Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3005 and Pf6N2E2_3006 are separated by 3 nucleotides Pf6N2E2_3006 and Pf6N2E2_3007 overlap by 14 nucleotides
Pf6N2E2_3005 - FIG003269: Prophage tail protein, at 3,494,044 to 3,495,084
_3005
Pf6N2E2_3006 - Phage tail/DNA circulation protein, at 3,495,088 to 3,496,326
_3006
Pf6N2E2_3007 - Phage tail length tape-measure protein, at 3,496,313 to 3,497,887
_3007
Position (kb)
3495
3496
3497 Strain fitness (log2 ratio)
-1
0
1
2 at 3494.132 kb on + strand at 3494.132 kb on + strand at 3494.132 kb on + strand at 3494.191 kb on + strand, within Pf6N2E2_3005 at 3494.249 kb on + strand, within Pf6N2E2_3005 at 3494.474 kb on + strand, within Pf6N2E2_3005 at 3494.846 kb on + strand, within Pf6N2E2_3005 at 3494.846 kb on + strand, within Pf6N2E2_3005 at 3494.847 kb on - strand, within Pf6N2E2_3005 at 3494.847 kb on - strand, within Pf6N2E2_3005 at 3494.866 kb on + strand, within Pf6N2E2_3005 at 3494.866 kb on + strand, within Pf6N2E2_3005 at 3494.866 kb on + strand, within Pf6N2E2_3005 at 3494.866 kb on + strand, within Pf6N2E2_3005 at 3494.866 kb on + strand, within Pf6N2E2_3005 at 3494.866 kb on + strand, within Pf6N2E2_3005 at 3494.866 kb on + strand, within Pf6N2E2_3005 at 3494.866 kb on + strand, within Pf6N2E2_3005 at 3494.866 kb on + strand, within Pf6N2E2_3005 at 3494.866 kb on + strand, within Pf6N2E2_3005 at 3494.866 kb on + strand, within Pf6N2E2_3005 at 3494.866 kb on + strand, within Pf6N2E2_3005 at 3494.866 kb on + strand, within Pf6N2E2_3005 at 3494.866 kb on + strand, within Pf6N2E2_3005 at 3494.866 kb on + strand, within Pf6N2E2_3005 at 3494.866 kb on + strand, within Pf6N2E2_3005 at 3494.866 kb on + strand, within Pf6N2E2_3005 at 3494.866 kb on + strand, within Pf6N2E2_3005 at 3494.866 kb on + strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.867 kb on - strand, within Pf6N2E2_3005 at 3494.870 kb on + strand, within Pf6N2E2_3005 at 3494.871 kb on - strand, within Pf6N2E2_3005 at 3494.871 kb on - strand, within Pf6N2E2_3005 at 3494.871 kb on - strand, within Pf6N2E2_3005 at 3495.054 kb on + strand at 3495.054 kb on + strand at 3495.054 kb on + strand at 3495.055 kb on - strand at 3495.055 kb on - strand at 3495.090 kb on - strand at 3495.194 kb on + strand at 3495.195 kb on - strand at 3495.315 kb on - strand, within Pf6N2E2_3006 at 3495.529 kb on + strand, within Pf6N2E2_3006 at 3495.765 kb on - strand, within Pf6N2E2_3006 at 3495.807 kb on - strand, within Pf6N2E2_3006 at 3495.807 kb on - strand, within Pf6N2E2_3006 at 3495.980 kb on + strand, within Pf6N2E2_3006 at 3496.520 kb on - strand, within Pf6N2E2_3007 at 3496.520 kb on - strand, within Pf6N2E2_3007 at 3497.198 kb on - strand, within Pf6N2E2_3007
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 3,494,132 + +0.9 3,494,132 + -0.5 3,494,132 + +0.8 3,494,191 + Pf6N2E2_3005 0.14 +0.1 3,494,249 + Pf6N2E2_3005 0.20 -0.5 3,494,474 + Pf6N2E2_3005 0.41 -0.4 3,494,846 + Pf6N2E2_3005 0.77 +0.0 3,494,846 + Pf6N2E2_3005 0.77 -0.4 3,494,847 - Pf6N2E2_3005 0.77 +0.1 3,494,847 - Pf6N2E2_3005 0.77 -1.1 3,494,866 + Pf6N2E2_3005 0.79 -0.0 3,494,866 + Pf6N2E2_3005 0.79 +0.5 3,494,866 + Pf6N2E2_3005 0.79 +0.7 3,494,866 + Pf6N2E2_3005 0.79 +0.3 3,494,866 + Pf6N2E2_3005 0.79 +0.6 3,494,866 + Pf6N2E2_3005 0.79 +0.5 3,494,866 + Pf6N2E2_3005 0.79 -0.0 3,494,866 + Pf6N2E2_3005 0.79 +0.5 3,494,866 + Pf6N2E2_3005 0.79 +0.0 3,494,866 + Pf6N2E2_3005 0.79 +0.2 3,494,866 + Pf6N2E2_3005 0.79 +0.0 3,494,866 + Pf6N2E2_3005 0.79 +0.0 3,494,866 + Pf6N2E2_3005 0.79 +0.0 3,494,866 + Pf6N2E2_3005 0.79 -0.5 3,494,866 + Pf6N2E2_3005 0.79 +0.5 3,494,866 + Pf6N2E2_3005 0.79 -0.1 3,494,866 + Pf6N2E2_3005 0.79 +0.2 3,494,866 + Pf6N2E2_3005 0.79 -0.1 3,494,866 + Pf6N2E2_3005 0.79 -0.5 3,494,867 - Pf6N2E2_3005 0.79 -0.7 3,494,867 - Pf6N2E2_3005 0.79 +0.1 3,494,867 - Pf6N2E2_3005 0.79 +0.7 3,494,867 - Pf6N2E2_3005 0.79 +0.3 3,494,867 - Pf6N2E2_3005 0.79 +0.5 3,494,867 - Pf6N2E2_3005 0.79 -0.2 3,494,867 - Pf6N2E2_3005 0.79 -0.6 3,494,867 - Pf6N2E2_3005 0.79 +0.7 3,494,867 - Pf6N2E2_3005 0.79 -0.1 3,494,867 - Pf6N2E2_3005 0.79 +0.1 3,494,867 - Pf6N2E2_3005 0.79 -1.0 3,494,867 - Pf6N2E2_3005 0.79 +0.5 3,494,867 - Pf6N2E2_3005 0.79 +0.1 3,494,867 - Pf6N2E2_3005 0.79 -0.2 3,494,867 - Pf6N2E2_3005 0.79 -0.4 3,494,867 - Pf6N2E2_3005 0.79 +0.5 3,494,867 - Pf6N2E2_3005 0.79 -0.1 3,494,867 - Pf6N2E2_3005 0.79 +0.1 3,494,867 - Pf6N2E2_3005 0.79 +1.6 3,494,867 - Pf6N2E2_3005 0.79 +2.2 3,494,867 - Pf6N2E2_3005 0.79 +0.1 3,494,867 - Pf6N2E2_3005 0.79 +0.1 3,494,867 - Pf6N2E2_3005 0.79 -0.6 3,494,870 + Pf6N2E2_3005 0.79 -0.4 3,494,871 - Pf6N2E2_3005 0.79 -1.2 3,494,871 - Pf6N2E2_3005 0.79 +0.4 3,494,871 - Pf6N2E2_3005 0.79 +0.6 3,495,054 + -0.3 3,495,054 + +0.6 3,495,054 + +1.0 3,495,055 - +0.0 3,495,055 - +0.3 3,495,090 - +0.6 3,495,194 + +0.2 3,495,195 - -0.6 3,495,315 - Pf6N2E2_3006 0.18 -0.2 3,495,529 + Pf6N2E2_3006 0.36 -0.3 3,495,765 - Pf6N2E2_3006 0.55 -0.9 3,495,807 - Pf6N2E2_3006 0.58 -0.0 3,495,807 - Pf6N2E2_3006 0.58 -0.3 3,495,980 + Pf6N2E2_3006 0.72 -0.7 3,496,520 - Pf6N2E2_3007 0.13 -0.3 3,496,520 - Pf6N2E2_3007 0.13 +0.3 3,497,198 - Pf6N2E2_3007 0.56 -1.4
Or see this region's nucleotide sequence