Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16335 and AO356_16340 overlap by 4 nucleotides AO356_16340 and AO356_16345 are separated by 15 nucleotides
AO356_16335: AO356_16335 - hypothetical protein, at 3,692,575 to 3,693,942
_16335
AO356_16340: AO356_16340 - hypothetical protein, at 3,693,939 to 3,694,559
_16340
AO356_16345: AO356_16345 - alkylhalidase, at 3,694,575 to 3,696,287
_16345
Position (kb)
3693
3694
3695 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3692.944 kb on + strand, within AO356_16335 at 3692.947 kb on + strand, within AO356_16335 at 3692.948 kb on - strand, within AO356_16335 at 3692.948 kb on - strand, within AO356_16335 at 3692.948 kb on - strand, within AO356_16335 at 3692.948 kb on - strand, within AO356_16335 at 3692.948 kb on - strand, within AO356_16335 at 3693.246 kb on + strand, within AO356_16335 at 3693.246 kb on + strand, within AO356_16335 at 3693.247 kb on - strand, within AO356_16335 at 3693.319 kb on + strand, within AO356_16335 at 3693.319 kb on + strand, within AO356_16335 at 3693.319 kb on + strand, within AO356_16335 at 3693.319 kb on + strand, within AO356_16335 at 3693.320 kb on - strand, within AO356_16335 at 3693.320 kb on - strand, within AO356_16335 at 3693.320 kb on - strand, within AO356_16335 at 3693.320 kb on - strand, within AO356_16335 at 3693.320 kb on - strand, within AO356_16335 at 3693.320 kb on - strand, within AO356_16335 at 3693.320 kb on - strand, within AO356_16335 at 3693.320 kb on - strand, within AO356_16335 at 3693.619 kb on + strand, within AO356_16335 at 3693.619 kb on + strand, within AO356_16335 at 3693.620 kb on - strand, within AO356_16335 at 3693.620 kb on - strand, within AO356_16335 at 3693.669 kb on + strand, within AO356_16335 at 3693.669 kb on + strand, within AO356_16335 at 3693.669 kb on + strand, within AO356_16335 at 3693.670 kb on - strand, within AO356_16335 at 3693.736 kb on + strand, within AO356_16335 at 3693.736 kb on + strand, within AO356_16335 at 3693.737 kb on - strand, within AO356_16335 at 3693.737 kb on - strand, within AO356_16335 at 3693.770 kb on + strand, within AO356_16335 at 3693.770 kb on + strand, within AO356_16335 at 3693.770 kb on + strand, within AO356_16335 at 3693.770 kb on + strand, within AO356_16335 at 3693.771 kb on - strand, within AO356_16335 at 3693.771 kb on - strand, within AO356_16335 at 3693.771 kb on - strand, within AO356_16335 at 3693.771 kb on - strand, within AO356_16335 at 3693.771 kb on - strand, within AO356_16335 at 3693.859 kb on + strand at 3693.859 kb on + strand at 3693.859 kb on + strand at 3693.860 kb on - strand at 3693.993 kb on + strand at 3693.993 kb on + strand at 3693.993 kb on + strand at 3693.994 kb on - strand at 3693.994 kb on - strand at 3693.994 kb on - strand at 3693.994 kb on - strand at 3693.994 kb on - strand at 3694.113 kb on + strand, within AO356_16340 at 3694.114 kb on - strand, within AO356_16340 at 3694.164 kb on + strand, within AO356_16340 at 3694.164 kb on + strand, within AO356_16340 at 3694.164 kb on + strand, within AO356_16340 at 3694.165 kb on - strand, within AO356_16340 at 3694.315 kb on - strand, within AO356_16340 at 3694.315 kb on - strand, within AO356_16340 at 3694.315 kb on - strand, within AO356_16340 at 3694.558 kb on - strand at 3694.558 kb on - strand at 3694.565 kb on + strand at 3694.565 kb on + strand at 3694.565 kb on + strand at 3694.566 kb on - strand at 3694.566 kb on - strand at 3694.566 kb on - strand at 3694.566 kb on - strand at 3694.566 kb on - strand at 3694.568 kb on + strand at 3694.598 kb on + strand at 3694.599 kb on - strand at 3694.599 kb on - strand at 3695.008 kb on + strand, within AO356_16345 at 3695.008 kb on + strand, within AO356_16345 at 3695.015 kb on - strand, within AO356_16345 at 3695.052 kb on + strand, within AO356_16345 at 3695.052 kb on + strand, within AO356_16345 at 3695.078 kb on + strand, within AO356_16345 at 3695.079 kb on - strand, within AO356_16345 at 3695.112 kb on + strand, within AO356_16345 at 3695.112 kb on + strand, within AO356_16345 at 3695.113 kb on - strand, within AO356_16345 at 3695.124 kb on + strand, within AO356_16345 at 3695.124 kb on + strand, within AO356_16345 at 3695.148 kb on + strand, within AO356_16345 at 3695.148 kb on + strand, within AO356_16345 at 3695.149 kb on - strand, within AO356_16345 at 3695.249 kb on + strand, within AO356_16345 at 3695.250 kb on - strand, within AO356_16345 at 3695.253 kb on + strand, within AO356_16345 at 3695.253 kb on + strand, within AO356_16345 at 3695.253 kb on + strand, within AO356_16345 at 3695.253 kb on + strand, within AO356_16345 at 3695.253 kb on + strand, within AO356_16345 at 3695.253 kb on + strand, within AO356_16345 at 3695.254 kb on - strand, within AO356_16345 at 3695.254 kb on - strand, within AO356_16345 at 3695.254 kb on - strand, within AO356_16345 at 3695.254 kb on - strand, within AO356_16345 at 3695.264 kb on + strand, within AO356_16345 at 3695.264 kb on + strand, within AO356_16345 at 3695.265 kb on - strand, within AO356_16345 at 3695.267 kb on + strand, within AO356_16345 at 3695.267 kb on + strand, within AO356_16345 at 3695.267 kb on + strand, within AO356_16345 at 3695.267 kb on + strand, within AO356_16345 at 3695.267 kb on + strand, within AO356_16345 at 3695.268 kb on - strand, within AO356_16345 at 3695.268 kb on - strand, within AO356_16345 at 3695.268 kb on - strand, within AO356_16345 at 3695.268 kb on - strand, within AO356_16345 at 3695.268 kb on - strand, within AO356_16345 at 3695.268 kb on - strand, within AO356_16345 at 3695.322 kb on + strand, within AO356_16345 at 3695.415 kb on + strand, within AO356_16345 at 3695.415 kb on + strand, within AO356_16345 at 3695.416 kb on - strand, within AO356_16345 at 3695.416 kb on - strand, within AO356_16345 at 3695.427 kb on + strand, within AO356_16345 at 3695.427 kb on + strand, within AO356_16345 at 3695.427 kb on + strand, within AO356_16345 at 3695.427 kb on + strand, within AO356_16345 at 3695.428 kb on - strand, within AO356_16345 at 3695.428 kb on - strand, within AO356_16345 at 3695.428 kb on - strand, within AO356_16345 at 3695.428 kb on - strand, within AO356_16345 at 3695.547 kb on + strand, within AO356_16345 at 3695.548 kb on - strand, within AO356_16345
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 3,692,944 + AO356_16335 0.27 +0.9 3,692,947 + AO356_16335 0.27 +1.2 3,692,948 - AO356_16335 0.27 -0.4 3,692,948 - AO356_16335 0.27 +0.3 3,692,948 - AO356_16335 0.27 +0.5 3,692,948 - AO356_16335 0.27 -0.0 3,692,948 - AO356_16335 0.27 -0.3 3,693,246 + AO356_16335 0.49 -0.4 3,693,246 + AO356_16335 0.49 +0.8 3,693,247 - AO356_16335 0.49 +0.9 3,693,319 + AO356_16335 0.54 +0.3 3,693,319 + AO356_16335 0.54 -1.5 3,693,319 + AO356_16335 0.54 +0.0 3,693,319 + AO356_16335 0.54 -0.1 3,693,320 - AO356_16335 0.54 -1.1 3,693,320 - AO356_16335 0.54 -0.2 3,693,320 - AO356_16335 0.54 -1.2 3,693,320 - AO356_16335 0.54 -0.2 3,693,320 - AO356_16335 0.54 -0.6 3,693,320 - AO356_16335 0.54 +0.7 3,693,320 - AO356_16335 0.54 -0.3 3,693,320 - AO356_16335 0.54 -0.1 3,693,619 + AO356_16335 0.76 -0.6 3,693,619 + AO356_16335 0.76 +0.9 3,693,620 - AO356_16335 0.76 -0.6 3,693,620 - AO356_16335 0.76 -1.9 3,693,669 + AO356_16335 0.80 -0.5 3,693,669 + AO356_16335 0.80 -0.6 3,693,669 + AO356_16335 0.80 -0.8 3,693,670 - AO356_16335 0.80 +0.5 3,693,736 + AO356_16335 0.85 -0.2 3,693,736 + AO356_16335 0.85 +0.5 3,693,737 - AO356_16335 0.85 -0.1 3,693,737 - AO356_16335 0.85 -0.5 3,693,770 + AO356_16335 0.87 -0.4 3,693,770 + AO356_16335 0.87 +2.3 3,693,770 + AO356_16335 0.87 -1.2 3,693,770 + AO356_16335 0.87 -0.3 3,693,771 - AO356_16335 0.87 +0.6 3,693,771 - AO356_16335 0.87 +0.7 3,693,771 - AO356_16335 0.87 +0.9 3,693,771 - AO356_16335 0.87 -0.4 3,693,771 - AO356_16335 0.87 -0.6 3,693,859 + +0.5 3,693,859 + -0.8 3,693,859 + +0.6 3,693,860 - +0.4 3,693,993 + +0.0 3,693,993 + -0.5 3,693,993 + +0.0 3,693,994 - -0.9 3,693,994 - +0.7 3,693,994 - +0.7 3,693,994 - -0.1 3,693,994 - -0.3 3,694,113 + AO356_16340 0.28 +0.5 3,694,114 - AO356_16340 0.28 +1.2 3,694,164 + AO356_16340 0.36 +0.8 3,694,164 + AO356_16340 0.36 -0.1 3,694,164 + AO356_16340 0.36 -1.5 3,694,165 - AO356_16340 0.36 +0.8 3,694,315 - AO356_16340 0.61 +0.7 3,694,315 - AO356_16340 0.61 -1.4 3,694,315 - AO356_16340 0.61 +0.6 3,694,558 - +0.7 3,694,558 - +0.5 3,694,565 + -0.1 3,694,565 + -0.8 3,694,565 + -1.3 3,694,566 - +0.1 3,694,566 - -1.0 3,694,566 - -0.8 3,694,566 - +0.3 3,694,566 - +0.2 3,694,568 + -0.5 3,694,598 + -0.9 3,694,599 - -0.7 3,694,599 - -0.1 3,695,008 + AO356_16345 0.25 +0.2 3,695,008 + AO356_16345 0.25 +0.2 3,695,015 - AO356_16345 0.26 +0.4 3,695,052 + AO356_16345 0.28 -1.5 3,695,052 + AO356_16345 0.28 +0.9 3,695,078 + AO356_16345 0.29 -0.5 3,695,079 - AO356_16345 0.29 -2.5 3,695,112 + AO356_16345 0.31 -0.4 3,695,112 + AO356_16345 0.31 +0.8 3,695,113 - AO356_16345 0.31 +1.0 3,695,124 + AO356_16345 0.32 -0.6 3,695,124 + AO356_16345 0.32 -0.6 3,695,148 + AO356_16345 0.33 +1.2 3,695,148 + AO356_16345 0.33 +0.3 3,695,149 - AO356_16345 0.34 +1.1 3,695,249 + AO356_16345 0.39 -0.9 3,695,250 - AO356_16345 0.39 -0.1 3,695,253 + AO356_16345 0.40 +0.4 3,695,253 + AO356_16345 0.40 -1.4 3,695,253 + AO356_16345 0.40 +0.2 3,695,253 + AO356_16345 0.40 -0.1 3,695,253 + AO356_16345 0.40 +0.1 3,695,253 + AO356_16345 0.40 -0.7 3,695,254 - AO356_16345 0.40 -0.4 3,695,254 - AO356_16345 0.40 +0.9 3,695,254 - AO356_16345 0.40 -0.8 3,695,254 - AO356_16345 0.40 -0.4 3,695,264 + AO356_16345 0.40 -0.9 3,695,264 + AO356_16345 0.40 +0.4 3,695,265 - AO356_16345 0.40 -0.0 3,695,267 + AO356_16345 0.40 -0.1 3,695,267 + AO356_16345 0.40 -2.4 3,695,267 + AO356_16345 0.40 -0.8 3,695,267 + AO356_16345 0.40 +0.4 3,695,267 + AO356_16345 0.40 +0.7 3,695,268 - AO356_16345 0.40 +0.7 3,695,268 - AO356_16345 0.40 -0.7 3,695,268 - AO356_16345 0.40 +0.6 3,695,268 - AO356_16345 0.40 +0.3 3,695,268 - AO356_16345 0.40 +0.4 3,695,268 - AO356_16345 0.40 +1.4 3,695,322 + AO356_16345 0.44 -0.3 3,695,415 + AO356_16345 0.49 +1.3 3,695,415 + AO356_16345 0.49 +0.9 3,695,416 - AO356_16345 0.49 +0.4 3,695,416 - AO356_16345 0.49 +1.5 3,695,427 + AO356_16345 0.50 +0.5 3,695,427 + AO356_16345 0.50 -1.8 3,695,427 + AO356_16345 0.50 -0.1 3,695,427 + AO356_16345 0.50 +0.5 3,695,428 - AO356_16345 0.50 -0.6 3,695,428 - AO356_16345 0.50 -1.0 3,695,428 - AO356_16345 0.50 -0.8 3,695,428 - AO356_16345 0.50 +0.3 3,695,547 + AO356_16345 0.57 -0.5 3,695,548 - AO356_16345 0.57 +0.4
Or see this region's nucleotide sequence