Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_18490 and AO356_18495 are separated by 87 nucleotides AO356_18495 and AO356_18500 are separated by 13 nucleotides AO356_18500 and AO356_18505 are separated by 0 nucleotides AO356_18505 and AO356_18510 are separated by 11 nucleotides
AO356_18490: AO356_18490 - septation protein A, at 4,161,081 to 4,161,677
_18490
AO356_18495: AO356_18495 - phosphoesterase, at 4,161,765 to 4,162,628
_18495
AO356_18500: AO356_18500 - hypothetical protein, at 4,162,642 to 4,163,271
_18500
AO356_18505: AO356_18505 - chromosome segregation protein ScpA, at 4,163,272 to 4,164,102
_18505
AO356_18510: AO356_18510 - segregation and condensation protein B, at 4,164,114 to 4,165,064
_18510
Position (kb)
4162
4163
4164 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4161.708 kb on + strand at 4161.709 kb on - strand at 4161.711 kb on + strand at 4161.711 kb on + strand at 4161.711 kb on + strand at 4161.711 kb on + strand at 4161.711 kb on + strand at 4161.711 kb on + strand at 4161.711 kb on + strand at 4161.711 kb on + strand at 4161.711 kb on + strand at 4161.712 kb on - strand at 4161.712 kb on - strand at 4161.712 kb on - strand at 4161.712 kb on - strand at 4161.712 kb on - strand at 4161.712 kb on - strand at 4161.712 kb on - strand at 4161.712 kb on - strand at 4161.712 kb on - strand at 4161.753 kb on + strand at 4161.754 kb on - strand at 4161.754 kb on - strand at 4161.788 kb on + strand at 4161.788 kb on + strand at 4161.789 kb on - strand at 4161.962 kb on + strand, within AO356_18495 at 4161.962 kb on + strand, within AO356_18495 at 4161.962 kb on + strand, within AO356_18495 at 4161.962 kb on + strand, within AO356_18495 at 4161.963 kb on - strand, within AO356_18495 at 4161.996 kb on + strand, within AO356_18495 at 4161.996 kb on + strand, within AO356_18495 at 4161.996 kb on + strand, within AO356_18495 at 4161.997 kb on - strand, within AO356_18495 at 4162.356 kb on + strand, within AO356_18495 at 4162.357 kb on - strand, within AO356_18495 at 4162.357 kb on - strand, within AO356_18495 at 4162.398 kb on + strand, within AO356_18495 at 4162.398 kb on + strand, within AO356_18495 at 4162.399 kb on - strand, within AO356_18495 at 4162.399 kb on - strand, within AO356_18495 at 4162.400 kb on + strand, within AO356_18495 at 4162.400 kb on + strand, within AO356_18495 at 4162.400 kb on + strand, within AO356_18495 at 4162.400 kb on + strand, within AO356_18495 at 4162.401 kb on - strand, within AO356_18495 at 4162.401 kb on - strand, within AO356_18495 at 4162.401 kb on - strand, within AO356_18495 at 4162.401 kb on - strand, within AO356_18495 at 4162.401 kb on - strand, within AO356_18495 at 4162.401 kb on - strand, within AO356_18495 at 4162.634 kb on + strand at 4162.634 kb on + strand at 4162.634 kb on + strand at 4162.635 kb on - strand at 4162.635 kb on - strand at 4162.635 kb on - strand at 4162.635 kb on - strand at 4162.735 kb on + strand, within AO356_18500 at 4162.735 kb on + strand, within AO356_18500 at 4162.753 kb on + strand, within AO356_18500 at 4162.753 kb on + strand, within AO356_18500 at 4162.753 kb on + strand, within AO356_18500 at 4162.754 kb on - strand, within AO356_18500 at 4162.754 kb on - strand, within AO356_18500 at 4162.930 kb on + strand, within AO356_18500 at 4162.930 kb on + strand, within AO356_18500 at 4162.930 kb on + strand, within AO356_18500 at 4162.931 kb on - strand, within AO356_18500 at 4163.114 kb on - strand, within AO356_18500 at 4163.129 kb on + strand, within AO356_18500 at 4163.129 kb on + strand, within AO356_18500 at 4163.130 kb on - strand, within AO356_18500 at 4163.350 kb on + strand at 4163.351 kb on - strand at 4163.351 kb on - strand at 4163.386 kb on + strand, within AO356_18505 at 4163.386 kb on + strand, within AO356_18505 at 4163.386 kb on + strand, within AO356_18505 at 4163.387 kb on - strand, within AO356_18505 at 4163.387 kb on - strand, within AO356_18505 at 4163.387 kb on - strand, within AO356_18505 at 4163.453 kb on - strand, within AO356_18505 at 4163.479 kb on - strand, within AO356_18505 at 4163.515 kb on + strand, within AO356_18505 at 4163.515 kb on + strand, within AO356_18505 at 4163.515 kb on + strand, within AO356_18505 at 4163.516 kb on - strand, within AO356_18505 at 4163.524 kb on + strand, within AO356_18505 at 4163.547 kb on - strand, within AO356_18505 at 4163.570 kb on - strand, within AO356_18505 at 4163.570 kb on - strand, within AO356_18505 at 4163.570 kb on - strand, within AO356_18505 at 4163.689 kb on + strand, within AO356_18505 at 4163.689 kb on + strand, within AO356_18505 at 4163.690 kb on - strand, within AO356_18505 at 4163.807 kb on + strand, within AO356_18505 at 4163.807 kb on + strand, within AO356_18505 at 4163.807 kb on + strand, within AO356_18505 at 4163.807 kb on + strand, within AO356_18505 at 4163.807 kb on + strand, within AO356_18505 at 4163.807 kb on + strand, within AO356_18505 at 4163.807 kb on + strand, within AO356_18505 at 4163.808 kb on - strand, within AO356_18505 at 4163.859 kb on + strand, within AO356_18505 at 4163.860 kb on - strand, within AO356_18505
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 4,161,708 + -0.2 4,161,709 - +0.0 4,161,711 + -1.8 4,161,711 + -0.6 4,161,711 + +2.1 4,161,711 + -0.7 4,161,711 + -0.5 4,161,711 + -0.2 4,161,711 + -2.2 4,161,711 + -0.6 4,161,711 + -1.6 4,161,712 - -0.2 4,161,712 - -0.9 4,161,712 - -0.7 4,161,712 - +0.2 4,161,712 - -0.6 4,161,712 - +0.5 4,161,712 - -3.6 4,161,712 - +0.8 4,161,712 - +0.2 4,161,753 + -0.4 4,161,754 - -0.0 4,161,754 - -0.6 4,161,788 + -2.2 4,161,788 + +1.4 4,161,789 - -0.9 4,161,962 + AO356_18495 0.23 -0.3 4,161,962 + AO356_18495 0.23 -0.0 4,161,962 + AO356_18495 0.23 -0.5 4,161,962 + AO356_18495 0.23 -1.4 4,161,963 - AO356_18495 0.23 -0.7 4,161,996 + AO356_18495 0.27 -0.5 4,161,996 + AO356_18495 0.27 -0.6 4,161,996 + AO356_18495 0.27 -1.0 4,161,997 - AO356_18495 0.27 +0.2 4,162,356 + AO356_18495 0.68 +0.6 4,162,357 - AO356_18495 0.69 +0.4 4,162,357 - AO356_18495 0.69 -0.2 4,162,398 + AO356_18495 0.73 -1.1 4,162,398 + AO356_18495 0.73 -0.1 4,162,399 - AO356_18495 0.73 -0.8 4,162,399 - AO356_18495 0.73 -0.3 4,162,400 + AO356_18495 0.73 +0.8 4,162,400 + AO356_18495 0.73 +0.3 4,162,400 + AO356_18495 0.73 -0.2 4,162,400 + AO356_18495 0.73 +0.5 4,162,401 - AO356_18495 0.74 -1.6 4,162,401 - AO356_18495 0.74 -0.4 4,162,401 - AO356_18495 0.74 -0.2 4,162,401 - AO356_18495 0.74 +0.8 4,162,401 - AO356_18495 0.74 -0.1 4,162,401 - AO356_18495 0.74 -0.1 4,162,634 + -1.1 4,162,634 + -1.3 4,162,634 + +0.1 4,162,635 - +0.7 4,162,635 - -0.4 4,162,635 - +0.1 4,162,635 - -0.2 4,162,735 + AO356_18500 0.15 -0.2 4,162,735 + AO356_18500 0.15 -0.3 4,162,753 + AO356_18500 0.18 -0.7 4,162,753 + AO356_18500 0.18 -0.6 4,162,753 + AO356_18500 0.18 -0.5 4,162,754 - AO356_18500 0.18 +0.2 4,162,754 - AO356_18500 0.18 +0.3 4,162,930 + AO356_18500 0.46 -0.4 4,162,930 + AO356_18500 0.46 +0.6 4,162,930 + AO356_18500 0.46 -0.1 4,162,931 - AO356_18500 0.46 +0.2 4,163,114 - AO356_18500 0.75 -0.2 4,163,129 + AO356_18500 0.77 -0.5 4,163,129 + AO356_18500 0.77 +0.3 4,163,130 - AO356_18500 0.77 -0.9 4,163,350 + -0.5 4,163,351 - +0.1 4,163,351 - +0.7 4,163,386 + AO356_18505 0.14 -1.1 4,163,386 + AO356_18505 0.14 +1.5 4,163,386 + AO356_18505 0.14 -0.4 4,163,387 - AO356_18505 0.14 -1.0 4,163,387 - AO356_18505 0.14 -1.3 4,163,387 - AO356_18505 0.14 -0.1 4,163,453 - AO356_18505 0.22 -2.7 4,163,479 - AO356_18505 0.25 -0.2 4,163,515 + AO356_18505 0.29 +0.4 4,163,515 + AO356_18505 0.29 -0.5 4,163,515 + AO356_18505 0.29 -0.7 4,163,516 - AO356_18505 0.29 +0.8 4,163,524 + AO356_18505 0.30 -2.0 4,163,547 - AO356_18505 0.33 -0.2 4,163,570 - AO356_18505 0.36 -1.3 4,163,570 - AO356_18505 0.36 -0.6 4,163,570 - AO356_18505 0.36 +0.3 4,163,689 + AO356_18505 0.50 -1.3 4,163,689 + AO356_18505 0.50 -2.1 4,163,690 - AO356_18505 0.50 +0.2 4,163,807 + AO356_18505 0.64 -0.4 4,163,807 + AO356_18505 0.64 -0.5 4,163,807 + AO356_18505 0.64 +0.4 4,163,807 + AO356_18505 0.64 -2.0 4,163,807 + AO356_18505 0.64 +0.8 4,163,807 + AO356_18505 0.64 -0.4 4,163,807 + AO356_18505 0.64 -0.6 4,163,808 - AO356_18505 0.65 -0.9 4,163,859 + AO356_18505 0.71 -0.1 4,163,860 - AO356_18505 0.71 +0.4
Or see this region's nucleotide sequence