Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_09730 and AO356_09735 are separated by 85 nucleotides AO356_09735 and AO356_09740 overlap by 4 nucleotides AO356_09740 and AO356_09745 are separated by 577 nucleotides
AO356_09730: AO356_09730 - nitrogen regulation protein NR(I), at 2,208,422 to 2,209,858
_09730
AO356_09735: AO356_09735 - transposase, at 2,209,944 to 2,210,780
_09735
AO356_09740: AO356_09740 - transposase, at 2,210,777 to 2,211,079
_09740
AO356_09745: AO356_09745 - hypothetical protein, at 2,211,657 to 2,212,019
_09745
Position (kb)
2210
2211
2212 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2209.783 kb on + strand at 2209.783 kb on + strand at 2209.784 kb on - strand at 2209.784 kb on - strand at 2209.784 kb on - strand at 2209.784 kb on - strand at 2209.784 kb on - strand at 2209.867 kb on + strand at 2209.921 kb on - strand at 2211.140 kb on + strand at 2211.140 kb on + strand at 2211.266 kb on + strand at 2211.267 kb on - strand at 2211.399 kb on + strand at 2211.451 kb on + strand at 2211.452 kb on - strand at 2211.452 kb on - strand at 2211.452 kb on - strand at 2211.456 kb on - strand at 2211.456 kb on - strand at 2211.485 kb on + strand at 2211.485 kb on + strand at 2211.486 kb on - strand at 2211.512 kb on + strand at 2211.512 kb on + strand at 2211.512 kb on + strand at 2211.513 kb on - strand at 2211.552 kb on + strand at 2211.553 kb on - strand at 2211.579 kb on + strand at 2211.579 kb on + strand at 2211.579 kb on + strand at 2211.600 kb on - strand at 2211.658 kb on + strand at 2211.658 kb on + strand at 2211.658 kb on + strand at 2211.658 kb on + strand at 2211.658 kb on + strand at 2211.658 kb on + strand at 2211.659 kb on - strand at 2211.659 kb on - strand at 2211.659 kb on - strand at 2211.659 kb on - strand at 2211.659 kb on - strand at 2211.659 kb on - strand at 2211.659 kb on - strand at 2212.032 kb on + strand at 2212.032 kb on + strand at 2212.032 kb on + strand at 2212.033 kb on - strand at 2212.033 kb on - strand at 2212.033 kb on - strand at 2212.033 kb on - strand at 2212.033 kb on - strand at 2212.033 kb on - strand at 2212.033 kb on - strand at 2212.061 kb on + strand at 2212.061 kb on + strand at 2212.061 kb on + strand at 2212.061 kb on + strand at 2212.062 kb on - strand at 2212.062 kb on - strand at 2212.079 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 2,209,783 + +1.3 2,209,783 + +0.4 2,209,784 - +0.1 2,209,784 - -1.2 2,209,784 - +0.7 2,209,784 - +0.8 2,209,784 - +0.6 2,209,867 + +0.2 2,209,921 - +1.2 2,211,140 + -0.2 2,211,140 + -0.2 2,211,266 + -0.5 2,211,267 - -1.3 2,211,399 + -1.3 2,211,451 + +0.7 2,211,452 - +1.1 2,211,452 - -0.5 2,211,452 - -0.5 2,211,456 - +0.7 2,211,456 - -1.6 2,211,485 + +0.4 2,211,485 + +0.0 2,211,486 - +0.0 2,211,512 + -1.0 2,211,512 + +0.3 2,211,512 + +0.1 2,211,513 - +1.2 2,211,552 + -1.2 2,211,553 - +0.8 2,211,579 + +0.9 2,211,579 + -2.2 2,211,579 + +0.1 2,211,600 - +1.1 2,211,658 + -0.5 2,211,658 + -0.5 2,211,658 + -0.1 2,211,658 + -1.0 2,211,658 + +1.0 2,211,658 + +0.3 2,211,659 - -0.2 2,211,659 - -1.3 2,211,659 - +0.4 2,211,659 - +0.1 2,211,659 - -0.9 2,211,659 - -1.9 2,211,659 - -0.8 2,212,032 + +0.1 2,212,032 + +0.9 2,212,032 + +1.5 2,212,033 - +0.2 2,212,033 - +0.1 2,212,033 - +0.2 2,212,033 - +0.0 2,212,033 - +1.2 2,212,033 - +1.1 2,212,033 - +0.5 2,212,061 + +0.5 2,212,061 + +0.2 2,212,061 + -0.5 2,212,061 + +1.8 2,212,062 - +0.2 2,212,062 - +0.1 2,212,079 + +0.3
Or see this region's nucleotide sequence