Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16760 and AO356_16765 are separated by 54 nucleotides AO356_16765 and AO356_16770 are separated by 155 nucleotides AO356_16770 and AO356_16775 are separated by 140 nucleotides AO356_16775 and AO356_16780 overlap by 1 nucleotides
AO356_16760: AO356_16760 - hypothetical protein, at 3,777,202 to 3,777,807
_16760
AO356_16765: AO356_16765 - histidine kinase, at 3,777,862 to 3,778,335
_16765
AO356_16770: AO356_16770 - flavodoxin, at 3,778,491 to 3,778,946
_16770
AO356_16775: AO356_16775 - aldolase, at 3,779,087 to 3,779,869
_16775
AO356_16780: AO356_16780 - alpha/beta hydrolase, at 3,779,869 to 3,780,771
_16780
Position (kb)
3778
3779 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3777.523 kb on + strand, within AO356_16760 at 3777.542 kb on + strand, within AO356_16760 at 3777.542 kb on + strand, within AO356_16760 at 3777.542 kb on + strand, within AO356_16760 at 3777.543 kb on - strand, within AO356_16760 at 3777.824 kb on + strand at 3777.830 kb on - strand at 3777.850 kb on - strand at 3777.863 kb on + strand at 3777.864 kb on - strand at 3778.004 kb on + strand, within AO356_16765 at 3778.004 kb on + strand, within AO356_16765 at 3778.004 kb on + strand, within AO356_16765 at 3778.004 kb on + strand, within AO356_16765 at 3778.004 kb on + strand, within AO356_16765 at 3778.004 kb on + strand, within AO356_16765 at 3778.004 kb on + strand, within AO356_16765 at 3778.004 kb on + strand, within AO356_16765 at 3778.005 kb on - strand, within AO356_16765 at 3778.005 kb on - strand, within AO356_16765 at 3778.005 kb on - strand, within AO356_16765 at 3778.005 kb on - strand, within AO356_16765 at 3778.005 kb on - strand, within AO356_16765 at 3778.005 kb on - strand, within AO356_16765 at 3778.011 kb on - strand, within AO356_16765 at 3778.080 kb on - strand, within AO356_16765 at 3778.241 kb on + strand, within AO356_16765 at 3778.241 kb on + strand, within AO356_16765 at 3778.241 kb on + strand, within AO356_16765 at 3778.241 kb on + strand, within AO356_16765 at 3778.241 kb on + strand, within AO356_16765 at 3778.241 kb on + strand, within AO356_16765 at 3778.241 kb on + strand, within AO356_16765 at 3778.241 kb on + strand, within AO356_16765 at 3778.241 kb on + strand, within AO356_16765 at 3778.241 kb on + strand, within AO356_16765 at 3778.241 kb on + strand, within AO356_16765 at 3778.242 kb on - strand, within AO356_16765 at 3778.242 kb on - strand, within AO356_16765 at 3778.242 kb on - strand, within AO356_16765 at 3778.242 kb on - strand, within AO356_16765 at 3778.242 kb on - strand, within AO356_16765 at 3778.242 kb on - strand, within AO356_16765 at 3778.242 kb on - strand, within AO356_16765 at 3778.251 kb on + strand, within AO356_16765 at 3778.251 kb on + strand, within AO356_16765 at 3778.252 kb on - strand, within AO356_16765 at 3778.252 kb on - strand, within AO356_16765 at 3778.377 kb on + strand at 3778.377 kb on + strand at 3778.377 kb on + strand at 3778.452 kb on + strand at 3778.453 kb on - strand at 3778.453 kb on - strand at 3778.453 kb on - strand at 3778.453 kb on - strand at 3778.455 kb on + strand at 3778.455 kb on + strand at 3778.521 kb on + strand at 3778.521 kb on + strand at 3778.521 kb on + strand at 3778.521 kb on + strand at 3778.521 kb on + strand at 3778.521 kb on + strand at 3778.521 kb on + strand at 3778.521 kb on + strand at 3778.521 kb on + strand at 3778.522 kb on - strand at 3778.522 kb on - strand at 3778.659 kb on - strand, within AO356_16770 at 3778.659 kb on - strand, within AO356_16770 at 3778.701 kb on + strand, within AO356_16770 at 3778.701 kb on + strand, within AO356_16770 at 3778.701 kb on + strand, within AO356_16770 at 3778.701 kb on + strand, within AO356_16770 at 3778.701 kb on + strand, within AO356_16770 at 3778.701 kb on + strand, within AO356_16770 at 3778.780 kb on - strand, within AO356_16770 at 3778.787 kb on + strand, within AO356_16770 at 3778.788 kb on - strand, within AO356_16770 at 3778.788 kb on - strand, within AO356_16770 at 3778.974 kb on + strand at 3778.974 kb on + strand at 3778.974 kb on + strand at 3778.974 kb on + strand at 3778.975 kb on - strand at 3778.995 kb on + strand at 3778.995 kb on + strand at 3778.995 kb on + strand at 3779.017 kb on + strand at 3779.017 kb on + strand at 3779.018 kb on - strand at 3779.018 kb on - strand at 3779.035 kb on + strand at 3779.060 kb on + strand at 3779.060 kb on + strand at 3779.060 kb on + strand at 3779.061 kb on - strand at 3779.061 kb on - strand at 3779.061 kb on - strand at 3779.062 kb on + strand at 3779.062 kb on + strand at 3779.062 kb on + strand at 3779.063 kb on - strand at 3779.095 kb on - strand at 3779.119 kb on + strand at 3779.193 kb on + strand, within AO356_16775 at 3779.193 kb on + strand, within AO356_16775 at 3779.193 kb on + strand, within AO356_16775 at 3779.193 kb on + strand, within AO356_16775 at 3779.193 kb on + strand, within AO356_16775 at 3779.193 kb on + strand, within AO356_16775 at 3779.194 kb on - strand, within AO356_16775 at 3779.194 kb on - strand, within AO356_16775 at 3779.194 kb on - strand, within AO356_16775 at 3779.194 kb on - strand, within AO356_16775 at 3779.224 kb on + strand, within AO356_16775 at 3779.224 kb on + strand, within AO356_16775 at 3779.225 kb on - strand, within AO356_16775 at 3779.225 kb on - strand, within AO356_16775 at 3779.225 kb on - strand, within AO356_16775 at 3779.225 kb on - strand, within AO356_16775 at 3779.225 kb on - strand, within AO356_16775 at 3779.225 kb on - strand, within AO356_16775 at 3779.225 kb on - strand, within AO356_16775 at 3779.372 kb on + strand, within AO356_16775 at 3779.372 kb on + strand, within AO356_16775 at 3779.373 kb on - strand, within AO356_16775 at 3779.522 kb on + strand, within AO356_16775 at 3779.523 kb on - strand, within AO356_16775 at 3779.532 kb on - strand, within AO356_16775 at 3779.859 kb on - strand at 3779.860 kb on + strand at 3779.860 kb on + strand at 3779.860 kb on + strand at 3779.860 kb on + strand at 3779.860 kb on + strand at 3779.861 kb on - strand at 3779.861 kb on - strand at 3779.895 kb on + strand at 3779.895 kb on + strand at 3779.896 kb on - strand at 3779.896 kb on - strand at 3779.896 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 3,777,523 + AO356_16760 0.53 -3.0 3,777,542 + AO356_16760 0.56 -0.6 3,777,542 + AO356_16760 0.56 -0.8 3,777,542 + AO356_16760 0.56 -0.1 3,777,543 - AO356_16760 0.56 -1.9 3,777,824 + -1.1 3,777,830 - +1.1 3,777,850 - +0.5 3,777,863 + -1.1 3,777,864 - -0.7 3,778,004 + AO356_16765 0.30 -2.1 3,778,004 + AO356_16765 0.30 -0.6 3,778,004 + AO356_16765 0.30 -0.4 3,778,004 + AO356_16765 0.30 +0.2 3,778,004 + AO356_16765 0.30 -1.4 3,778,004 + AO356_16765 0.30 -2.2 3,778,004 + AO356_16765 0.30 -0.0 3,778,004 + AO356_16765 0.30 -0.5 3,778,005 - AO356_16765 0.30 -0.5 3,778,005 - AO356_16765 0.30 +1.2 3,778,005 - AO356_16765 0.30 +0.7 3,778,005 - AO356_16765 0.30 +0.7 3,778,005 - AO356_16765 0.30 +1.2 3,778,005 - AO356_16765 0.30 +0.6 3,778,011 - AO356_16765 0.31 +0.2 3,778,080 - AO356_16765 0.46 +0.4 3,778,241 + AO356_16765 0.80 +0.7 3,778,241 + AO356_16765 0.80 -0.2 3,778,241 + AO356_16765 0.80 -1.9 3,778,241 + AO356_16765 0.80 -0.1 3,778,241 + AO356_16765 0.80 +0.1 3,778,241 + AO356_16765 0.80 -0.5 3,778,241 + AO356_16765 0.80 -1.3 3,778,241 + AO356_16765 0.80 -1.5 3,778,241 + AO356_16765 0.80 -1.7 3,778,241 + AO356_16765 0.80 +0.9 3,778,241 + AO356_16765 0.80 -0.1 3,778,242 - AO356_16765 0.80 +0.9 3,778,242 - AO356_16765 0.80 +1.6 3,778,242 - AO356_16765 0.80 -0.5 3,778,242 - AO356_16765 0.80 -0.0 3,778,242 - AO356_16765 0.80 -0.4 3,778,242 - AO356_16765 0.80 +0.5 3,778,242 - AO356_16765 0.80 -1.3 3,778,251 + AO356_16765 0.82 -0.6 3,778,251 + AO356_16765 0.82 -1.4 3,778,252 - AO356_16765 0.82 -0.4 3,778,252 - AO356_16765 0.82 -0.4 3,778,377 + -0.7 3,778,377 + -1.0 3,778,377 + +0.5 3,778,452 + -0.2 3,778,453 - +0.5 3,778,453 - -0.4 3,778,453 - +0.5 3,778,453 - +0.3 3,778,455 + +0.3 3,778,455 + -3.3 3,778,521 + -0.5 3,778,521 + -1.2 3,778,521 + -0.2 3,778,521 + -0.2 3,778,521 + -0.5 3,778,521 + -0.4 3,778,521 + +1.2 3,778,521 + -2.1 3,778,521 + +1.0 3,778,522 - -0.5 3,778,522 - +0.7 3,778,659 - AO356_16770 0.37 -0.9 3,778,659 - AO356_16770 0.37 +1.0 3,778,701 + AO356_16770 0.46 -1.0 3,778,701 + AO356_16770 0.46 -1.2 3,778,701 + AO356_16770 0.46 +1.2 3,778,701 + AO356_16770 0.46 +0.9 3,778,701 + AO356_16770 0.46 -0.1 3,778,701 + AO356_16770 0.46 +0.2 3,778,780 - AO356_16770 0.63 -1.0 3,778,787 + AO356_16770 0.65 -1.1 3,778,788 - AO356_16770 0.65 +0.3 3,778,788 - AO356_16770 0.65 -0.5 3,778,974 + +0.7 3,778,974 + +0.5 3,778,974 + +0.4 3,778,974 + +0.9 3,778,975 - +1.4 3,778,995 + -0.7 3,778,995 + +0.3 3,778,995 + +0.3 3,779,017 + -0.1 3,779,017 + +0.2 3,779,018 - -0.2 3,779,018 - +0.4 3,779,035 + -0.1 3,779,060 + +0.1 3,779,060 + -0.3 3,779,060 + +0.5 3,779,061 - -0.5 3,779,061 - +0.5 3,779,061 - +0.3 3,779,062 + -0.0 3,779,062 + +0.9 3,779,062 + -0.5 3,779,063 - -0.3 3,779,095 - +0.1 3,779,119 + +0.9 3,779,193 + AO356_16775 0.14 +0.3 3,779,193 + AO356_16775 0.14 +0.1 3,779,193 + AO356_16775 0.14 +0.3 3,779,193 + AO356_16775 0.14 -1.2 3,779,193 + AO356_16775 0.14 +0.2 3,779,193 + AO356_16775 0.14 -0.2 3,779,194 - AO356_16775 0.14 +0.1 3,779,194 - AO356_16775 0.14 +0.7 3,779,194 - AO356_16775 0.14 +1.1 3,779,194 - AO356_16775 0.14 +0.4 3,779,224 + AO356_16775 0.17 -0.2 3,779,224 + AO356_16775 0.17 +1.0 3,779,225 - AO356_16775 0.18 -0.6 3,779,225 - AO356_16775 0.18 -0.5 3,779,225 - AO356_16775 0.18 +0.6 3,779,225 - AO356_16775 0.18 +0.6 3,779,225 - AO356_16775 0.18 +1.8 3,779,225 - AO356_16775 0.18 -0.3 3,779,225 - AO356_16775 0.18 +0.7 3,779,372 + AO356_16775 0.36 -0.0 3,779,372 + AO356_16775 0.36 +0.2 3,779,373 - AO356_16775 0.37 -0.1 3,779,522 + AO356_16775 0.56 -0.7 3,779,523 - AO356_16775 0.56 -0.5 3,779,532 - AO356_16775 0.57 +1.0 3,779,859 - +0.6 3,779,860 + +0.2 3,779,860 + -0.5 3,779,860 + +0.2 3,779,860 + -0.3 3,779,860 + +0.2 3,779,861 - +1.7 3,779,861 - -0.3 3,779,895 + +0.4 3,779,895 + +0.7 3,779,896 - -0.6 3,779,896 - -0.6 3,779,896 - +0.5
Or see this region's nucleotide sequence