Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16615 and AO356_16620 are separated by 367 nucleotides AO356_16620 and AO356_16625 are separated by 222 nucleotides AO356_16625 and AO356_16630 are separated by 139 nucleotides AO356_16630 and AO356_16635 are separated by 10 nucleotides AO356_16635 and AO356_16640 are separated by 39 nucleotides
AO356_16615: AO356_16615 - hypothetical protein, at 3,749,846 to 3,750,052
_16615
AO356_16620: AO356_16620 - hypothetical protein, at 3,750,420 to 3,750,701
_16620
AO356_16625: AO356_16625 - glycerol acyltransferase, at 3,750,924 to 3,752,090
_16625
AO356_16630: AO356_16630 - hypothetical protein, at 3,752,230 to 3,752,412
_16630
AO356_16635: AO356_16635 - hypothetical protein, at 3,752,423 to 3,752,683
_16635
AO356_16640: AO356_16640 - hypothetical protein, at 3,752,723 to 3,753,346
_16640
Position (kb)
3750
3751
3752
3753 Strain fitness (log2 ratio)
-2
-1
0
1 at 3749.940 kb on + strand, within AO356_16615 at 3749.940 kb on + strand, within AO356_16615 at 3749.941 kb on - strand, within AO356_16615 at 3749.941 kb on - strand, within AO356_16615 at 3750.021 kb on + strand, within AO356_16615 at 3750.021 kb on + strand, within AO356_16615 at 3750.021 kb on + strand, within AO356_16615 at 3750.022 kb on - strand, within AO356_16615 at 3750.022 kb on - strand, within AO356_16615 at 3750.092 kb on + strand at 3750.092 kb on + strand at 3750.092 kb on + strand at 3750.093 kb on - strand at 3750.093 kb on - strand at 3750.196 kb on + strand at 3750.264 kb on + strand at 3750.264 kb on + strand at 3750.264 kb on + strand at 3750.264 kb on + strand at 3750.264 kb on + strand at 3750.265 kb on - strand at 3750.265 kb on - strand at 3750.265 kb on - strand at 3750.371 kb on + strand at 3750.372 kb on - strand at 3750.372 kb on - strand at 3750.511 kb on + strand, within AO356_16620 at 3750.690 kb on - strand at 3750.707 kb on + strand at 3750.707 kb on + strand at 3750.707 kb on + strand at 3750.707 kb on + strand at 3750.707 kb on + strand at 3750.707 kb on + strand at 3750.707 kb on + strand at 3750.707 kb on + strand at 3750.708 kb on - strand at 3750.925 kb on + strand at 3750.926 kb on - strand at 3752.117 kb on - strand at 3752.117 kb on - strand at 3752.117 kb on - strand at 3752.117 kb on - strand at 3752.121 kb on - strand at 3752.121 kb on - strand at 3752.121 kb on - strand at 3752.121 kb on - strand at 3752.121 kb on - strand at 3752.121 kb on - strand at 3752.163 kb on - strand at 3752.163 kb on - strand at 3752.163 kb on - strand at 3752.163 kb on - strand at 3752.163 kb on - strand at 3752.190 kb on - strand at 3752.190 kb on - strand at 3752.190 kb on - strand at 3752.190 kb on - strand at 3752.190 kb on - strand at 3752.202 kb on - strand at 3752.202 kb on - strand at 3752.202 kb on - strand at 3752.204 kb on - strand at 3752.204 kb on - strand at 3752.204 kb on - strand at 3752.248 kb on + strand at 3752.249 kb on - strand, within AO356_16630 at 3752.249 kb on - strand, within AO356_16630 at 3752.249 kb on - strand, within AO356_16630 at 3752.249 kb on - strand, within AO356_16630 at 3752.249 kb on - strand, within AO356_16630 at 3752.249 kb on - strand, within AO356_16630 at 3752.260 kb on + strand, within AO356_16630 at 3752.314 kb on + strand, within AO356_16630 at 3752.314 kb on + strand, within AO356_16630 at 3752.314 kb on + strand, within AO356_16630 at 3752.314 kb on + strand, within AO356_16630 at 3752.314 kb on + strand, within AO356_16630 at 3752.314 kb on + strand, within AO356_16630 at 3752.314 kb on + strand, within AO356_16630 at 3752.315 kb on - strand, within AO356_16630 at 3752.315 kb on - strand, within AO356_16630 at 3752.315 kb on - strand, within AO356_16630 at 3752.315 kb on - strand, within AO356_16630 at 3752.436 kb on - strand at 3752.436 kb on - strand at 3752.594 kb on + strand, within AO356_16635 at 3752.595 kb on - strand, within AO356_16635 at 3752.595 kb on - strand, within AO356_16635 at 3752.618 kb on + strand, within AO356_16635 at 3752.619 kb on - strand, within AO356_16635 at 3752.619 kb on - strand, within AO356_16635 at 3752.619 kb on - strand, within AO356_16635 at 3752.619 kb on - strand, within AO356_16635 at 3752.660 kb on + strand at 3752.681 kb on + strand at 3752.681 kb on + strand at 3752.735 kb on + strand at 3752.736 kb on - strand at 3752.809 kb on + strand, within AO356_16640
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 3,749,940 + AO356_16615 0.45 +0.7 3,749,940 + AO356_16615 0.45 +0.1 3,749,941 - AO356_16615 0.46 -0.1 3,749,941 - AO356_16615 0.46 -1.5 3,750,021 + AO356_16615 0.85 +0.8 3,750,021 + AO356_16615 0.85 -0.3 3,750,021 + AO356_16615 0.85 +0.9 3,750,022 - AO356_16615 0.85 -1.5 3,750,022 - AO356_16615 0.85 +1.3 3,750,092 + -0.4 3,750,092 + -0.2 3,750,092 + +0.6 3,750,093 - -0.7 3,750,093 - -0.1 3,750,196 + -0.5 3,750,264 + -0.1 3,750,264 + +0.0 3,750,264 + +0.4 3,750,264 + +0.2 3,750,264 + +0.5 3,750,265 - -0.4 3,750,265 - -0.1 3,750,265 - +0.2 3,750,371 + +0.6 3,750,372 - +0.4 3,750,372 - +0.6 3,750,511 + AO356_16620 0.32 +0.5 3,750,690 - -0.5 3,750,707 + +0.2 3,750,707 + +0.1 3,750,707 + +0.3 3,750,707 + +0.1 3,750,707 + +0.4 3,750,707 + +0.8 3,750,707 + -0.9 3,750,707 + +0.6 3,750,708 - +0.8 3,750,925 + -1.3 3,750,926 - +0.4 3,752,117 - -0.3 3,752,117 - -0.0 3,752,117 - -2.0 3,752,117 - -0.3 3,752,121 - -1.1 3,752,121 - +1.2 3,752,121 - +0.2 3,752,121 - +0.5 3,752,121 - -2.4 3,752,121 - +0.1 3,752,163 - -1.5 3,752,163 - +0.1 3,752,163 - +1.1 3,752,163 - +0.1 3,752,163 - +0.9 3,752,190 - +1.1 3,752,190 - +0.5 3,752,190 - +0.8 3,752,190 - -0.2 3,752,190 - -0.1 3,752,202 - -0.1 3,752,202 - +0.5 3,752,202 - +1.5 3,752,204 - +0.0 3,752,204 - +1.5 3,752,204 - +0.7 3,752,248 + -0.6 3,752,249 - AO356_16630 0.10 +0.5 3,752,249 - AO356_16630 0.10 +0.3 3,752,249 - AO356_16630 0.10 -0.3 3,752,249 - AO356_16630 0.10 +0.2 3,752,249 - AO356_16630 0.10 -0.1 3,752,249 - AO356_16630 0.10 +0.9 3,752,260 + AO356_16630 0.16 -1.8 3,752,314 + AO356_16630 0.46 -1.4 3,752,314 + AO356_16630 0.46 -0.9 3,752,314 + AO356_16630 0.46 -1.5 3,752,314 + AO356_16630 0.46 +0.6 3,752,314 + AO356_16630 0.46 -1.7 3,752,314 + AO356_16630 0.46 -1.4 3,752,314 + AO356_16630 0.46 -1.9 3,752,315 - AO356_16630 0.46 +1.3 3,752,315 - AO356_16630 0.46 +1.1 3,752,315 - AO356_16630 0.46 -0.3 3,752,315 - AO356_16630 0.46 -1.1 3,752,436 - +1.0 3,752,436 - +0.4 3,752,594 + AO356_16635 0.66 -1.9 3,752,595 - AO356_16635 0.66 +1.5 3,752,595 - AO356_16635 0.66 -0.0 3,752,618 + AO356_16635 0.75 +0.0 3,752,619 - AO356_16635 0.75 -0.1 3,752,619 - AO356_16635 0.75 +0.5 3,752,619 - AO356_16635 0.75 -1.0 3,752,619 - AO356_16635 0.75 -0.6 3,752,660 + -0.8 3,752,681 + +0.1 3,752,681 + +0.2 3,752,735 + +1.5 3,752,736 - +1.6 3,752,809 + AO356_16640 0.14 +0.7
Or see this region's nucleotide sequence