Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16010 and AO356_16015 are separated by 2 nucleotides AO356_16015 and AO356_16020 are separated by 223 nucleotides AO356_16020 and AO356_16025 are separated by 268 nucleotides
AO356_16010: AO356_16010 - type II secretion system protein F, at 3,618,104 to 3,619,321
_16010
AO356_16015: AO356_16015 - general secretion pathway protein GspE, at 3,619,324 to 3,621,033
_16015
AO356_16020: AO356_16020 - fimbrial protein, at 3,621,257 to 3,621,667
_16020
AO356_16025: AO356_16025 - phospholipid-binding protein, at 3,621,936 to 3,622,289
_16025
Position (kb)
3619
3620
3621
3622 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3618.519 kb on + strand, within AO356_16010 at 3618.519 kb on + strand, within AO356_16010 at 3618.520 kb on - strand, within AO356_16010 at 3618.520 kb on - strand, within AO356_16010 at 3618.520 kb on - strand, within AO356_16010 at 3618.520 kb on - strand, within AO356_16010 at 3618.520 kb on - strand, within AO356_16010 at 3618.520 kb on - strand, within AO356_16010 at 3618.520 kb on - strand, within AO356_16010 at 3618.534 kb on - strand, within AO356_16010 at 3618.534 kb on - strand, within AO356_16010 at 3618.534 kb on - strand, within AO356_16010 at 3618.542 kb on + strand, within AO356_16010 at 3618.543 kb on - strand, within AO356_16010 at 3618.543 kb on - strand, within AO356_16010 at 3618.543 kb on - strand, within AO356_16010 at 3618.601 kb on - strand, within AO356_16010 at 3618.601 kb on - strand, within AO356_16010 at 3618.601 kb on - strand, within AO356_16010 at 3618.623 kb on + strand, within AO356_16010 at 3618.623 kb on + strand, within AO356_16010 at 3618.623 kb on + strand, within AO356_16010 at 3618.623 kb on + strand, within AO356_16010 at 3618.624 kb on - strand, within AO356_16010 at 3618.624 kb on - strand, within AO356_16010 at 3618.624 kb on - strand, within AO356_16010 at 3618.624 kb on - strand, within AO356_16010 at 3618.702 kb on - strand, within AO356_16010 at 3618.702 kb on - strand, within AO356_16010 at 3618.788 kb on + strand, within AO356_16010 at 3618.789 kb on - strand, within AO356_16010 at 3618.804 kb on + strand, within AO356_16010 at 3618.855 kb on + strand, within AO356_16010 at 3618.855 kb on + strand, within AO356_16010 at 3618.855 kb on + strand, within AO356_16010 at 3618.856 kb on - strand, within AO356_16010 at 3618.856 kb on - strand, within AO356_16010 at 3618.856 kb on - strand, within AO356_16010 at 3618.856 kb on - strand, within AO356_16010 at 3618.881 kb on - strand, within AO356_16010 at 3618.924 kb on + strand, within AO356_16010 at 3618.925 kb on - strand, within AO356_16010 at 3618.940 kb on - strand, within AO356_16010 at 3619.288 kb on + strand at 3619.288 kb on + strand at 3619.288 kb on + strand at 3619.288 kb on + strand at 3619.288 kb on + strand at 3619.288 kb on + strand at 3619.288 kb on + strand at 3619.289 kb on - strand at 3619.289 kb on - strand at 3619.289 kb on - strand at 3619.289 kb on - strand at 3619.289 kb on - strand at 3619.289 kb on - strand at 3619.289 kb on - strand at 3619.289 kb on - strand at 3619.289 kb on - strand at 3619.289 kb on - strand at 3619.289 kb on - strand at 3619.289 kb on - strand at 3619.289 kb on - strand at 3619.289 kb on - strand at 3619.290 kb on + strand at 3619.290 kb on + strand at 3619.290 kb on + strand at 3619.290 kb on + strand at 3619.290 kb on + strand at 3619.290 kb on + strand at 3619.291 kb on - strand at 3619.291 kb on - strand at 3619.291 kb on - strand at 3619.291 kb on - strand at 3619.291 kb on - strand at 3619.291 kb on - strand at 3619.291 kb on - strand at 3619.291 kb on - strand at 3619.502 kb on + strand, within AO356_16015 at 3619.502 kb on + strand, within AO356_16015 at 3619.502 kb on + strand, within AO356_16015 at 3619.503 kb on - strand, within AO356_16015 at 3619.524 kb on - strand, within AO356_16015 at 3619.524 kb on - strand, within AO356_16015 at 3619.524 kb on - strand, within AO356_16015 at 3619.559 kb on + strand, within AO356_16015 at 3619.559 kb on + strand, within AO356_16015 at 3619.559 kb on + strand, within AO356_16015 at 3619.560 kb on - strand, within AO356_16015 at 3619.993 kb on - strand, within AO356_16015 at 3620.002 kb on - strand, within AO356_16015 at 3620.015 kb on + strand, within AO356_16015 at 3620.016 kb on - strand, within AO356_16015 at 3620.093 kb on + strand, within AO356_16015 at 3620.093 kb on + strand, within AO356_16015 at 3620.093 kb on + strand, within AO356_16015 at 3620.093 kb on + strand, within AO356_16015 at 3620.093 kb on + strand, within AO356_16015 at 3620.093 kb on + strand, within AO356_16015 at 3620.093 kb on + strand, within AO356_16015 at 3620.093 kb on + strand, within AO356_16015 at 3620.093 kb on + strand, within AO356_16015 at 3620.093 kb on + strand, within AO356_16015 at 3620.093 kb on + strand, within AO356_16015 at 3620.094 kb on - strand, within AO356_16015 at 3620.094 kb on - strand, within AO356_16015 at 3620.094 kb on - strand, within AO356_16015 at 3620.094 kb on - strand, within AO356_16015 at 3620.094 kb on - strand, within AO356_16015 at 3620.094 kb on - strand, within AO356_16015 at 3620.094 kb on - strand, within AO356_16015 at 3620.094 kb on - strand, within AO356_16015 at 3620.094 kb on - strand, within AO356_16015 at 3620.094 kb on - strand, within AO356_16015 at 3620.094 kb on - strand, within AO356_16015 at 3620.094 kb on - strand, within AO356_16015 at 3620.284 kb on - strand, within AO356_16015 at 3620.284 kb on - strand, within AO356_16015 at 3620.284 kb on - strand, within AO356_16015 at 3620.402 kb on + strand, within AO356_16015 at 3620.403 kb on - strand, within AO356_16015 at 3620.403 kb on - strand, within AO356_16015 at 3620.403 kb on - strand, within AO356_16015 at 3620.595 kb on + strand, within AO356_16015 at 3620.595 kb on + strand, within AO356_16015 at 3620.596 kb on - strand, within AO356_16015 at 3620.596 kb on - strand, within AO356_16015 at 3620.596 kb on - strand, within AO356_16015 at 3620.645 kb on - strand, within AO356_16015 at 3620.645 kb on - strand, within AO356_16015 at 3620.674 kb on - strand, within AO356_16015 at 3620.912 kb on + strand at 3620.912 kb on + strand at 3620.912 kb on + strand at 3620.912 kb on + strand at 3620.912 kb on + strand at 3620.912 kb on + strand at 3620.913 kb on - strand at 3620.913 kb on - strand at 3620.913 kb on - strand at 3620.951 kb on + strand at 3620.951 kb on + strand at 3620.952 kb on - strand at 3620.952 kb on - strand at 3621.064 kb on + strand at 3621.064 kb on + strand at 3621.064 kb on + strand at 3621.064 kb on + strand at 3621.064 kb on + strand at 3621.064 kb on + strand at 3621.064 kb on + strand at 3621.064 kb on + strand at 3621.064 kb on + strand at 3621.064 kb on + strand at 3621.065 kb on - strand at 3621.065 kb on - strand at 3621.065 kb on - strand at 3621.065 kb on - strand at 3621.065 kb on - strand at 3621.065 kb on - strand at 3621.065 kb on - strand at 3621.065 kb on - strand at 3621.065 kb on - strand at 3621.065 kb on - strand at 3621.066 kb on + strand at 3621.066 kb on + strand at 3621.066 kb on + strand at 3621.066 kb on + strand at 3621.067 kb on - strand at 3621.067 kb on - strand at 3621.067 kb on - strand at 3621.067 kb on - strand at 3621.071 kb on + strand at 3621.071 kb on + strand at 3621.072 kb on - strand at 3621.072 kb on - strand at 3621.123 kb on + strand at 3621.123 kb on + strand at 3621.124 kb on - strand at 3621.140 kb on + strand at 3621.141 kb on - strand at 3621.141 kb on - strand at 3621.173 kb on + strand at 3621.256 kb on + strand at 3621.256 kb on + strand at 3621.256 kb on + strand at 3621.256 kb on + strand at 3621.256 kb on + strand at 3621.256 kb on + strand at 3621.257 kb on - strand at 3621.257 kb on - strand at 3621.257 kb on - strand at 3621.257 kb on - strand at 3621.257 kb on - strand at 3621.257 kb on - strand at 3621.257 kb on - strand at 3621.262 kb on + strand at 3621.262 kb on + strand at 3621.263 kb on - strand at 3621.263 kb on - strand at 3621.263 kb on - strand at 3621.263 kb on - strand at 3621.277 kb on + strand at 3621.277 kb on + strand at 3621.278 kb on - strand at 3621.345 kb on - strand, within AO356_16020 at 3621.353 kb on + strand, within AO356_16020 at 3621.353 kb on + strand, within AO356_16020 at 3621.354 kb on - strand, within AO356_16020 at 3621.354 kb on - strand, within AO356_16020 at 3621.408 kb on + strand, within AO356_16020 at 3621.409 kb on - strand, within AO356_16020 at 3621.409 kb on - strand, within AO356_16020 at 3621.413 kb on + strand, within AO356_16020 at 3621.413 kb on + strand, within AO356_16020 at 3621.414 kb on - strand, within AO356_16020 at 3621.475 kb on + strand, within AO356_16020 at 3621.475 kb on + strand, within AO356_16020 at 3621.476 kb on - strand, within AO356_16020 at 3621.476 kb on - strand, within AO356_16020 at 3621.476 kb on - strand, within AO356_16020 at 3621.476 kb on - strand, within AO356_16020 at 3621.476 kb on - strand, within AO356_16020 at 3621.476 kb on - strand, within AO356_16020 at 3621.476 kb on - strand, within AO356_16020 at 3621.538 kb on + strand, within AO356_16020 at 3621.539 kb on - strand, within AO356_16020 at 3621.622 kb on + strand, within AO356_16020 at 3621.622 kb on + strand, within AO356_16020 at 3621.622 kb on + strand, within AO356_16020 at 3621.623 kb on - strand, within AO356_16020 at 3621.623 kb on - strand, within AO356_16020 at 3621.623 kb on - strand, within AO356_16020 at 3621.623 kb on - strand, within AO356_16020 at 3621.623 kb on - strand, within AO356_16020 at 3621.706 kb on - strand at 3621.730 kb on - strand at 3621.730 kb on - strand at 3621.839 kb on - strand at 3621.873 kb on - strand at 3621.929 kb on + strand at 3621.930 kb on - strand at 3621.930 kb on - strand at 3621.930 kb on - strand at 3621.935 kb on + strand at 3621.935 kb on + strand at 3621.935 kb on + strand at 3621.936 kb on - strand at 3621.936 kb on - strand at 3621.950 kb on + strand at 3621.950 kb on + strand at 3622.031 kb on + strand, within AO356_16025 at 3622.031 kb on + strand, within AO356_16025 at 3622.031 kb on + strand, within AO356_16025 at 3622.031 kb on + strand, within AO356_16025 at 3622.031 kb on + strand, within AO356_16025 at 3622.031 kb on + strand, within AO356_16025 at 3622.032 kb on - strand, within AO356_16025 at 3622.032 kb on - strand, within AO356_16025 at 3622.032 kb on - strand, within AO356_16025 at 3622.032 kb on - strand, within AO356_16025 at 3622.032 kb on - strand, within AO356_16025 at 3622.032 kb on - strand, within AO356_16025 at 3622.032 kb on - strand, within AO356_16025 at 3622.032 kb on - strand, within AO356_16025
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 3,618,519 + AO356_16010 0.34 +2.5 3,618,519 + AO356_16010 0.34 -1.3 3,618,520 - AO356_16010 0.34 +1.4 3,618,520 - AO356_16010 0.34 +1.1 3,618,520 - AO356_16010 0.34 -0.0 3,618,520 - AO356_16010 0.34 +0.2 3,618,520 - AO356_16010 0.34 -0.8 3,618,520 - AO356_16010 0.34 +1.9 3,618,520 - AO356_16010 0.34 -0.3 3,618,534 - AO356_16010 0.35 -0.4 3,618,534 - AO356_16010 0.35 +1.5 3,618,534 - AO356_16010 0.35 -0.6 3,618,542 + AO356_16010 0.36 -1.1 3,618,543 - AO356_16010 0.36 -0.2 3,618,543 - AO356_16010 0.36 +0.6 3,618,543 - AO356_16010 0.36 +0.2 3,618,601 - AO356_16010 0.41 -1.0 3,618,601 - AO356_16010 0.41 -0.1 3,618,601 - AO356_16010 0.41 +0.5 3,618,623 + AO356_16010 0.43 -0.7 3,618,623 + AO356_16010 0.43 +0.1 3,618,623 + AO356_16010 0.43 +0.0 3,618,623 + AO356_16010 0.43 -1.0 3,618,624 - AO356_16010 0.43 +0.1 3,618,624 - AO356_16010 0.43 +1.3 3,618,624 - AO356_16010 0.43 +0.3 3,618,624 - AO356_16010 0.43 +1.5 3,618,702 - AO356_16010 0.49 +0.0 3,618,702 - AO356_16010 0.49 -0.8 3,618,788 + AO356_16010 0.56 -0.5 3,618,789 - AO356_16010 0.56 -0.8 3,618,804 + AO356_16010 0.57 -0.9 3,618,855 + AO356_16010 0.62 +0.1 3,618,855 + AO356_16010 0.62 -1.1 3,618,855 + AO356_16010 0.62 -0.2 3,618,856 - AO356_16010 0.62 -0.8 3,618,856 - AO356_16010 0.62 +0.6 3,618,856 - AO356_16010 0.62 -0.4 3,618,856 - AO356_16010 0.62 +0.4 3,618,881 - AO356_16010 0.64 -1.2 3,618,924 + AO356_16010 0.67 -0.7 3,618,925 - AO356_16010 0.67 -0.5 3,618,940 - AO356_16010 0.69 +0.7 3,619,288 + +0.5 3,619,288 + -1.5 3,619,288 + -0.4 3,619,288 + +0.9 3,619,288 + +0.4 3,619,288 + -1.3 3,619,288 + +1.1 3,619,289 - +0.7 3,619,289 - -0.0 3,619,289 - +0.1 3,619,289 - -1.4 3,619,289 - -0.3 3,619,289 - -0.6 3,619,289 - +0.2 3,619,289 - -0.3 3,619,289 - +0.6 3,619,289 - -0.3 3,619,289 - -0.5 3,619,289 - +0.6 3,619,289 - -0.2 3,619,289 - +0.2 3,619,290 + +1.1 3,619,290 + +0.2 3,619,290 + +0.4 3,619,290 + +1.2 3,619,290 + +0.9 3,619,290 + -2.1 3,619,291 - -0.1 3,619,291 - -0.6 3,619,291 - +0.6 3,619,291 - +0.2 3,619,291 - +1.2 3,619,291 - -0.2 3,619,291 - +0.2 3,619,291 - +0.6 3,619,502 + AO356_16015 0.10 +0.1 3,619,502 + AO356_16015 0.10 -0.7 3,619,502 + AO356_16015 0.10 +1.0 3,619,503 - AO356_16015 0.10 -0.1 3,619,524 - AO356_16015 0.12 +0.8 3,619,524 - AO356_16015 0.12 +0.2 3,619,524 - AO356_16015 0.12 -0.1 3,619,559 + AO356_16015 0.14 -0.9 3,619,559 + AO356_16015 0.14 +0.1 3,619,559 + AO356_16015 0.14 -0.8 3,619,560 - AO356_16015 0.14 +0.1 3,619,993 - AO356_16015 0.39 +0.3 3,620,002 - AO356_16015 0.40 +0.3 3,620,015 + AO356_16015 0.40 +0.7 3,620,016 - AO356_16015 0.40 -0.8 3,620,093 + AO356_16015 0.45 -0.4 3,620,093 + AO356_16015 0.45 -1.6 3,620,093 + AO356_16015 0.45 +0.7 3,620,093 + AO356_16015 0.45 +1.3 3,620,093 + AO356_16015 0.45 -0.3 3,620,093 + AO356_16015 0.45 -0.3 3,620,093 + AO356_16015 0.45 +0.1 3,620,093 + AO356_16015 0.45 -0.1 3,620,093 + AO356_16015 0.45 +0.4 3,620,093 + AO356_16015 0.45 -0.0 3,620,093 + AO356_16015 0.45 +0.2 3,620,094 - AO356_16015 0.45 +0.4 3,620,094 - AO356_16015 0.45 -0.3 3,620,094 - AO356_16015 0.45 +0.2 3,620,094 - AO356_16015 0.45 -1.0 3,620,094 - AO356_16015 0.45 -1.1 3,620,094 - AO356_16015 0.45 -1.4 3,620,094 - AO356_16015 0.45 +0.2 3,620,094 - AO356_16015 0.45 -0.7 3,620,094 - AO356_16015 0.45 -1.1 3,620,094 - AO356_16015 0.45 +0.1 3,620,094 - AO356_16015 0.45 -1.2 3,620,094 - AO356_16015 0.45 +0.3 3,620,284 - AO356_16015 0.56 -0.7 3,620,284 - AO356_16015 0.56 -0.9 3,620,284 - AO356_16015 0.56 +0.0 3,620,402 + AO356_16015 0.63 -0.5 3,620,403 - AO356_16015 0.63 +1.4 3,620,403 - AO356_16015 0.63 +1.5 3,620,403 - AO356_16015 0.63 -0.4 3,620,595 + AO356_16015 0.74 -0.2 3,620,595 + AO356_16015 0.74 -0.8 3,620,596 - AO356_16015 0.74 -0.3 3,620,596 - AO356_16015 0.74 -1.9 3,620,596 - AO356_16015 0.74 -0.4 3,620,645 - AO356_16015 0.77 +0.5 3,620,645 - AO356_16015 0.77 -0.8 3,620,674 - AO356_16015 0.79 -0.1 3,620,912 + +0.3 3,620,912 + -0.8 3,620,912 + -1.2 3,620,912 + -0.7 3,620,912 + +0.7 3,620,912 + +0.1 3,620,913 - +1.2 3,620,913 - -0.1 3,620,913 - +0.5 3,620,951 + +0.1 3,620,951 + +0.9 3,620,952 - -0.0 3,620,952 - -0.2 3,621,064 + -1.0 3,621,064 + +0.5 3,621,064 + +0.1 3,621,064 + -1.6 3,621,064 + +0.3 3,621,064 + -0.1 3,621,064 + -0.2 3,621,064 + +0.5 3,621,064 + -0.2 3,621,064 + +0.6 3,621,065 - +0.9 3,621,065 - +0.2 3,621,065 - +0.7 3,621,065 - +0.3 3,621,065 - +0.5 3,621,065 - +0.5 3,621,065 - -1.5 3,621,065 - -1.0 3,621,065 - -0.3 3,621,065 - +0.6 3,621,066 + -0.5 3,621,066 + -1.1 3,621,066 + +0.2 3,621,066 + -0.6 3,621,067 - -0.9 3,621,067 - -0.9 3,621,067 - +1.0 3,621,067 - -0.1 3,621,071 + +0.1 3,621,071 + -1.5 3,621,072 - +0.0 3,621,072 - -0.9 3,621,123 + -1.8 3,621,123 + +0.1 3,621,124 - +0.5 3,621,140 + -0.7 3,621,141 - +0.8 3,621,141 - +0.0 3,621,173 + +0.8 3,621,256 + +1.1 3,621,256 + +0.6 3,621,256 + +0.2 3,621,256 + -1.2 3,621,256 + +0.6 3,621,256 + -0.8 3,621,257 - +0.2 3,621,257 - -0.0 3,621,257 - +0.7 3,621,257 - +0.8 3,621,257 - +0.3 3,621,257 - -1.6 3,621,257 - -0.8 3,621,262 + -0.7 3,621,262 + +1.0 3,621,263 - +0.1 3,621,263 - +0.4 3,621,263 - -1.1 3,621,263 - -0.6 3,621,277 + -0.5 3,621,277 + +1.0 3,621,278 - +0.3 3,621,345 - AO356_16020 0.21 +2.3 3,621,353 + AO356_16020 0.23 -1.3 3,621,353 + AO356_16020 0.23 -0.2 3,621,354 - AO356_16020 0.24 +0.6 3,621,354 - AO356_16020 0.24 +0.4 3,621,408 + AO356_16020 0.37 +0.6 3,621,409 - AO356_16020 0.37 +0.7 3,621,409 - AO356_16020 0.37 -0.4 3,621,413 + AO356_16020 0.38 +0.6 3,621,413 + AO356_16020 0.38 +0.3 3,621,414 - AO356_16020 0.38 -0.4 3,621,475 + AO356_16020 0.53 +1.7 3,621,475 + AO356_16020 0.53 +0.3 3,621,476 - AO356_16020 0.53 +0.2 3,621,476 - AO356_16020 0.53 +0.1 3,621,476 - AO356_16020 0.53 -0.2 3,621,476 - AO356_16020 0.53 +0.2 3,621,476 - AO356_16020 0.53 +0.2 3,621,476 - AO356_16020 0.53 +0.4 3,621,476 - AO356_16020 0.53 +0.5 3,621,538 + AO356_16020 0.68 -0.2 3,621,539 - AO356_16020 0.69 +0.4 3,621,622 + AO356_16020 0.89 -0.6 3,621,622 + AO356_16020 0.89 +1.1 3,621,622 + AO356_16020 0.89 +0.7 3,621,623 - AO356_16020 0.89 +0.6 3,621,623 - AO356_16020 0.89 +0.3 3,621,623 - AO356_16020 0.89 -1.7 3,621,623 - AO356_16020 0.89 -0.1 3,621,623 - AO356_16020 0.89 +0.6 3,621,706 - +0.4 3,621,730 - -0.1 3,621,730 - +2.3 3,621,839 - +0.6 3,621,873 - -0.1 3,621,929 + -0.7 3,621,930 - -2.3 3,621,930 - +0.1 3,621,930 - -0.1 3,621,935 + +0.4 3,621,935 + -0.5 3,621,935 + -0.8 3,621,936 - +0.2 3,621,936 - -0.1 3,621,950 + -2.8 3,621,950 + -0.1 3,622,031 + AO356_16025 0.27 -0.8 3,622,031 + AO356_16025 0.27 +0.2 3,622,031 + AO356_16025 0.27 -0.2 3,622,031 + AO356_16025 0.27 +0.3 3,622,031 + AO356_16025 0.27 +0.1 3,622,031 + AO356_16025 0.27 -2.3 3,622,032 - AO356_16025 0.27 -0.1 3,622,032 - AO356_16025 0.27 -0.6 3,622,032 - AO356_16025 0.27 -1.6 3,622,032 - AO356_16025 0.27 +0.2 3,622,032 - AO356_16025 0.27 -1.3 3,622,032 - AO356_16025 0.27 +0.3 3,622,032 - AO356_16025 0.27 +0.3 3,622,032 - AO356_16025 0.27 -0.4
Or see this region's nucleotide sequence