Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04810 and AO356_04815 are separated by 1 nucleotides AO356_04815 and AO356_04820 are separated by 223 nucleotides AO356_04820 and AO356_04825 overlap by 4 nucleotides
AO356_04810: AO356_04810 - phospholipase, at 1,083,379 to 1,084,536
_04810
AO356_04815: AO356_04815 - hypothetical protein, at 1,084,538 to 1,085,128
_04815
AO356_04820: AO356_04820 - amidase, at 1,085,352 to 1,085,663
_04820
AO356_04825: AO356_04825 - serine hydrolase, at 1,085,660 to 1,086,754
_04825
Position (kb)
1084
1085
1086 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1083.669 kb on - strand, within AO356_04810 at 1083.669 kb on - strand, within AO356_04810 at 1083.836 kb on + strand, within AO356_04810 at 1083.837 kb on - strand, within AO356_04810 at 1083.927 kb on - strand, within AO356_04810 at 1083.927 kb on - strand, within AO356_04810 at 1084.244 kb on + strand, within AO356_04810 at 1084.245 kb on - strand, within AO356_04810 at 1084.313 kb on + strand, within AO356_04810 at 1084.314 kb on - strand, within AO356_04810 at 1084.314 kb on - strand, within AO356_04810 at 1084.409 kb on + strand, within AO356_04810 at 1084.410 kb on - strand, within AO356_04810 at 1084.410 kb on - strand, within AO356_04810 at 1084.728 kb on + strand, within AO356_04815 at 1084.729 kb on - strand, within AO356_04815 at 1085.050 kb on - strand, within AO356_04815 at 1085.128 kb on + strand at 1085.128 kb on + strand at 1085.128 kb on + strand at 1085.129 kb on - strand at 1085.129 kb on - strand at 1085.129 kb on - strand at 1085.129 kb on - strand at 1085.129 kb on - strand at 1085.129 kb on - strand at 1085.129 kb on - strand at 1085.147 kb on + strand at 1085.147 kb on + strand at 1085.148 kb on - strand at 1085.148 kb on - strand at 1085.218 kb on - strand at 1085.243 kb on + strand at 1085.244 kb on - strand at 1085.244 kb on - strand at 1085.244 kb on - strand at 1085.244 kb on - strand at 1085.244 kb on - strand at 1085.316 kb on + strand at 1085.316 kb on + strand at 1085.316 kb on + strand at 1085.317 kb on - strand at 1085.348 kb on + strand at 1085.348 kb on + strand at 1085.349 kb on - strand at 1085.497 kb on + strand, within AO356_04820 at 1085.497 kb on + strand, within AO356_04820 at 1085.497 kb on + strand, within AO356_04820 at 1085.498 kb on - strand, within AO356_04820 at 1085.498 kb on - strand, within AO356_04820 at 1085.521 kb on + strand, within AO356_04820 at 1085.522 kb on - strand, within AO356_04820 at 1085.522 kb on - strand, within AO356_04820 at 1085.536 kb on + strand, within AO356_04820 at 1085.536 kb on + strand, within AO356_04820 at 1085.536 kb on + strand, within AO356_04820 at 1085.537 kb on - strand, within AO356_04820 at 1085.537 kb on - strand, within AO356_04820 at 1085.551 kb on + strand, within AO356_04820 at 1085.551 kb on + strand, within AO356_04820 at 1085.551 kb on + strand, within AO356_04820 at 1085.551 kb on + strand, within AO356_04820 at 1085.625 kb on + strand, within AO356_04820 at 1085.722 kb on - strand at 1085.781 kb on + strand, within AO356_04825 at 1085.781 kb on + strand, within AO356_04825 at 1085.781 kb on + strand, within AO356_04825 at 1085.782 kb on - strand, within AO356_04825 at 1085.782 kb on - strand, within AO356_04825 at 1085.818 kb on + strand, within AO356_04825 at 1086.036 kb on + strand, within AO356_04825 at 1086.042 kb on + strand, within AO356_04825 at 1086.042 kb on + strand, within AO356_04825 at 1086.043 kb on - strand, within AO356_04825 at 1086.043 kb on - strand, within AO356_04825 at 1086.043 kb on - strand, within AO356_04825 at 1086.043 kb on - strand, within AO356_04825
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 1,083,669 - AO356_04810 0.25 +0.6 1,083,669 - AO356_04810 0.25 +0.3 1,083,836 + AO356_04810 0.39 -0.9 1,083,837 - AO356_04810 0.40 -0.2 1,083,927 - AO356_04810 0.47 +0.5 1,083,927 - AO356_04810 0.47 -0.2 1,084,244 + AO356_04810 0.75 +0.7 1,084,245 - AO356_04810 0.75 +0.1 1,084,313 + AO356_04810 0.81 +0.2 1,084,314 - AO356_04810 0.81 -0.4 1,084,314 - AO356_04810 0.81 -1.4 1,084,409 + AO356_04810 0.89 +0.9 1,084,410 - AO356_04810 0.89 +0.1 1,084,410 - AO356_04810 0.89 +0.3 1,084,728 + AO356_04815 0.32 -0.6 1,084,729 - AO356_04815 0.32 +0.0 1,085,050 - AO356_04815 0.87 -2.8 1,085,128 + -0.0 1,085,128 + +1.0 1,085,128 + -0.6 1,085,129 - -0.0 1,085,129 - -0.7 1,085,129 - -1.5 1,085,129 - -0.0 1,085,129 - +1.0 1,085,129 - -0.4 1,085,129 - +1.5 1,085,147 + -0.3 1,085,147 + -0.6 1,085,148 - +0.3 1,085,148 - -0.5 1,085,218 - +0.8 1,085,243 + -1.5 1,085,244 - -2.1 1,085,244 - -1.5 1,085,244 - -0.4 1,085,244 - +0.8 1,085,244 - -0.4 1,085,316 + +0.0 1,085,316 + +1.2 1,085,316 + +0.7 1,085,317 - +0.2 1,085,348 + +1.2 1,085,348 + -0.0 1,085,349 - +0.4 1,085,497 + AO356_04820 0.46 -0.5 1,085,497 + AO356_04820 0.46 +1.0 1,085,497 + AO356_04820 0.46 +0.2 1,085,498 - AO356_04820 0.47 -0.3 1,085,498 - AO356_04820 0.47 -1.7 1,085,521 + AO356_04820 0.54 +0.8 1,085,522 - AO356_04820 0.54 -0.0 1,085,522 - AO356_04820 0.54 -0.2 1,085,536 + AO356_04820 0.59 +1.2 1,085,536 + AO356_04820 0.59 +0.1 1,085,536 + AO356_04820 0.59 -0.3 1,085,537 - AO356_04820 0.59 -0.1 1,085,537 - AO356_04820 0.59 +0.8 1,085,551 + AO356_04820 0.64 -1.9 1,085,551 + AO356_04820 0.64 -1.4 1,085,551 + AO356_04820 0.64 -1.7 1,085,551 + AO356_04820 0.64 -0.5 1,085,625 + AO356_04820 0.88 -0.6 1,085,722 - +0.6 1,085,781 + AO356_04825 0.11 +0.3 1,085,781 + AO356_04825 0.11 -0.9 1,085,781 + AO356_04825 0.11 -0.1 1,085,782 - AO356_04825 0.11 -0.0 1,085,782 - AO356_04825 0.11 -0.7 1,085,818 + AO356_04825 0.14 -0.8 1,086,036 + AO356_04825 0.34 +0.7 1,086,042 + AO356_04825 0.35 -0.3 1,086,042 + AO356_04825 0.35 +1.0 1,086,043 - AO356_04825 0.35 -0.3 1,086,043 - AO356_04825 0.35 +0.2 1,086,043 - AO356_04825 0.35 -0.2 1,086,043 - AO356_04825 0.35 -0.9
Or see this region's nucleotide sequence