Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22255 and AO356_22260 are separated by 40 nucleotides AO356_22260 and AO356_22265 are separated by 60 nucleotides AO356_22265 and AO356_22270 are separated by 213 nucleotides
AO356_22255: AO356_22255 - gamma-glutamyltranspeptidase, at 4,976,702 to 4,978,429
_22255
AO356_22260: AO356_22260 - isochorismatase, at 4,978,470 to 4,979,003
_22260
AO356_22265: AO356_22265 - hypothetical protein, at 4,979,064 to 4,979,924
_22265
AO356_22270: AO356_22270 - hypothetical protein, at 4,980,138 to 4,981,103
_22270
Position (kb)
4979
4980 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4978.157 kb on + strand, within AO356_22255 at 4978.379 kb on + strand at 4978.379 kb on + strand at 4978.490 kb on + strand at 4978.731 kb on + strand, within AO356_22260 at 4978.731 kb on + strand, within AO356_22260 at 4978.806 kb on + strand, within AO356_22260 at 4978.806 kb on + strand, within AO356_22260 at 4978.975 kb on + strand at 4978.976 kb on - strand at 4979.038 kb on + strand at 4979.038 kb on + strand at 4979.038 kb on + strand at 4979.039 kb on - strand at 4979.039 kb on - strand at 4979.039 kb on - strand at 4979.039 kb on - strand at 4979.092 kb on + strand at 4979.092 kb on + strand at 4979.320 kb on + strand, within AO356_22265 at 4979.320 kb on + strand, within AO356_22265 at 4979.320 kb on + strand, within AO356_22265 at 4979.321 kb on - strand, within AO356_22265 at 4979.321 kb on - strand, within AO356_22265 at 4979.321 kb on - strand, within AO356_22265 at 4979.321 kb on - strand, within AO356_22265 at 4979.566 kb on + strand, within AO356_22265 at 4980.121 kb on + strand at 4980.122 kb on - strand at 4980.187 kb on + strand at 4980.188 kb on - strand at 4980.373 kb on + strand, within AO356_22270 at 4980.374 kb on - strand, within AO356_22270 at 4980.374 kb on - strand, within AO356_22270 at 4980.374 kb on - strand, within AO356_22270 at 4980.481 kb on - strand, within AO356_22270 at 4980.654 kb on + strand, within AO356_22270 at 4980.811 kb on + strand, within AO356_22270 at 4980.921 kb on + strand, within AO356_22270
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 4,978,157 + AO356_22255 0.84 -1.7 4,978,379 + +0.4 4,978,379 + +0.5 4,978,490 + -1.4 4,978,731 + AO356_22260 0.49 -1.4 4,978,731 + AO356_22260 0.49 +1.2 4,978,806 + AO356_22260 0.63 +0.1 4,978,806 + AO356_22260 0.63 +1.1 4,978,975 + +0.1 4,978,976 - +0.4 4,979,038 + -0.1 4,979,038 + -0.0 4,979,038 + +0.7 4,979,039 - +1.3 4,979,039 - +0.4 4,979,039 - -1.0 4,979,039 - +0.4 4,979,092 + -0.2 4,979,092 + +0.1 4,979,320 + AO356_22265 0.30 -1.4 4,979,320 + AO356_22265 0.30 -3.7 4,979,320 + AO356_22265 0.30 +0.7 4,979,321 - AO356_22265 0.30 -0.6 4,979,321 - AO356_22265 0.30 -0.9 4,979,321 - AO356_22265 0.30 -0.2 4,979,321 - AO356_22265 0.30 +0.2 4,979,566 + AO356_22265 0.58 -0.2 4,980,121 + +0.7 4,980,122 - -0.2 4,980,187 + -1.0 4,980,188 - -1.7 4,980,373 + AO356_22270 0.24 +0.4 4,980,374 - AO356_22270 0.24 +1.4 4,980,374 - AO356_22270 0.24 -0.0 4,980,374 - AO356_22270 0.24 -0.7 4,980,481 - AO356_22270 0.36 -2.3 4,980,654 + AO356_22270 0.53 -1.3 4,980,811 + AO356_22270 0.70 -0.5 4,980,921 + AO356_22270 0.81 -0.3
Or see this region's nucleotide sequence