Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3900 and Pf6N2E2_3901 are separated by 236 nucleotides Pf6N2E2_3901 and Pf6N2E2_3902 are separated by 305 nucleotides Pf6N2E2_3902 and Pf6N2E2_3903 overlap by 4 nucleotides
Pf6N2E2_3900 - 33 kDa chaperonin (Heat shock protein 33) (HSP33), at 4,534,053 to 4,534,955
_3900
Pf6N2E2_3901 - Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog), at 4,535,192 to 4,535,596
_3901
Pf6N2E2_3902 - Ribosomal protein S6 glutaminyl transferase, at 4,535,902 to 4,536,315
_3902
Pf6N2E2_3903 - Ribosomal protein S6 glutaminyl transferase, at 4,536,312 to 4,537,217
_3903
Position (kb)
4535
4536 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4534.956 kb on - strand at 4534.966 kb on - strand at 4535.000 kb on - strand at 4535.000 kb on - strand at 4535.000 kb on - strand at 4535.338 kb on - strand, within Pf6N2E2_3901 at 4535.530 kb on - strand, within Pf6N2E2_3901 at 4535.620 kb on - strand at 4535.620 kb on - strand at 4535.620 kb on - strand at 4535.631 kb on + strand at 4535.631 kb on + strand at 4535.631 kb on + strand at 4535.631 kb on + strand at 4535.631 kb on + strand at 4535.632 kb on - strand at 4535.672 kb on + strand at 4535.673 kb on - strand at 4535.673 kb on - strand at 4535.673 kb on - strand at 4535.713 kb on - strand at 4535.743 kb on + strand at 4535.744 kb on - strand at 4535.747 kb on + strand at 4535.747 kb on + strand at 4535.747 kb on + strand at 4535.747 kb on + strand at 4535.748 kb on - strand at 4535.748 kb on - strand at 4535.748 kb on - strand at 4535.748 kb on - strand at 4535.748 kb on - strand at 4535.748 kb on - strand at 4535.748 kb on - strand at 4535.748 kb on - strand at 4535.768 kb on + strand at 4535.769 kb on - strand at 4535.769 kb on - strand at 4535.812 kb on + strand at 4535.812 kb on + strand at 4535.812 kb on + strand at 4535.813 kb on - strand at 4535.813 kb on - strand at 4535.832 kb on - strand at 4536.078 kb on - strand, within Pf6N2E2_3902 at 4536.109 kb on + strand, within Pf6N2E2_3902 at 4536.110 kb on - strand, within Pf6N2E2_3902 at 4536.256 kb on + strand, within Pf6N2E2_3902 at 4536.256 kb on + strand, within Pf6N2E2_3902 at 4536.256 kb on + strand, within Pf6N2E2_3902 at 4536.257 kb on - strand, within Pf6N2E2_3902 at 4536.257 kb on - strand, within Pf6N2E2_3902 at 4536.257 kb on - strand, within Pf6N2E2_3902 at 4536.257 kb on - strand, within Pf6N2E2_3902 at 4536.291 kb on + strand at 4536.291 kb on + strand at 4536.291 kb on + strand at 4536.348 kb on + strand at 4536.348 kb on + strand at 4536.348 kb on + strand at 4536.349 kb on - strand at 4536.423 kb on + strand, within Pf6N2E2_3903 at 4536.423 kb on + strand, within Pf6N2E2_3903 at 4536.525 kb on + strand, within Pf6N2E2_3903 at 4536.525 kb on + strand, within Pf6N2E2_3903 at 4536.525 kb on + strand, within Pf6N2E2_3903 at 4536.525 kb on + strand, within Pf6N2E2_3903 at 4536.525 kb on + strand, within Pf6N2E2_3903
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 4,534,956 - +0.2 4,534,966 - -0.3 4,535,000 - +0.6 4,535,000 - -0.2 4,535,000 - +0.0 4,535,338 - Pf6N2E2_3901 0.36 -0.1 4,535,530 - Pf6N2E2_3901 0.83 -0.8 4,535,620 - +0.4 4,535,620 - +0.6 4,535,620 - -0.5 4,535,631 + -1.1 4,535,631 + +0.4 4,535,631 + -2.1 4,535,631 + +0.5 4,535,631 + -0.5 4,535,632 - -0.3 4,535,672 + +0.5 4,535,673 - -0.1 4,535,673 - +1.0 4,535,673 - +0.5 4,535,713 - -0.4 4,535,743 + +0.5 4,535,744 - -0.8 4,535,747 + -0.2 4,535,747 + +0.2 4,535,747 + +0.4 4,535,747 + +0.1 4,535,748 - +0.8 4,535,748 - +0.9 4,535,748 - +0.3 4,535,748 - -0.1 4,535,748 - +0.5 4,535,748 - +0.3 4,535,748 - +1.5 4,535,748 - +1.0 4,535,768 + +0.0 4,535,769 - +1.8 4,535,769 - -0.2 4,535,812 + +0.7 4,535,812 + +0.0 4,535,812 + +0.5 4,535,813 - +0.1 4,535,813 - -0.6 4,535,832 - +0.0 4,536,078 - Pf6N2E2_3902 0.43 +0.2 4,536,109 + Pf6N2E2_3902 0.50 -1.1 4,536,110 - Pf6N2E2_3902 0.50 -0.1 4,536,256 + Pf6N2E2_3902 0.86 +0.4 4,536,256 + Pf6N2E2_3902 0.86 +0.2 4,536,256 + Pf6N2E2_3902 0.86 +0.2 4,536,257 - Pf6N2E2_3902 0.86 -0.1 4,536,257 - Pf6N2E2_3902 0.86 +0.5 4,536,257 - Pf6N2E2_3902 0.86 -0.1 4,536,257 - Pf6N2E2_3902 0.86 -0.3 4,536,291 + +0.2 4,536,291 + -0.2 4,536,291 + -0.7 4,536,348 + +0.6 4,536,348 + -0.8 4,536,348 + +0.5 4,536,349 - -0.0 4,536,423 + Pf6N2E2_3903 0.12 +0.5 4,536,423 + Pf6N2E2_3903 0.12 +0.1 4,536,525 + Pf6N2E2_3903 0.24 +0.2 4,536,525 + Pf6N2E2_3903 0.24 -0.3 4,536,525 + Pf6N2E2_3903 0.24 +0.1 4,536,525 + Pf6N2E2_3903 0.24 +0.2 4,536,525 + Pf6N2E2_3903 0.24 +0.3
Or see this region's nucleotide sequence