Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_00335 and AO356_00340 are separated by 222 nucleotides AO356_00340 and AO356_00345 are separated by 63 nucleotides AO356_00345 and AO356_00350 are separated by 32 nucleotides
AO356_00335: AO356_00335 - integrase, at 65,556 to 67,397
_00335
AO356_00340: AO356_00340 - tRNA-Gly, at 67,620 to 67,695
_00340
AO356_00345: AO356_00345 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 67,759 to 68,319
_00345
AO356_00350: AO356_00350 - excinuclease ABC subunit C, at 68,352 to 70,175
_00350
Position (kb) 65
66
67
68 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 64.589 kb on + strand at 64.590 kb on - strand at 64.590 kb on - strand at 64.597 kb on - strand at 64.711 kb on + strand at 64.711 kb on + strand at 64.712 kb on - strand at 64.712 kb on - strand at 64.712 kb on - strand at 64.740 kb on + strand at 64.741 kb on - strand at 64.755 kb on + strand at 64.755 kb on + strand at 64.756 kb on - strand at 64.756 kb on - strand at 64.816 kb on - strand at 64.816 kb on - strand at 64.830 kb on + strand at 64.830 kb on + strand at 64.830 kb on + strand at 64.830 kb on + strand at 64.830 kb on + strand at 64.830 kb on + strand at 64.830 kb on + strand at 64.830 kb on + strand at 64.831 kb on - strand at 64.831 kb on - strand at 64.831 kb on - strand at 64.831 kb on - strand at 64.836 kb on + strand at 64.837 kb on - strand at 64.837 kb on - strand at 64.837 kb on - strand at 64.843 kb on + strand at 64.844 kb on - strand at 64.844 kb on - strand at 64.949 kb on - strand at 64.989 kb on + strand at 64.989 kb on + strand at 64.989 kb on + strand at 65.008 kb on + strand at 65.009 kb on - strand at 65.023 kb on - strand at 65.048 kb on + strand at 65.048 kb on + strand at 65.048 kb on + strand at 65.049 kb on - strand at 65.049 kb on - strand at 65.137 kb on + strand at 65.150 kb on - strand at 65.243 kb on - strand at 65.266 kb on + strand at 65.384 kb on + strand at 65.405 kb on + strand at 65.433 kb on + strand at 65.434 kb on - strand at 65.478 kb on + strand at 65.479 kb on - strand at 65.503 kb on + strand at 65.503 kb on + strand at 65.504 kb on - strand at 65.568 kb on + strand at 65.569 kb on - strand at 65.569 kb on - strand at 65.596 kb on - strand at 65.613 kb on - strand at 65.615 kb on + strand at 65.615 kb on + strand at 65.615 kb on + strand at 65.616 kb on - strand at 65.616 kb on - strand at 65.644 kb on - strand at 65.660 kb on + strand at 65.661 kb on - strand at 65.721 kb on + strand at 65.721 kb on + strand at 65.722 kb on - strand at 65.722 kb on - strand at 65.890 kb on + strand, within AO356_00335 at 65.890 kb on + strand, within AO356_00335 at 65.890 kb on + strand, within AO356_00335 at 65.891 kb on - strand, within AO356_00335 at 65.891 kb on - strand, within AO356_00335 at 65.922 kb on + strand, within AO356_00335 at 65.922 kb on + strand, within AO356_00335 at 65.922 kb on + strand, within AO356_00335 at 65.922 kb on + strand, within AO356_00335 at 65.922 kb on + strand, within AO356_00335 at 65.922 kb on + strand, within AO356_00335 at 65.922 kb on + strand, within AO356_00335 at 65.923 kb on - strand, within AO356_00335 at 65.923 kb on - strand, within AO356_00335 at 65.923 kb on - strand, within AO356_00335 at 65.923 kb on - strand, within AO356_00335 at 65.923 kb on - strand, within AO356_00335 at 65.923 kb on - strand, within AO356_00335 at 65.923 kb on - strand, within AO356_00335 at 65.923 kb on - strand, within AO356_00335 at 65.923 kb on - strand, within AO356_00335 at 65.974 kb on - strand, within AO356_00335 at 65.974 kb on - strand, within AO356_00335 at 66.067 kb on + strand, within AO356_00335 at 66.067 kb on + strand, within AO356_00335 at 66.068 kb on - strand, within AO356_00335 at 66.068 kb on - strand, within AO356_00335 at 66.068 kb on - strand, within AO356_00335 at 66.106 kb on - strand, within AO356_00335 at 66.157 kb on - strand, within AO356_00335 at 66.174 kb on + strand, within AO356_00335 at 66.174 kb on + strand, within AO356_00335 at 66.175 kb on - strand, within AO356_00335 at 66.227 kb on - strand, within AO356_00335 at 66.227 kb on - strand, within AO356_00335 at 66.241 kb on + strand, within AO356_00335 at 66.241 kb on + strand, within AO356_00335 at 66.384 kb on + strand, within AO356_00335 at 66.448 kb on + strand, within AO356_00335 at 66.448 kb on + strand, within AO356_00335 at 66.448 kb on + strand, within AO356_00335 at 66.448 kb on + strand, within AO356_00335 at 66.449 kb on - strand, within AO356_00335 at 66.449 kb on - strand, within AO356_00335 at 66.449 kb on - strand, within AO356_00335 at 66.523 kb on + strand, within AO356_00335 at 66.523 kb on + strand, within AO356_00335 at 66.523 kb on + strand, within AO356_00335 at 66.523 kb on + strand, within AO356_00335 at 66.523 kb on + strand, within AO356_00335 at 66.524 kb on - strand, within AO356_00335 at 66.524 kb on - strand, within AO356_00335 at 66.524 kb on - strand, within AO356_00335 at 66.568 kb on - strand, within AO356_00335 at 66.568 kb on - strand, within AO356_00335 at 66.719 kb on - strand, within AO356_00335 at 66.936 kb on + strand, within AO356_00335 at 66.936 kb on + strand, within AO356_00335 at 66.942 kb on + strand, within AO356_00335 at 66.943 kb on - strand, within AO356_00335 at 66.967 kb on + strand, within AO356_00335 at 66.967 kb on + strand, within AO356_00335 at 66.967 kb on + strand, within AO356_00335 at 66.967 kb on + strand, within AO356_00335 at 66.968 kb on - strand, within AO356_00335 at 66.971 kb on + strand, within AO356_00335 at 66.971 kb on + strand, within AO356_00335 at 66.971 kb on + strand, within AO356_00335 at 66.972 kb on - strand, within AO356_00335 at 66.972 kb on - strand, within AO356_00335 at 67.153 kb on + strand, within AO356_00335 at 67.153 kb on + strand, within AO356_00335 at 67.153 kb on + strand, within AO356_00335 at 67.181 kb on + strand, within AO356_00335 at 67.182 kb on - strand, within AO356_00335 at 67.231 kb on + strand at 67.231 kb on + strand at 67.274 kb on - strand at 67.345 kb on + strand at 67.345 kb on + strand at 67.346 kb on - strand at 67.506 kb on + strand at 67.507 kb on - strand at 67.519 kb on + strand at 67.564 kb on - strand at 67.717 kb on + strand at 67.718 kb on - strand at 68.354 kb on - strand at 68.375 kb on - strand at 68.375 kb on - strand at 68.375 kb on - strand at 68.397 kb on - strand at 68.397 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 64,589 + +1.0 64,590 - -0.9 64,590 - +1.1 64,597 - +0.9 64,711 + +0.9 64,711 + +0.9 64,712 - -0.3 64,712 - -0.6 64,712 - -0.1 64,740 + +1.2 64,741 - -0.6 64,755 + +1.1 64,755 + -0.2 64,756 - -1.3 64,756 - -0.5 64,816 - +0.1 64,816 - -0.4 64,830 + +0.6 64,830 + -2.2 64,830 + +1.0 64,830 + -0.7 64,830 + +0.4 64,830 + +0.1 64,830 + +1.3 64,830 + +0.3 64,831 - +0.1 64,831 - +0.8 64,831 - -0.4 64,831 - -1.2 64,836 + +0.0 64,837 - -0.6 64,837 - -0.8 64,837 - -0.4 64,843 + -0.1 64,844 - +0.5 64,844 - -1.7 64,949 - -0.3 64,989 + +0.1 64,989 + +0.1 64,989 + +1.0 65,008 + +0.3 65,009 - -0.8 65,023 - -0.7 65,048 + +0.1 65,048 + -0.4 65,048 + -0.6 65,049 - -1.1 65,049 - -0.2 65,137 + -0.8 65,150 - +0.1 65,243 - -0.5 65,266 + -0.4 65,384 + +1.0 65,405 + +0.4 65,433 + +0.0 65,434 - -0.4 65,478 + -0.1 65,479 - +0.8 65,503 + +0.9 65,503 + +0.9 65,504 - +0.2 65,568 + -1.4 65,569 - -0.1 65,569 - -0.1 65,596 - -0.4 65,613 - -0.3 65,615 + +0.4 65,615 + -0.8 65,615 + +0.6 65,616 - +1.6 65,616 - -1.2 65,644 - +0.0 65,660 + +0.7 65,661 - +0.1 65,721 + -0.3 65,721 + +0.0 65,722 - +0.7 65,722 - +0.2 65,890 + AO356_00335 0.18 +0.3 65,890 + AO356_00335 0.18 -1.0 65,890 + AO356_00335 0.18 +0.9 65,891 - AO356_00335 0.18 -0.2 65,891 - AO356_00335 0.18 +0.3 65,922 + AO356_00335 0.20 -0.5 65,922 + AO356_00335 0.20 +0.1 65,922 + AO356_00335 0.20 -0.1 65,922 + AO356_00335 0.20 +0.6 65,922 + AO356_00335 0.20 -0.2 65,922 + AO356_00335 0.20 -0.9 65,922 + AO356_00335 0.20 -0.2 65,923 - AO356_00335 0.20 +0.5 65,923 - AO356_00335 0.20 -0.1 65,923 - AO356_00335 0.20 +1.0 65,923 - AO356_00335 0.20 +0.3 65,923 - AO356_00335 0.20 -2.3 65,923 - AO356_00335 0.20 -0.0 65,923 - AO356_00335 0.20 -0.1 65,923 - AO356_00335 0.20 -0.5 65,923 - AO356_00335 0.20 +0.1 65,974 - AO356_00335 0.23 +0.1 65,974 - AO356_00335 0.23 +0.6 66,067 + AO356_00335 0.28 -1.0 66,067 + AO356_00335 0.28 +0.9 66,068 - AO356_00335 0.28 +1.2 66,068 - AO356_00335 0.28 -0.0 66,068 - AO356_00335 0.28 +0.9 66,106 - AO356_00335 0.30 +0.0 66,157 - AO356_00335 0.33 -1.0 66,174 + AO356_00335 0.34 +0.6 66,174 + AO356_00335 0.34 -1.5 66,175 - AO356_00335 0.34 +0.3 66,227 - AO356_00335 0.36 -0.2 66,227 - AO356_00335 0.36 -0.3 66,241 + AO356_00335 0.37 +0.2 66,241 + AO356_00335 0.37 -1.0 66,384 + AO356_00335 0.45 +1.0 66,448 + AO356_00335 0.48 +0.5 66,448 + AO356_00335 0.48 -0.7 66,448 + AO356_00335 0.48 -0.8 66,448 + AO356_00335 0.48 +1.1 66,449 - AO356_00335 0.48 +1.4 66,449 - AO356_00335 0.48 +0.8 66,449 - AO356_00335 0.48 +0.7 66,523 + AO356_00335 0.52 +0.9 66,523 + AO356_00335 0.52 +0.9 66,523 + AO356_00335 0.52 -0.1 66,523 + AO356_00335 0.52 +0.1 66,523 + AO356_00335 0.52 +0.4 66,524 - AO356_00335 0.53 -0.3 66,524 - AO356_00335 0.53 +0.4 66,524 - AO356_00335 0.53 +0.3 66,568 - AO356_00335 0.55 +1.0 66,568 - AO356_00335 0.55 +1.5 66,719 - AO356_00335 0.63 -0.3 66,936 + AO356_00335 0.75 +0.1 66,936 + AO356_00335 0.75 +0.0 66,942 + AO356_00335 0.75 -0.2 66,943 - AO356_00335 0.75 -0.2 66,967 + AO356_00335 0.77 +0.3 66,967 + AO356_00335 0.77 +0.8 66,967 + AO356_00335 0.77 -0.3 66,967 + AO356_00335 0.77 +0.6 66,968 - AO356_00335 0.77 -0.3 66,971 + AO356_00335 0.77 +0.1 66,971 + AO356_00335 0.77 -0.4 66,971 + AO356_00335 0.77 +0.9 66,972 - AO356_00335 0.77 +0.4 66,972 - AO356_00335 0.77 -0.8 67,153 + AO356_00335 0.87 -1.2 67,153 + AO356_00335 0.87 -1.1 67,153 + AO356_00335 0.87 +0.5 67,181 + AO356_00335 0.88 +0.4 67,182 - AO356_00335 0.88 -1.2 67,231 + +0.3 67,231 + +1.1 67,274 - -0.1 67,345 + +0.8 67,345 + +0.6 67,346 - -0.4 67,506 + +1.0 67,507 - -1.1 67,519 + +0.2 67,564 - -0.5 67,717 + +0.1 67,718 - -0.6 68,354 - +0.6 68,375 - -3.2 68,375 - -2.6 68,375 - -2.1 68,397 - -3.6 68,397 - -1.7
Or see this region's nucleotide sequence