Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16475 and AO356_16480 are separated by 1 nucleotides AO356_16480 and AO356_16485 are separated by 4 nucleotides AO356_16485 and AO356_16490 are separated by 172 nucleotides
AO356_16475: AO356_16475 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, at 3,722,761 to 3,723,612
_16475
AO356_16480: AO356_16480 - outer membrane lipoprotein LolB, at 3,723,614 to 3,724,231
_16480
AO356_16485: AO356_16485 - hypothetical protein, at 3,724,236 to 3,725,960
_16485
AO356_16490: AO356_16490 - glutamyl-tRNA reductase, at 3,726,133 to 3,727,422
_16490
Position (kb)
3724
3725
3726 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3724.232 kb on - strand at 3724.283 kb on + strand at 3724.284 kb on - strand at 3724.284 kb on - strand at 3724.284 kb on - strand at 3724.682 kb on - strand, within AO356_16485 at 3724.682 kb on - strand, within AO356_16485 at 3724.729 kb on - strand, within AO356_16485 at 3724.729 kb on - strand, within AO356_16485 at 3724.787 kb on - strand, within AO356_16485 at 3724.802 kb on - strand, within AO356_16485 at 3724.802 kb on - strand, within AO356_16485 at 3724.825 kb on - strand, within AO356_16485 at 3724.825 kb on - strand, within AO356_16485 at 3724.904 kb on - strand, within AO356_16485 at 3724.931 kb on - strand, within AO356_16485 at 3725.036 kb on - strand, within AO356_16485 at 3725.114 kb on - strand, within AO356_16485 at 3725.186 kb on - strand, within AO356_16485 at 3725.186 kb on - strand, within AO356_16485 at 3725.541 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.675 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.961 kb on - strand at 3725.961 kb on - strand at 3725.961 kb on - strand at 3725.961 kb on - strand at 3725.961 kb on - strand at 3725.961 kb on - strand at 3725.963 kb on - strand at 3725.963 kb on - strand at 3725.963 kb on - strand at 3725.963 kb on - strand at 3726.021 kb on + strand at 3726.021 kb on + strand at 3726.038 kb on + strand at 3726.039 kb on - strand at 3726.058 kb on + strand at 3726.059 kb on - strand at 3726.092 kb on + strand at 3726.092 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 3,724,232 - +0.5 3,724,283 + +1.0 3,724,284 - -1.5 3,724,284 - -0.1 3,724,284 - +0.9 3,724,682 - AO356_16485 0.26 -2.4 3,724,682 - AO356_16485 0.26 +0.2 3,724,729 - AO356_16485 0.29 -1.3 3,724,729 - AO356_16485 0.29 -0.1 3,724,787 - AO356_16485 0.32 -1.3 3,724,802 - AO356_16485 0.33 -0.4 3,724,802 - AO356_16485 0.33 +0.0 3,724,825 - AO356_16485 0.34 -1.3 3,724,825 - AO356_16485 0.34 -0.1 3,724,904 - AO356_16485 0.39 -1.0 3,724,931 - AO356_16485 0.40 -1.3 3,725,036 - AO356_16485 0.46 -0.5 3,725,114 - AO356_16485 0.51 +0.9 3,725,186 - AO356_16485 0.55 -4.0 3,725,186 - AO356_16485 0.55 +0.5 3,725,541 - AO356_16485 0.76 -0.3 3,725,543 - AO356_16485 0.76 +0.7 3,725,543 - AO356_16485 0.76 -0.5 3,725,543 - AO356_16485 0.76 +0.2 3,725,543 - AO356_16485 0.76 -2.3 3,725,543 - AO356_16485 0.76 -1.5 3,725,543 - AO356_16485 0.76 -0.3 3,725,543 - AO356_16485 0.76 -0.9 3,725,543 - AO356_16485 0.76 -0.7 3,725,543 - AO356_16485 0.76 -1.9 3,725,675 - AO356_16485 0.83 -1.6 3,725,741 - AO356_16485 0.87 -0.6 3,725,741 - AO356_16485 0.87 -0.0 3,725,741 - AO356_16485 0.87 -1.3 3,725,741 - AO356_16485 0.87 -0.3 3,725,741 - AO356_16485 0.87 +0.1 3,725,741 - AO356_16485 0.87 -2.0 3,725,741 - AO356_16485 0.87 -0.9 3,725,741 - AO356_16485 0.87 +0.5 3,725,955 - +0.6 3,725,955 - +1.0 3,725,955 - +0.9 3,725,955 - +0.7 3,725,955 - +1.5 3,725,955 - +0.6 3,725,955 - +0.1 3,725,955 - +0.5 3,725,955 - +1.1 3,725,955 - +1.0 3,725,961 - -0.7 3,725,961 - +1.2 3,725,961 - -1.0 3,725,961 - +0.1 3,725,961 - -1.0 3,725,961 - +1.0 3,725,963 - -1.1 3,725,963 - +0.4 3,725,963 - -0.4 3,725,963 - +0.5 3,726,021 + -0.5 3,726,021 + +1.3 3,726,038 + -0.5 3,726,039 - -0.2 3,726,058 + +0.1 3,726,059 - -0.7 3,726,092 + +0.6 3,726,092 + +1.0
Or see this region's nucleotide sequence