Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_13435 and AO356_13440 are separated by 249 nucleotides AO356_13440 and AO356_13445 are separated by 123 nucleotides
AO356_13435: AO356_13435 - peptidase P60, at 3,046,925 to 3,047,536
_13435
AO356_13440: AO356_13440 - hypothetical protein, at 3,047,786 to 3,048,214
_13440
AO356_13445: AO356_13445 - dihydroorotase, at 3,048,338 to 3,049,609
_13445
Position (kb)
3047
3048
3049 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3046.982 kb on + strand at 3046.982 kb on + strand at 3046.982 kb on + strand at 3046.982 kb on + strand at 3046.982 kb on + strand at 3046.982 kb on + strand at 3046.983 kb on - strand at 3046.983 kb on - strand at 3046.983 kb on - strand at 3046.983 kb on - strand at 3046.983 kb on - strand at 3046.983 kb on - strand at 3046.983 kb on - strand at 3046.983 kb on - strand at 3046.986 kb on + strand at 3046.986 kb on + strand at 3046.986 kb on + strand at 3046.986 kb on + strand at 3046.987 kb on - strand, within AO356_13435 at 3046.987 kb on - strand, within AO356_13435 at 3047.002 kb on - strand, within AO356_13435 at 3047.002 kb on - strand, within AO356_13435 at 3047.002 kb on - strand, within AO356_13435 at 3047.076 kb on + strand, within AO356_13435 at 3047.076 kb on + strand, within AO356_13435 at 3047.076 kb on + strand, within AO356_13435 at 3047.076 kb on + strand, within AO356_13435 at 3047.076 kb on + strand, within AO356_13435 at 3047.076 kb on + strand, within AO356_13435 at 3047.076 kb on + strand, within AO356_13435 at 3047.077 kb on - strand, within AO356_13435 at 3047.077 kb on - strand, within AO356_13435 at 3047.077 kb on - strand, within AO356_13435 at 3047.077 kb on - strand, within AO356_13435 at 3047.153 kb on + strand, within AO356_13435 at 3047.153 kb on + strand, within AO356_13435 at 3047.154 kb on - strand, within AO356_13435 at 3047.226 kb on + strand, within AO356_13435 at 3047.227 kb on - strand, within AO356_13435 at 3047.257 kb on + strand, within AO356_13435 at 3047.257 kb on + strand, within AO356_13435 at 3047.257 kb on + strand, within AO356_13435 at 3047.258 kb on - strand, within AO356_13435 at 3047.258 kb on - strand, within AO356_13435 at 3047.258 kb on - strand, within AO356_13435 at 3047.258 kb on - strand, within AO356_13435 at 3047.283 kb on + strand, within AO356_13435 at 3047.283 kb on + strand, within AO356_13435 at 3047.284 kb on - strand, within AO356_13435 at 3047.298 kb on - strand, within AO356_13435 at 3047.436 kb on + strand, within AO356_13435 at 3047.436 kb on + strand, within AO356_13435 at 3047.436 kb on + strand, within AO356_13435 at 3047.495 kb on + strand at 3047.495 kb on + strand at 3047.495 kb on + strand at 3047.495 kb on + strand at 3047.495 kb on + strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.498 kb on + strand at 3047.499 kb on - strand at 3047.538 kb on - strand at 3047.550 kb on + strand at 3047.550 kb on + strand at 3047.550 kb on + strand at 3047.551 kb on - strand at 3047.570 kb on + strand at 3047.570 kb on + strand at 3047.572 kb on + strand at 3047.572 kb on + strand at 3047.623 kb on + strand at 3047.623 kb on + strand at 3047.623 kb on + strand at 3047.623 kb on + strand at 3047.623 kb on + strand at 3047.623 kb on + strand at 3047.623 kb on + strand at 3047.624 kb on - strand at 3047.624 kb on - strand at 3047.624 kb on - strand at 3047.624 kb on - strand at 3047.795 kb on + strand at 3047.796 kb on - strand at 3047.883 kb on - strand, within AO356_13440 at 3047.883 kb on - strand, within AO356_13440 at 3047.883 kb on - strand, within AO356_13440 at 3047.886 kb on - strand, within AO356_13440 at 3048.020 kb on + strand, within AO356_13440 at 3048.020 kb on + strand, within AO356_13440 at 3048.021 kb on - strand, within AO356_13440 at 3048.066 kb on + strand, within AO356_13440 at 3048.067 kb on - strand, within AO356_13440 at 3048.067 kb on - strand, within AO356_13440 at 3048.067 kb on - strand, within AO356_13440 at 3048.067 kb on - strand, within AO356_13440 at 3048.067 kb on - strand, within AO356_13440 at 3048.077 kb on + strand, within AO356_13440 at 3048.078 kb on - strand, within AO356_13440 at 3048.078 kb on - strand, within AO356_13440 at 3048.078 kb on - strand, within AO356_13440 at 3048.078 kb on - strand, within AO356_13440 at 3048.078 kb on - strand, within AO356_13440 at 3048.078 kb on - strand, within AO356_13440 at 3048.103 kb on + strand, within AO356_13440 at 3048.103 kb on + strand, within AO356_13440 at 3048.104 kb on - strand, within AO356_13440 at 3048.104 kb on - strand, within AO356_13440 at 3048.104 kb on - strand, within AO356_13440 at 3048.107 kb on + strand, within AO356_13440 at 3048.108 kb on - strand, within AO356_13440 at 3048.108 kb on - strand, within AO356_13440 at 3048.108 kb on - strand, within AO356_13440 at 3048.146 kb on + strand, within AO356_13440 at 3048.146 kb on + strand, within AO356_13440 at 3048.146 kb on + strand, within AO356_13440 at 3048.147 kb on - strand, within AO356_13440 at 3048.147 kb on - strand, within AO356_13440 at 3048.147 kb on - strand, within AO356_13440 at 3048.147 kb on - strand, within AO356_13440 at 3048.147 kb on - strand, within AO356_13440 at 3048.147 kb on - strand, within AO356_13440 at 3048.184 kb on + strand at 3048.184 kb on + strand at 3048.184 kb on + strand at 3048.184 kb on + strand at 3048.185 kb on - strand at 3048.185 kb on - strand at 3048.212 kb on + strand at 3048.213 kb on - strand at 3048.230 kb on - strand at 3048.323 kb on - strand at 3048.375 kb on + strand at 3048.832 kb on - strand, within AO356_13445 at 3049.105 kb on - strand, within AO356_13445
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 3,046,982 + -0.9 3,046,982 + +0.1 3,046,982 + +0.5 3,046,982 + -0.2 3,046,982 + -0.7 3,046,982 + -0.6 3,046,983 - +0.4 3,046,983 - +1.0 3,046,983 - -0.6 3,046,983 - +0.3 3,046,983 - +0.1 3,046,983 - -0.7 3,046,983 - +0.5 3,046,983 - -1.1 3,046,986 + +1.4 3,046,986 + +0.5 3,046,986 + +0.3 3,046,986 + +0.6 3,046,987 - AO356_13435 0.10 +1.0 3,046,987 - AO356_13435 0.10 -0.3 3,047,002 - AO356_13435 0.13 -0.9 3,047,002 - AO356_13435 0.13 -0.9 3,047,002 - AO356_13435 0.13 +1.3 3,047,076 + AO356_13435 0.25 +0.3 3,047,076 + AO356_13435 0.25 +0.2 3,047,076 + AO356_13435 0.25 +0.0 3,047,076 + AO356_13435 0.25 +0.6 3,047,076 + AO356_13435 0.25 +0.6 3,047,076 + AO356_13435 0.25 -0.1 3,047,076 + AO356_13435 0.25 -0.8 3,047,077 - AO356_13435 0.25 +1.1 3,047,077 - AO356_13435 0.25 -0.1 3,047,077 - AO356_13435 0.25 +1.0 3,047,077 - AO356_13435 0.25 +0.3 3,047,153 + AO356_13435 0.37 -0.1 3,047,153 + AO356_13435 0.37 +0.9 3,047,154 - AO356_13435 0.37 +1.0 3,047,226 + AO356_13435 0.49 +0.5 3,047,227 - AO356_13435 0.49 +0.4 3,047,257 + AO356_13435 0.54 +0.3 3,047,257 + AO356_13435 0.54 +0.5 3,047,257 + AO356_13435 0.54 +0.4 3,047,258 - AO356_13435 0.54 -0.2 3,047,258 - AO356_13435 0.54 +0.0 3,047,258 - AO356_13435 0.54 +0.3 3,047,258 - AO356_13435 0.54 +0.7 3,047,283 + AO356_13435 0.58 +0.4 3,047,283 + AO356_13435 0.58 -0.6 3,047,284 - AO356_13435 0.59 -0.4 3,047,298 - AO356_13435 0.61 +0.3 3,047,436 + AO356_13435 0.83 +0.3 3,047,436 + AO356_13435 0.83 +0.4 3,047,436 + AO356_13435 0.83 +0.8 3,047,495 + -0.1 3,047,495 + +0.7 3,047,495 + -0.1 3,047,495 + -0.3 3,047,495 + +1.6 3,047,496 - +0.6 3,047,496 - -1.8 3,047,496 - -0.5 3,047,496 - -1.7 3,047,496 - -1.7 3,047,496 - -0.3 3,047,496 - +0.0 3,047,496 - +0.6 3,047,498 + +1.0 3,047,499 - +1.3 3,047,538 - +0.5 3,047,550 + +0.8 3,047,550 + +0.2 3,047,550 + -0.1 3,047,551 - -0.5 3,047,570 + -0.2 3,047,570 + +0.8 3,047,572 + +0.6 3,047,572 + +0.2 3,047,623 + +1.6 3,047,623 + +0.1 3,047,623 + +0.4 3,047,623 + -1.6 3,047,623 + +0.5 3,047,623 + +0.1 3,047,623 + +0.4 3,047,624 - +0.0 3,047,624 - +0.0 3,047,624 - +0.6 3,047,624 - +0.2 3,047,795 + +0.1 3,047,796 - +0.5 3,047,883 - AO356_13440 0.23 +1.3 3,047,883 - AO356_13440 0.23 -0.9 3,047,883 - AO356_13440 0.23 -2.2 3,047,886 - AO356_13440 0.23 +0.2 3,048,020 + AO356_13440 0.55 +0.4 3,048,020 + AO356_13440 0.55 +0.1 3,048,021 - AO356_13440 0.55 +0.6 3,048,066 + AO356_13440 0.65 -0.6 3,048,067 - AO356_13440 0.66 -0.9 3,048,067 - AO356_13440 0.66 -0.1 3,048,067 - AO356_13440 0.66 -0.9 3,048,067 - AO356_13440 0.66 +0.4 3,048,067 - AO356_13440 0.66 -0.2 3,048,077 + AO356_13440 0.68 +0.3 3,048,078 - AO356_13440 0.68 -0.7 3,048,078 - AO356_13440 0.68 -0.2 3,048,078 - AO356_13440 0.68 -0.6 3,048,078 - AO356_13440 0.68 -1.6 3,048,078 - AO356_13440 0.68 -3.0 3,048,078 - AO356_13440 0.68 -1.0 3,048,103 + AO356_13440 0.74 +0.5 3,048,103 + AO356_13440 0.74 +0.2 3,048,104 - AO356_13440 0.74 +0.2 3,048,104 - AO356_13440 0.74 +0.5 3,048,104 - AO356_13440 0.74 -1.4 3,048,107 + AO356_13440 0.75 -0.0 3,048,108 - AO356_13440 0.75 -0.6 3,048,108 - AO356_13440 0.75 -0.3 3,048,108 - AO356_13440 0.75 -1.1 3,048,146 + AO356_13440 0.84 +0.1 3,048,146 + AO356_13440 0.84 -0.3 3,048,146 + AO356_13440 0.84 -0.1 3,048,147 - AO356_13440 0.84 -0.3 3,048,147 - AO356_13440 0.84 -0.5 3,048,147 - AO356_13440 0.84 +0.6 3,048,147 - AO356_13440 0.84 -0.4 3,048,147 - AO356_13440 0.84 +0.5 3,048,147 - AO356_13440 0.84 +0.1 3,048,184 + -0.9 3,048,184 + +0.4 3,048,184 + -0.1 3,048,184 + +0.3 3,048,185 - -0.4 3,048,185 - -0.1 3,048,212 + +1.0 3,048,213 - +0.2 3,048,230 - -0.2 3,048,323 - +0.5 3,048,375 + +0.6 3,048,832 - AO356_13445 0.39 +1.2 3,049,105 - AO356_13445 0.60 +0.6
Or see this region's nucleotide sequence