Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5015 and Pf6N2E2_5016 are separated by 40 nucleotides Pf6N2E2_5016 and Pf6N2E2_5017 overlap by 8 nucleotides Pf6N2E2_5017 and Pf6N2E2_5018 are separated by 215 nucleotides
Pf6N2E2_5015 - Magnesium and cobalt efflux protein CorC, at 5,782,132 to 5,782,971
_5015
Pf6N2E2_5016 - Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly, at 5,783,012 to 5,783,470
_5016
Pf6N2E2_5017 - Phosphate starvation-inducible protein PhoH, predicted ATPase, at 5,783,463 to 5,784,473
_5017
Pf6N2E2_5018 - tRNA-i(6)A37 methylthiotransferase, at 5,784,689 to 5,786,053
_5018
Position (kb)
5783
5784
5785 Strain fitness (log2 ratio)
-1
0
1 at 5783.011 kb on - strand at 5783.011 kb on - strand at 5783.011 kb on - strand at 5783.011 kb on - strand at 5783.011 kb on - strand at 5783.011 kb on - strand at 5783.011 kb on - strand at 5783.011 kb on - strand at 5783.807 kb on - strand, within Pf6N2E2_5017 at 5783.807 kb on - strand, within Pf6N2E2_5017 at 5783.807 kb on - strand, within Pf6N2E2_5017 at 5783.807 kb on - strand, within Pf6N2E2_5017 at 5783.807 kb on - strand, within Pf6N2E2_5017 at 5783.891 kb on - strand, within Pf6N2E2_5017 at 5783.906 kb on - strand, within Pf6N2E2_5017 at 5783.906 kb on - strand, within Pf6N2E2_5017 at 5784.041 kb on - strand, within Pf6N2E2_5017 at 5784.041 kb on - strand, within Pf6N2E2_5017 at 5784.041 kb on - strand, within Pf6N2E2_5017 at 5784.107 kb on - strand, within Pf6N2E2_5017 at 5784.107 kb on - strand, within Pf6N2E2_5017 at 5784.107 kb on - strand, within Pf6N2E2_5017 at 5784.502 kb on - strand at 5784.528 kb on - strand at 5784.548 kb on + strand at 5784.548 kb on + strand at 5784.634 kb on + strand at 5784.635 kb on - strand at 5784.635 kb on - strand at 5785.005 kb on + strand, within Pf6N2E2_5018 at 5785.005 kb on + strand, within Pf6N2E2_5018 at 5785.006 kb on - strand, within Pf6N2E2_5018 at 5785.006 kb on - strand, within Pf6N2E2_5018 at 5785.017 kb on + strand, within Pf6N2E2_5018 at 5785.017 kb on + strand, within Pf6N2E2_5018 at 5785.018 kb on - strand, within Pf6N2E2_5018 at 5785.018 kb on - strand, within Pf6N2E2_5018 at 5785.018 kb on - strand, within Pf6N2E2_5018 at 5785.100 kb on - strand, within Pf6N2E2_5018 at 5785.100 kb on - strand, within Pf6N2E2_5018 at 5785.161 kb on + strand, within Pf6N2E2_5018
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 5,783,011 - +0.1 5,783,011 - -0.2 5,783,011 - +1.4 5,783,011 - +0.5 5,783,011 - +0.5 5,783,011 - +1.1 5,783,011 - -0.8 5,783,011 - +0.1 5,783,807 - Pf6N2E2_5017 0.34 -0.2 5,783,807 - Pf6N2E2_5017 0.34 -0.3 5,783,807 - Pf6N2E2_5017 0.34 -0.6 5,783,807 - Pf6N2E2_5017 0.34 -0.3 5,783,807 - Pf6N2E2_5017 0.34 -0.9 5,783,891 - Pf6N2E2_5017 0.42 -0.4 5,783,906 - Pf6N2E2_5017 0.44 -0.3 5,783,906 - Pf6N2E2_5017 0.44 -1.4 5,784,041 - Pf6N2E2_5017 0.57 -0.2 5,784,041 - Pf6N2E2_5017 0.57 +0.5 5,784,041 - Pf6N2E2_5017 0.57 -0.9 5,784,107 - Pf6N2E2_5017 0.64 -0.6 5,784,107 - Pf6N2E2_5017 0.64 -0.1 5,784,107 - Pf6N2E2_5017 0.64 -0.2 5,784,502 - -0.1 5,784,528 - -1.3 5,784,548 + +0.2 5,784,548 + -0.2 5,784,634 + -0.9 5,784,635 - -1.5 5,784,635 - -0.3 5,785,005 + Pf6N2E2_5018 0.23 -0.2 5,785,005 + Pf6N2E2_5018 0.23 +0.7 5,785,006 - Pf6N2E2_5018 0.23 -0.4 5,785,006 - Pf6N2E2_5018 0.23 +0.2 5,785,017 + Pf6N2E2_5018 0.24 +0.6 5,785,017 + Pf6N2E2_5018 0.24 +0.6 5,785,018 - Pf6N2E2_5018 0.24 +0.4 5,785,018 - Pf6N2E2_5018 0.24 +0.5 5,785,018 - Pf6N2E2_5018 0.24 -0.1 5,785,100 - Pf6N2E2_5018 0.30 +0.5 5,785,100 - Pf6N2E2_5018 0.30 +0.7 5,785,161 + Pf6N2E2_5018 0.35 -0.6
Or see this region's nucleotide sequence