Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_329 and Pf6N2E2_330 are separated by 241 nucleotides Pf6N2E2_330 and Pf6N2E2_331 are separated by 265 nucleotides Pf6N2E2_331 and Pf6N2E2_332 are separated by 23 nucleotides
Pf6N2E2_329 - L-lactate permease, at 396,693 to 398,456
_329
Pf6N2E2_330 - Mesenchymal stem cell protein DSCD75, at 398,698 to 399,249
_330
Pf6N2E2_331 - Putative translation initiation inhibitor, yjgF family, at 399,515 to 399,946
_331
Pf6N2E2_332 - putative nucleoside-diphosphate-sugar epimerase, at 399,970 to 400,848
_332
Position (kb) 398
399
400 Strain fitness (log2 ratio) -1
0
1 at 397.729 kb on + strand, within Pf6N2E2_329 at 397.729 kb on + strand, within Pf6N2E2_329 at 397.730 kb on - strand, within Pf6N2E2_329 at 398.248 kb on + strand, within Pf6N2E2_329 at 398.249 kb on - strand, within Pf6N2E2_329 at 398.437 kb on + strand at 398.438 kb on - strand at 398.474 kb on + strand at 398.516 kb on + strand at 398.516 kb on + strand at 398.516 kb on + strand at 398.516 kb on + strand at 398.516 kb on + strand at 398.517 kb on - strand at 398.517 kb on - strand at 398.517 kb on - strand at 398.518 kb on + strand at 398.519 kb on - strand at 398.623 kb on + strand at 398.683 kb on + strand at 398.683 kb on + strand at 398.683 kb on + strand at 398.683 kb on + strand at 398.684 kb on - strand at 398.684 kb on - strand at 399.074 kb on + strand, within Pf6N2E2_330 at 399.074 kb on + strand, within Pf6N2E2_330 at 399.075 kb on - strand, within Pf6N2E2_330 at 399.107 kb on + strand, within Pf6N2E2_330 at 399.108 kb on - strand, within Pf6N2E2_330 at 399.108 kb on - strand, within Pf6N2E2_330 at 399.283 kb on + strand at 399.284 kb on - strand at 399.307 kb on - strand at 399.392 kb on + strand at 399.494 kb on - strand at 399.624 kb on + strand, within Pf6N2E2_331 at 399.624 kb on + strand, within Pf6N2E2_331 at 399.666 kb on + strand, within Pf6N2E2_331 at 399.666 kb on + strand, within Pf6N2E2_331 at 399.666 kb on + strand, within Pf6N2E2_331 at 399.938 kb on - strand at 400.016 kb on + strand at 400.016 kb on + strand at 400.016 kb on + strand at 400.016 kb on + strand at 400.016 kb on + strand at 400.017 kb on - strand at 400.017 kb on - strand at 400.017 kb on - strand at 400.017 kb on - strand at 400.017 kb on - strand at 400.075 kb on + strand, within Pf6N2E2_332 at 400.232 kb on + strand, within Pf6N2E2_332
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 397,729 + Pf6N2E2_329 0.59 +0.6 397,729 + Pf6N2E2_329 0.59 -0.0 397,730 - Pf6N2E2_329 0.59 -0.4 398,248 + Pf6N2E2_329 0.88 +0.1 398,249 - Pf6N2E2_329 0.88 -0.2 398,437 + -1.3 398,438 - +0.1 398,474 + +0.7 398,516 + +0.2 398,516 + -0.5 398,516 + -1.0 398,516 + -0.1 398,516 + -0.3 398,517 - -0.2 398,517 - +1.1 398,517 - +0.4 398,518 + -0.6 398,519 - +0.6 398,623 + +0.7 398,683 + +0.5 398,683 + -0.4 398,683 + -0.8 398,683 + +0.4 398,684 - +0.5 398,684 - -0.3 399,074 + Pf6N2E2_330 0.68 +0.4 399,074 + Pf6N2E2_330 0.68 -1.3 399,075 - Pf6N2E2_330 0.68 -0.2 399,107 + Pf6N2E2_330 0.74 -0.6 399,108 - Pf6N2E2_330 0.74 -1.0 399,108 - Pf6N2E2_330 0.74 -0.2 399,283 + +0.4 399,284 - -0.3 399,307 - -0.3 399,392 + +0.3 399,494 - +0.2 399,624 + Pf6N2E2_331 0.25 -0.2 399,624 + Pf6N2E2_331 0.25 +0.3 399,666 + Pf6N2E2_331 0.35 -0.4 399,666 + Pf6N2E2_331 0.35 +0.1 399,666 + Pf6N2E2_331 0.35 -1.1 399,938 - +0.6 400,016 + +0.4 400,016 + +1.0 400,016 + +1.5 400,016 + +1.2 400,016 + +0.0 400,017 - +0.6 400,017 - -0.6 400,017 - +0.2 400,017 - -1.2 400,017 - -0.3 400,075 + Pf6N2E2_332 0.12 +0.0 400,232 + Pf6N2E2_332 0.30 +0.7
Or see this region's nucleotide sequence