037,248 + AO356_22535 0.74 -1.4 5,037,248 + AO356_22535 0.74 -0.0 5,037,248 + AO356_22535 0.74 -0.5 5,037,248 + AO356_22535 0.74 +0.0 5,037,248 + AO356_22535 0.74 +0.5 5,037,248 + AO356_22535 0.74 -0.1 5,037,249 - AO356_22535 0.74 +0.0 5,037,249 - AO356_22535 0.74 +0.3 5,037,249 - AO356_22535 0.74 +1.8 5,037,249 - AO356_22535 0.74 +1.6 5,037,249 - AO356_22535 0.74 -1.7 5,037,261 + AO356_22535 0.77 +0.2 5,037,356 + -0.4 5,037,357 - +0.5 5,037,537 + +1.1 5,037,538 - +0.4 5,037,538 - +0.6 5,037,538 - -0.2 5,037,538 - +1.8 5,037,538 - +0.8 5,037,538 - +0.6 5,037,558 - -0.2 5,037,597 + -0.4 5,037,597 + +1.6 5,037,597 + -0.4 5,037,598 - +0.5 5,037,598 - -0.8 5,037,598 - -0.1 5,037,598 - +0.1 5,037,598 - +0.2 5,037,601 + +1.4 5,037,601 + -0.5 5,037,601 + -0.5 5,037,601 + +0.1 5,037,602 - -0.3 5,037,602 - +1.4 5,037,602 - -0.5 5,037,602 - +0.7 5,037,602 - -2.1 5,037,636 + AO356_22540 0.20 +1.6 5,037,636 + AO356_22540 0.20 +0.9 5,037,637 - AO356_22540 0.20 +0.5 5,037,668 + AO356_22540 0.30 +0.3 5,037,669 - AO356_22540 0.30 +0.4 5,037,691 - AO356_22540 0.38 +0.4 5,037,691 - AO356_22540 0.38 +0.6 5,037,691 - AO356_22540 0.38 -1.1 5,037,691 - AO356_22540 0.38 +0.8 5,037,726 + AO356_22540 0.49 +0.9 5,037,726 + AO356_22540 0.49 -0.7 5,037,727 - AO356_22540 0.49 -0.1 5,037,760 - AO356_22540 0.60 +0.4 5,037,760 - AO356_22540 0.60 +0.1 5,037,769 - AO356_22540 0.63 +0.1 5,037,788 - AO356_22540 0.69 +0.6 5,037,847 - AO356_22540 0.89 -0.5 5,037,847 - AO356_22540 0.89 +0.4 5,037,847 - AO356_22540 0.89 +0.2 5,037,956 - -1.8 5,037,979 + -0.1 5,037,979 + +0.2 5,037,980 - +1.5 5,037,980 - -0.1 5,038,015 + -1.3 5,038,015 + +1.4 5,038,015 + +0.2 5,038,016 - -0.9 5,038,016 - -0.5 5,038,079 + +0.2 5,038,079 + +0.1 5,038,080 - +0.9 5,038,080 - -0.6 5,038,116 + +0.7 5,038,116 + -2.5 5,038,116 + +0.6 5,038,116 + +0.2 5,038,116 + +0.6 5,038,117 - +0.7 5,038,123 + -1.3 5,038,123 + +1.1 5,038,123 + +0.6 5,038,124 - +0.3 5,038,124 - +0.2 5,038,124 - +0.5 5,038,124 - -0.5 5,038,154 + +0.9 5,038,155 - +1.0 5,038,155 - -0.9 5,038,216 + -0.0 5,038,217 - +0.9 5,038,217 - +0.2 5,038,309 + AO356_22545 0.14 -0.6 5,038,309 + AO356_22545 0.14 +0.2 5,038,309 + AO356_22545 0.14 -1.1 5,038,310 - AO356_22545 0.14 +0.6 5,038,310 - AO356_22545 0.14 -1.1 5,038,310 - AO356_22545 0.14 -2.1 5,038,310 - AO356_22545 0.14 +1.2 5,038,310 - AO356_22545 0.14 -0.6 5,038,310 - AO356_22545 0.14 -0.9 5,038,310 - AO356_22545 0.14 -1.6 5,038,386 + AO356_22545 0.22 +0.4 5,038,386 + AO356_22545 0.22 -0.0 5,038,387 - AO356_22545 0.22 -0.2 5,038,409 - AO356_22545 0.24 -0.5 5,038,451 + AO356_22545 0.29 +0.7 5,038,533 + AO356_22545 0.38 +0.8 5,038,533 + AO356_22545 0.38 -0.1 5,038,533 + AO356_22545 0.38 +0.6 5,038,533 + AO356_22545 0.38 +1.3 5,038,533 + AO356_22545 0.38 -0.7 5,038,534 - AO356_22545 0.38 +0.6 5,038,547 + AO356_22545 0.39 +1.1 5,038,547 + AO356_22545 0.39 +1.3 5,038,547 + AO356_22545 0.39 +0.1 5,038,547 + AO356_22545 0.39 +0.5 5,038,548 - AO356_22545 0.39 +0.1 5,038,548 - AO356_22545 0.39 -0.2 5,038,548 - AO356_22545 0.39 +0.3 5,038,594 + AO356_22545 0.44 +0.7 5,038,594 + AO356_22545 0.44 +0.1 5,038,595 - AO356_22545 0.44 +0.1 5,038,595 - AO356_22545 0.44 -0.0 5,038,595 - AO356_22545 0.44 +0.4 5,038,641 - AO356_22545 0.49 -0.1 5,038,661 + AO356_22545 0.51 +1.7 5,038,661 + AO356_22545 0.51 -0.2 5,038,662 - AO356_22545 0.51 +0.9 5,038,662 - AO356_22545 0.51 -0.1 5,038,728 - AO356_22545 0.58 +0.3 5,038,779 + AO356_22545 0.64 +0.3 5,038,779 + AO356_22545 0.64 -0.1 5,038,780 - AO356_22545 0.64 +0.2 5,038,780 - AO356_22545 0.64 -0.8 5,038,793 - AO356_22545 0.65 +0.3 5,038,815 + AO356_22545 0.68 -0.4 5,038,815 + AO356_22545 0.68 -0.3 5,038,816 - AO356_22545 0.68 +0.8 5,038,816 - AO356_22545 0.68 +1.3 5,038,816 - AO356_22545 0.68 +0.3 5,038,816 - AO356_22545 0.68 +0.5 5,038,816 - AO356_22545 0.68 +0.8 5,038,816 - AO356_22545 0.68 +1.1 5,038,816 - AO356_22545 0.68 -0.2 5,038,823 + AO356_22545 0.69 -1.9 5,038,823 + AO356_22545 0.69 -1.0 5,038,856 + AO356_22545 0.72 -0.7 5,038,991 - AO356_22545 0.86 -0.1 5,039,115 + -0.0 5,039,275 + AO356_22550 0.30 -0.1 5,039,276 - AO356_22550 0.30 -0.4 5,039,309 + AO356_22550 0.37 -0.4 5,039,310 - AO356_22550 0.37 +0.7 5,039,310 - AO356_22550 0.37 +0.2 5,039,310 - AO356_22550 0.37 -0.6 5,039,310 - AO356_22550 0.37 +0.1 5,039,349 - AO356_22550 0.46 -0.5 5,039,378 + AO356_22550 0.52 +0.7 5,039,379 - AO356_22550 0.52 +0.8 5,039,452 + AO356_22550 0.68 -0.3 5,039,493 + AO356_22550 0.77 +1.7 5,039,493 + AO356_22550 0.77 +0.3 5,039,494 - AO356_22550 0.77 -0.1 5,039,494 - AO356_22550 0.77 -0.2 5,039,495 + AO356_22550 0.77 +0.0 5,039,495 + AO356_22550 0.77 +0.2 5,039,495 + AO356_22550 0.77 -0.0 5,039,495 + AO356_22550 0.77 +1.2 5,039,495 + AO356_22550 0.77 +0.0 5,039,495 + AO356_22550 0.77 -1.8 5,039,495 + AO356_22550 0.77 -0.1 5,039,495 + AO356_22550 0.77 +1.0 5,039,496 - AO356_22550 0.78 +1.2 5,039,496 - AO356_22550 0.78 -0.2 5,039,496 - AO356_22550 0.78 -0.8 5,039,496 - AO356_22550 0.78 +0.7 5,039,496 - AO356_22550 0.78 -0.5 5,039,496 - AO356_22550 0.78 +0.3 5,039,496 - AO356_22550 0.78 +1.0 5,039,496 - AO356_22550 0.78 +1.4 5,039,496 - AO356_22550 0.78 +0.6 5,039,534 + AO356_22550 0.86 -0.6 5,039,535 - AO356_22550 0.86 +0.0 5,039,535 - AO356_22550 0.86 -0.7 5,039,562 - -0.2 5,039,665 + -0.1 5,039,665 + +1.1 5,039,665 + -0.4 5,039,666 - +0.9 5,039,860 - -0.3 5,039,895 + -1.5 5,039,896 - +0.4 5,040,061 + AO356_22555 0.27 +0.1 5,040,061 + AO356_22555 0.27 +1.0 5,040,080 + AO356_22555 0.30 +1.0 5,040,081 - AO356_22555 0.30 -1.4 5,040,090 + AO356_22555 0.32 +1.3 5,040,091 - AO356_22555 0.32 +0.4
Or see this region's nucleotide sequence