Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_08305 and AO356_08310 are separated by 3 nucleotides AO356_08310 and AO356_08315 are separated by 221 nucleotides AO356_08315 and AO356_08320 are separated by 46 nucleotides AO356_08320 and AO356_08325 are separated by 57 nucleotides
AO356_08305: AO356_08305 - addiction module protein, at 1,868,866 to 1,869,168
_08305
AO356_08310: AO356_08310 - addiction module antitoxin, at 1,869,172 to 1,869,462
_08310
AO356_08315: AO356_08315 - hypothetical protein, at 1,869,684 to 1,870,082
_08315
AO356_08320: AO356_08320 - copper resistance protein CopZ, at 1,870,129 to 1,870,608
_08320
AO356_08325: AO356_08325 - predicted copper homeostasis protein (from data) , at 1,870,666 to 1,871,070
_08325
Position (kb)
1869
1870
1871 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1868.749 kb on + strand at 1868.749 kb on + strand at 1868.749 kb on + strand at 1868.750 kb on - strand at 1868.750 kb on - strand at 1868.750 kb on - strand at 1868.751 kb on + strand at 1868.751 kb on + strand at 1868.751 kb on + strand at 1868.751 kb on + strand at 1868.752 kb on - strand at 1868.752 kb on - strand at 1868.764 kb on + strand at 1868.764 kb on + strand at 1868.765 kb on - strand at 1868.768 kb on - strand at 1868.841 kb on - strand at 1868.845 kb on - strand at 1868.892 kb on - strand at 1868.892 kb on - strand at 1869.010 kb on + strand, within AO356_08305 at 1869.010 kb on + strand, within AO356_08305 at 1869.010 kb on + strand, within AO356_08305 at 1869.010 kb on + strand, within AO356_08305 at 1869.010 kb on + strand, within AO356_08305 at 1869.011 kb on - strand, within AO356_08305 at 1869.011 kb on - strand, within AO356_08305 at 1869.011 kb on - strand, within AO356_08305 at 1869.011 kb on - strand, within AO356_08305 at 1869.011 kb on - strand, within AO356_08305 at 1869.021 kb on + strand, within AO356_08305 at 1869.021 kb on + strand, within AO356_08305 at 1869.022 kb on - strand, within AO356_08305 at 1869.022 kb on - strand, within AO356_08305 at 1869.049 kb on + strand, within AO356_08305 at 1869.049 kb on + strand, within AO356_08305 at 1869.050 kb on - strand, within AO356_08305 at 1869.050 kb on - strand, within AO356_08305 at 1869.050 kb on - strand, within AO356_08305 at 1869.050 kb on - strand, within AO356_08305 at 1869.050 kb on - strand, within AO356_08305 at 1869.050 kb on - strand, within AO356_08305 at 1869.050 kb on - strand, within AO356_08305 at 1869.076 kb on + strand, within AO356_08305 at 1869.076 kb on + strand, within AO356_08305 at 1869.076 kb on + strand, within AO356_08305 at 1869.077 kb on - strand, within AO356_08305 at 1869.208 kb on + strand, within AO356_08310 at 1869.208 kb on + strand, within AO356_08310 at 1869.238 kb on + strand, within AO356_08310 at 1869.298 kb on - strand, within AO356_08310 at 1869.367 kb on + strand, within AO356_08310 at 1869.367 kb on + strand, within AO356_08310 at 1869.384 kb on + strand, within AO356_08310 at 1869.384 kb on + strand, within AO356_08310 at 1869.408 kb on + strand, within AO356_08310 at 1869.408 kb on + strand, within AO356_08310 at 1869.408 kb on + strand, within AO356_08310 at 1869.408 kb on + strand, within AO356_08310 at 1869.409 kb on - strand, within AO356_08310 at 1869.409 kb on - strand, within AO356_08310 at 1869.409 kb on - strand, within AO356_08310 at 1869.409 kb on - strand, within AO356_08310 at 1869.409 kb on - strand, within AO356_08310 at 1869.409 kb on - strand, within AO356_08310 at 1869.443 kb on + strand at 1869.444 kb on - strand at 1869.444 kb on - strand at 1869.484 kb on + strand at 1869.485 kb on - strand at 1869.485 kb on - strand at 1869.485 kb on - strand at 1869.485 kb on - strand at 1869.575 kb on + strand at 1869.575 kb on + strand at 1869.576 kb on - strand at 1869.576 kb on - strand at 1869.601 kb on + strand at 1869.601 kb on + strand at 1869.602 kb on - strand at 1869.622 kb on - strand at 1869.643 kb on + strand at 1869.643 kb on + strand at 1869.647 kb on + strand at 1869.647 kb on + strand at 1869.972 kb on + strand, within AO356_08315 at 1869.972 kb on + strand, within AO356_08315 at 1870.094 kb on + strand at 1870.094 kb on + strand at 1870.095 kb on - strand at 1870.143 kb on + strand at 1870.143 kb on + strand at 1870.144 kb on - strand at 1870.144 kb on - strand at 1870.195 kb on + strand, within AO356_08320 at 1870.195 kb on + strand, within AO356_08320 at 1870.195 kb on + strand, within AO356_08320 at 1870.196 kb on - strand, within AO356_08320 at 1870.196 kb on - strand, within AO356_08320 at 1870.196 kb on - strand, within AO356_08320 at 1870.196 kb on - strand, within AO356_08320 at 1870.196 kb on - strand, within AO356_08320 at 1870.270 kb on + strand, within AO356_08320 at 1870.271 kb on - strand, within AO356_08320 at 1870.271 kb on - strand, within AO356_08320 at 1870.447 kb on + strand, within AO356_08320 at 1870.606 kb on + strand at 1870.612 kb on + strand at 1870.984 kb on + strand, within AO356_08325 at 1870.985 kb on - strand, within AO356_08325 at 1870.985 kb on - strand, within AO356_08325 at 1870.985 kb on - strand, within AO356_08325 at 1870.985 kb on - strand, within AO356_08325
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 1,868,749 + +0.8 1,868,749 + -0.9 1,868,749 + +0.2 1,868,750 - -0.9 1,868,750 - +2.2 1,868,750 - +0.8 1,868,751 + +0.3 1,868,751 + +0.2 1,868,751 + -0.7 1,868,751 + +0.7 1,868,752 - -0.5 1,868,752 - -1.0 1,868,764 + +0.3 1,868,764 + +0.5 1,868,765 - +0.7 1,868,768 - +0.1 1,868,841 - +0.7 1,868,845 - +1.0 1,868,892 - -0.3 1,868,892 - +0.8 1,869,010 + AO356_08305 0.48 +0.6 1,869,010 + AO356_08305 0.48 +0.6 1,869,010 + AO356_08305 0.48 +1.1 1,869,010 + AO356_08305 0.48 +1.8 1,869,010 + AO356_08305 0.48 -0.0 1,869,011 - AO356_08305 0.48 +0.1 1,869,011 - AO356_08305 0.48 +0.3 1,869,011 - AO356_08305 0.48 -0.1 1,869,011 - AO356_08305 0.48 +0.0 1,869,011 - AO356_08305 0.48 +0.3 1,869,021 + AO356_08305 0.51 -0.2 1,869,021 + AO356_08305 0.51 +0.2 1,869,022 - AO356_08305 0.51 +0.6 1,869,022 - AO356_08305 0.51 -0.6 1,869,049 + AO356_08305 0.60 +0.3 1,869,049 + AO356_08305 0.60 -0.3 1,869,050 - AO356_08305 0.61 -0.5 1,869,050 - AO356_08305 0.61 +2.1 1,869,050 - AO356_08305 0.61 +0.3 1,869,050 - AO356_08305 0.61 +0.8 1,869,050 - AO356_08305 0.61 -0.3 1,869,050 - AO356_08305 0.61 +0.7 1,869,050 - AO356_08305 0.61 +1.3 1,869,076 + AO356_08305 0.69 -1.1 1,869,076 + AO356_08305 0.69 -0.5 1,869,076 + AO356_08305 0.69 -0.2 1,869,077 - AO356_08305 0.70 +0.8 1,869,208 + AO356_08310 0.12 +0.3 1,869,208 + AO356_08310 0.12 -0.8 1,869,238 + AO356_08310 0.23 +0.5 1,869,298 - AO356_08310 0.43 -1.0 1,869,367 + AO356_08310 0.67 -1.2 1,869,367 + AO356_08310 0.67 -0.5 1,869,384 + AO356_08310 0.73 +0.7 1,869,384 + AO356_08310 0.73 -0.5 1,869,408 + AO356_08310 0.81 +1.2 1,869,408 + AO356_08310 0.81 -0.5 1,869,408 + AO356_08310 0.81 -0.7 1,869,408 + AO356_08310 0.81 +0.3 1,869,409 - AO356_08310 0.81 +0.7 1,869,409 - AO356_08310 0.81 +1.5 1,869,409 - AO356_08310 0.81 -0.1 1,869,409 - AO356_08310 0.81 -1.4 1,869,409 - AO356_08310 0.81 +0.7 1,869,409 - AO356_08310 0.81 +0.6 1,869,443 + +0.3 1,869,444 - +0.3 1,869,444 - +1.0 1,869,484 + +0.3 1,869,485 - -0.6 1,869,485 - +0.5 1,869,485 - +0.4 1,869,485 - +0.3 1,869,575 + -0.0 1,869,575 + -1.0 1,869,576 - +1.0 1,869,576 - -0.2 1,869,601 + -1.2 1,869,601 + -0.0 1,869,602 - +0.2 1,869,622 - +0.7 1,869,643 + +0.2 1,869,643 + +0.4 1,869,647 + -0.2 1,869,647 + +0.4 1,869,972 + AO356_08315 0.72 +0.3 1,869,972 + AO356_08315 0.72 -0.2 1,870,094 + +0.1 1,870,094 + -0.5 1,870,095 - +1.1 1,870,143 + +0.9 1,870,143 + +1.2 1,870,144 - +1.3 1,870,144 - +2.9 1,870,195 + AO356_08320 0.14 -0.3 1,870,195 + AO356_08320 0.14 +0.6 1,870,195 + AO356_08320 0.14 +0.5 1,870,196 - AO356_08320 0.14 +1.2 1,870,196 - AO356_08320 0.14 -0.9 1,870,196 - AO356_08320 0.14 +2.5 1,870,196 - AO356_08320 0.14 -0.5 1,870,196 - AO356_08320 0.14 +0.5 1,870,270 + AO356_08320 0.29 +0.9 1,870,271 - AO356_08320 0.30 +1.2 1,870,271 - AO356_08320 0.30 +0.5 1,870,447 + AO356_08320 0.66 +0.6 1,870,606 + -0.4 1,870,612 + -0.4 1,870,984 + AO356_08325 0.79 +1.0 1,870,985 - AO356_08325 0.79 +1.7 1,870,985 - AO356_08325 0.79 +1.6 1,870,985 - AO356_08325 0.79 -0.3 1,870,985 - AO356_08325 0.79 +1.8
Or see this region's nucleotide sequence