Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS17730

Experiment: R2A with Selective_ion_mix_1 1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Selective_ion_mix_1 1 X
3,878,016	+		LRK54_RS17725	0.40	+0.0
3,878,017	-		LRK54_RS17725	0.40	+1.2
3,878,051	+		LRK54_RS17725	0.42	+0.3
3,878,051	+		LRK54_RS17725	0.42	+1.0
3,878,051	+		LRK54_RS17725	0.42	+0.7
3,878,052	-		LRK54_RS17725	0.42	-0.6
3,878,052	-		LRK54_RS17725	0.42	+1.6
3,878,052	-		LRK54_RS17725	0.42	+0.4
3,878,052	-		LRK54_RS17725	0.42	+0.3
3,878,141	+		LRK54_RS17725	0.48	+0.6
3,878,141	+		LRK54_RS17725	0.48	-0.6
3,878,142	-		LRK54_RS17725	0.49	-1.7
3,878,142	-		LRK54_RS17725	0.49	-1.3
3,878,142	-		LRK54_RS17725	0.49	+0.0
3,878,142	-		LRK54_RS17725	0.49	+0.0
3,878,156	+		LRK54_RS17725	0.49	-0.4
3,878,157	-		LRK54_RS17725	0.50	-0.8
3,878,157	-		LRK54_RS17725	0.50	-0.6
3,878,157	-		LRK54_RS17725	0.50	-1.9
3,878,366	+		LRK54_RS17725	0.64	-2.1
3,878,366	+		LRK54_RS17725	0.64	+1.0
3,878,366	+		LRK54_RS17725	0.64	-1.5
3,878,367	-		LRK54_RS17725	0.64	+0.4
3,878,367	-		LRK54_RS17725	0.64	-0.5
3,878,367	-		LRK54_RS17725	0.64	-0.5
3,878,367	-		LRK54_RS17725	0.64	+0.4
3,878,367	-		LRK54_RS17725	0.64	-1.8
3,878,367	-		LRK54_RS17725	0.64	+0.1
3,878,389	+		LRK54_RS17725	0.65	-0.7
3,878,389	+		LRK54_RS17725	0.65	-1.6
3,878,389	+		LRK54_RS17725	0.65	+0.4
3,878,390	-		LRK54_RS17725	0.65	-1.3
3,878,390	-		LRK54_RS17725	0.65	-1.1
3,878,390	-		LRK54_RS17725	0.65	-2.2
3,878,396	+		LRK54_RS17725	0.66	-0.8
3,878,396	+		LRK54_RS17725	0.66	-1.3
3,878,397	-		LRK54_RS17725	0.66	-0.0
3,878,397	-		LRK54_RS17725	0.66	-1.1
3,878,525	+		LRK54_RS17725	0.74	+0.5
3,878,525	+		LRK54_RS17725	0.74	+1.3
3,878,526	-		LRK54_RS17725	0.75	-0.1
3,878,574	-		LRK54_RS17725	0.78	+1.0
3,878,732	+		LRK54_RS17725	0.88	-0.1
3,878,733	-		LRK54_RS17725	0.89	-0.7
3,878,733	-		LRK54_RS17725	0.89	+0.4
3,878,733	-		LRK54_RS17725	0.89	-0.6
3,878,733	-		LRK54_RS17725	0.89	+0.0
3,878,733	-		LRK54_RS17725	0.89	-0.9
3,878,735	+		LRK54_RS17725	0.89	-1.8
3,878,735	+		LRK54_RS17725	0.89	-1.0
3,878,735	+		LRK54_RS17725	0.89	+1.3
3,878,735	+		LRK54_RS17725	0.89	+0.3
3,878,736	-		LRK54_RS17725	0.89	-0.7
3,878,849	+				-1.2
3,878,850	-				-1.3
3,878,850	-				+0.1
3,878,850	-				-1.2
3,878,900	+				-1.5
3,879,095	+		LRK54_RS17730	0.12	-0.4
3,879,123	+		LRK54_RS17730	0.16	+0.4
3,879,308	+		LRK54_RS17730	0.42	+1.6
3,879,309	-		LRK54_RS17730	0.42	+0.7
3,879,309	-		LRK54_RS17730	0.42	+0.4
3,879,378	+		LRK54_RS17730	0.52	+1.0
3,879,378	+		LRK54_RS17730	0.52	+1.2
3,879,378	+		LRK54_RS17730	0.52	-1.4
3,879,378	+		LRK54_RS17730	0.52	+0.5
3,879,378	+		LRK54_RS17730	0.52	-0.4
3,879,378	+		LRK54_RS17730	0.52	+0.0
3,879,379	-		LRK54_RS17730	0.52	+0.2
3,879,379	-		LRK54_RS17730	0.52	-0.3
3,879,379	-		LRK54_RS17730	0.52	-0.7
3,879,398	+		LRK54_RS17730	0.55	-0.1
3,879,399	-		LRK54_RS17730	0.55	-0.7
3,879,567	+		LRK54_RS17730	0.78	+0.2
3,879,568	-		LRK54_RS17730	0.79	+0.8
3,879,782	-				-1.2
3,879,929	+		LRK54_RS17735	0.11	+1.2
3,879,929	+		LRK54_RS17735	0.11	-0.4
3,879,929	+		LRK54_RS17735	0.11	-1.0
3,879,929	+		LRK54_RS17735	0.11	-0.5
3,879,930	-		LRK54_RS17735	0.11	+0.6
3,880,360	+		LRK54_RS17735	0.33	-1.6
3,880,360	+		LRK54_RS17735	0.33	-0.3
3,880,360	+		LRK54_RS17735	0.33	-0.1
3,880,361	-		LRK54_RS17735	0.33	+0.1
3,880,361	-		LRK54_RS17735	0.33	+1.2
3,880,361	-		LRK54_RS17735	0.33	+0.5
3,880,370	-		LRK54_RS17735	0.34	-1.3
3,880,381	+		LRK54_RS17735	0.34	-0.7
3,880,382	-		LRK54_RS17735	0.34	-1.1
3,880,427	+		LRK54_RS17735	0.36	-0.7
3,880,427	+		LRK54_RS17735	0.36	+0.3
3,880,427	+		LRK54_RS17735	0.36	-0.3
3,880,427	+		LRK54_RS17735	0.36	-0.8
3,880,520	+		LRK54_RS17735	0.41	-0.4
3,880,520	+		LRK54_RS17735	0.41	-0.5
3,880,520	+		LRK54_RS17735	0.41	-1.6
3,880,520	+		LRK54_RS17735	0.41	+0.3
3,880,520	+		LRK54_RS17735	0.41	-0.7
3,880,520	+		LRK54_RS17735	0.41	+1.3
3,880,520	+		LRK54_RS17735	0.41	-2.6
3,880,520	+		LRK54_RS17735	0.41	-0.8
3,880,520	+		LRK54_RS17735	0.41	-1.1
3,880,520	+		LRK54_RS17735	0.41	-1.9
3,880,520	+		LRK54_RS17735	0.41	-0.8
3,880,521	-		LRK54_RS17735	0.41	-2.3
3,880,521	-		LRK54_RS17735	0.41	-0.9
3,880,521	-		LRK54_RS17735	0.41	-1.1
3,880,521	-		LRK54_RS17735	0.41	+0.5
3,880,521	-		LRK54_RS17735	0.41	-1.0
3,880,521	-		LRK54_RS17735	0.41	+0.5
3,880,521	-		LRK54_RS17735	0.41	+1.9
3,880,546	+		LRK54_RS17735	0.42	-0.7
3,880,546	+		LRK54_RS17735	0.42	+1.6
3,880,546	+		LRK54_RS17735	0.42	-0.3
3,880,546	+		LRK54_RS17735	0.42	+0.1
3,880,547	-		LRK54_RS17735	0.43	-1.0
3,880,547	-		LRK54_RS17735	0.43	-0.5
3,880,547	-		LRK54_RS17735	0.43	+1.2