Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1342 and Pf6N2E2_1343 are separated by 429 nucleotides Pf6N2E2_1343 and Pf6N2E2_1344 are separated by 121 nucleotides
Pf6N2E2_1342 - monooxygenase, putative, at 1,577,455 to 1,578,780
_1342
Pf6N2E2_1343 - Transcriptional regulator, at 1,579,210 to 1,580,124
_1343
Pf6N2E2_1344 - Pirin-related protein, at 1,580,246 to 1,581,085
_1344
Position (kb)
1579
1580
1581 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1578.512 kb on + strand, within Pf6N2E2_1342 at 1578.513 kb on - strand, within Pf6N2E2_1342 at 1578.800 kb on + strand at 1578.800 kb on + strand at 1578.800 kb on + strand at 1579.015 kb on + strand at 1579.072 kb on + strand at 1579.072 kb on + strand at 1579.111 kb on - strand at 1579.153 kb on + strand at 1579.153 kb on + strand at 1579.154 kb on - strand at 1579.341 kb on - strand, within Pf6N2E2_1343 at 1579.610 kb on + strand, within Pf6N2E2_1343 at 1579.610 kb on + strand, within Pf6N2E2_1343 at 1579.611 kb on - strand, within Pf6N2E2_1343 at 1579.668 kb on - strand, within Pf6N2E2_1343 at 1579.928 kb on + strand, within Pf6N2E2_1343 at 1579.928 kb on + strand, within Pf6N2E2_1343 at 1580.169 kb on + strand at 1580.199 kb on + strand at 1580.200 kb on - strand at 1580.200 kb on - strand at 1580.200 kb on - strand at 1580.453 kb on + strand, within Pf6N2E2_1344 at 1580.453 kb on + strand, within Pf6N2E2_1344 at 1580.453 kb on + strand, within Pf6N2E2_1344 at 1580.453 kb on + strand, within Pf6N2E2_1344 at 1580.453 kb on + strand, within Pf6N2E2_1344 at 1580.453 kb on + strand, within Pf6N2E2_1344 at 1580.454 kb on - strand, within Pf6N2E2_1344 at 1580.506 kb on - strand, within Pf6N2E2_1344 at 1580.550 kb on + strand, within Pf6N2E2_1344 at 1580.651 kb on + strand, within Pf6N2E2_1344 at 1580.709 kb on - strand, within Pf6N2E2_1344 at 1580.709 kb on - strand, within Pf6N2E2_1344 at 1580.753 kb on + strand, within Pf6N2E2_1344 at 1580.753 kb on + strand, within Pf6N2E2_1344 at 1580.753 kb on + strand, within Pf6N2E2_1344 at 1580.753 kb on + strand, within Pf6N2E2_1344 at 1580.754 kb on - strand, within Pf6N2E2_1344 at 1580.793 kb on - strand, within Pf6N2E2_1344 at 1580.794 kb on + strand, within Pf6N2E2_1344 at 1580.794 kb on + strand, within Pf6N2E2_1344 at 1580.795 kb on - strand, within Pf6N2E2_1344 at 1580.987 kb on + strand, within Pf6N2E2_1344 at 1580.987 kb on + strand, within Pf6N2E2_1344 at 1580.987 kb on + strand, within Pf6N2E2_1344 at 1580.991 kb on - strand, within Pf6N2E2_1344 at 1580.991 kb on - strand, within Pf6N2E2_1344 at 1581.107 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 1,578,512 + Pf6N2E2_1342 0.80 -0.1 1,578,513 - Pf6N2E2_1342 0.80 -0.8 1,578,800 + -0.5 1,578,800 + +0.4 1,578,800 + +0.7 1,579,015 + +0.1 1,579,072 + +0.3 1,579,072 + -0.8 1,579,111 - +0.5 1,579,153 + +1.1 1,579,153 + +0.2 1,579,154 - -0.6 1,579,341 - Pf6N2E2_1343 0.14 +0.1 1,579,610 + Pf6N2E2_1343 0.44 -0.6 1,579,610 + Pf6N2E2_1343 0.44 -0.4 1,579,611 - Pf6N2E2_1343 0.44 +0.1 1,579,668 - Pf6N2E2_1343 0.50 -1.1 1,579,928 + Pf6N2E2_1343 0.78 -1.5 1,579,928 + Pf6N2E2_1343 0.78 -0.4 1,580,169 + -0.3 1,580,199 + -0.6 1,580,200 - -0.2 1,580,200 - -0.5 1,580,200 - -0.3 1,580,453 + Pf6N2E2_1344 0.25 +0.1 1,580,453 + Pf6N2E2_1344 0.25 -0.5 1,580,453 + Pf6N2E2_1344 0.25 -0.3 1,580,453 + Pf6N2E2_1344 0.25 +0.9 1,580,453 + Pf6N2E2_1344 0.25 -0.7 1,580,453 + Pf6N2E2_1344 0.25 -0.1 1,580,454 - Pf6N2E2_1344 0.25 +0.3 1,580,506 - Pf6N2E2_1344 0.31 -0.3 1,580,550 + Pf6N2E2_1344 0.36 +0.5 1,580,651 + Pf6N2E2_1344 0.48 +0.2 1,580,709 - Pf6N2E2_1344 0.55 -0.0 1,580,709 - Pf6N2E2_1344 0.55 -0.3 1,580,753 + Pf6N2E2_1344 0.60 -1.1 1,580,753 + Pf6N2E2_1344 0.60 -0.5 1,580,753 + Pf6N2E2_1344 0.60 +0.4 1,580,753 + Pf6N2E2_1344 0.60 +0.5 1,580,754 - Pf6N2E2_1344 0.60 +0.1 1,580,793 - Pf6N2E2_1344 0.65 +2.4 1,580,794 + Pf6N2E2_1344 0.65 -0.3 1,580,794 + Pf6N2E2_1344 0.65 -2.4 1,580,795 - Pf6N2E2_1344 0.65 +1.1 1,580,987 + Pf6N2E2_1344 0.88 -0.3 1,580,987 + Pf6N2E2_1344 0.88 -0.8 1,580,987 + Pf6N2E2_1344 0.88 +0.4 1,580,991 - Pf6N2E2_1344 0.89 +1.0 1,580,991 - Pf6N2E2_1344 0.89 +0.2 1,581,107 - +1.6
Or see this region's nucleotide sequence