Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS09145

Experiment: R2A with Selective_ion_mix_1 1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Selective_ion_mix_1 1 X
2,003,556	+				-0.8
2,003,556	+				-0.7
2,003,556	+				+0.3
2,003,556	+				+1.3
2,003,556	+				-1.1
2,003,556	+				+0.1
2,003,556	+				+0.5
2,003,556	+				-0.8
2,003,556	+				-0.1
2,003,556	+				-0.2
2,003,556	+				-2.9
2,003,556	+				-1.3
2,003,557	-				-0.3
2,003,557	-				-0.1
2,003,557	-				-0.2
2,003,557	-				-0.4
2,003,695	+				-0.9
2,003,695	+				+1.1
2,003,695	+				-0.2
2,003,695	+				-0.8
2,003,695	+				+1.5
2,003,695	+				+1.3
2,003,695	+				-1.0
2,003,695	+				-2.1
2,003,695	+				-0.9
2,003,695	+				-0.3
2,003,695	+				-0.3
2,003,695	+				-0.8
2,003,695	+				+0.8
2,003,696	-				-0.9
2,003,696	-				-0.6
2,003,696	-				+0.1
2,003,929	+		LRK54_RS09145	0.39	+0.2
2,003,929	+		LRK54_RS09145	0.39	-0.9
2,003,929	+		LRK54_RS09145	0.39	+0.9
2,003,929	+		LRK54_RS09145	0.39	-1.8
2,003,929	+		LRK54_RS09145	0.39	-1.0
2,003,929	+		LRK54_RS09145	0.39	+0.7
2,003,930	-		LRK54_RS09145	0.39	-0.6
2,003,930	-		LRK54_RS09145	0.39	+1.3
2,003,930	-		LRK54_RS09145	0.39	+1.3
2,003,930	-		LRK54_RS09145	0.39	+0.6
2,004,007	+		LRK54_RS09145	0.48	+1.1
2,004,007	+		LRK54_RS09145	0.48	+1.0
2,004,007	+		LRK54_RS09145	0.48	+1.5
2,004,007	+		LRK54_RS09145	0.48	+1.1
2,004,007	+		LRK54_RS09145	0.48	+1.3
2,004,007	+		LRK54_RS09145	0.48	-1.3
2,004,007	+		LRK54_RS09145	0.48	+1.7
2,004,007	+		LRK54_RS09145	0.48	-1.2
2,004,007	+		LRK54_RS09145	0.48	+1.6
2,004,007	+		LRK54_RS09145	0.48	-0.8
2,004,007	+		LRK54_RS09145	0.48	-1.5
2,004,007	+		LRK54_RS09145	0.48	-1.1
2,004,007	+		LRK54_RS09145	0.48	+1.2
2,004,007	+		LRK54_RS09145	0.48	+0.9
2,004,007	+		LRK54_RS09145	0.48	-2.3
2,004,007	+		LRK54_RS09145	0.48	+0.1
2,004,007	+		LRK54_RS09145	0.48	+0.8
2,004,007	+		LRK54_RS09145	0.48	-0.9
2,004,007	+		LRK54_RS09145	0.48	+1.8
2,004,007	+		LRK54_RS09145	0.48	+0.8
2,004,007	+		LRK54_RS09145	0.48	+1.7
2,004,007	+		LRK54_RS09145	0.48	+3.1
2,004,007	+		LRK54_RS09145	0.48	+3.2
2,004,007	+		LRK54_RS09145	0.48	+0.5
2,004,007	+		LRK54_RS09145	0.48	+0.7
2,004,007	+		LRK54_RS09145	0.48	+0.8
2,004,007	+		LRK54_RS09145	0.48	+1.2
2,004,007	+		LRK54_RS09145	0.48	-0.8
2,004,007	+		LRK54_RS09145	0.48	+1.9
2,004,007	+		LRK54_RS09145	0.48	-1.2
2,004,007	+		LRK54_RS09145	0.48	+0.3
2,004,007	+		LRK54_RS09145	0.48	-1.0
2,004,007	+		LRK54_RS09145	0.48	-1.5
2,004,007	+		LRK54_RS09145	0.48	-0.4
2,004,007	+		LRK54_RS09145	0.48	+0.5
2,004,007	+		LRK54_RS09145	0.48	-0.2
2,004,007	+		LRK54_RS09145	0.48	-0.1
2,004,007	+		LRK54_RS09145	0.48	-1.5
2,004,008	-		LRK54_RS09145	0.48	-0.6
2,004,008	-		LRK54_RS09145	0.48	+0.2
2,004,008	-		LRK54_RS09145	0.48	+1.3
2,004,008	-		LRK54_RS09145	0.48	-0.3
2,004,008	-		LRK54_RS09145	0.48	-2.3
2,004,008	-		LRK54_RS09145	0.48	+0.5
2,004,008	-		LRK54_RS09145	0.48	-1.0
2,004,008	-		LRK54_RS09145	0.48	+0.9
2,004,008	-		LRK54_RS09145	0.48	+0.0
2,004,008	-		LRK54_RS09145	0.48	-0.1
2,004,008	-		LRK54_RS09145	0.48	+4.6
2,004,008	-		LRK54_RS09145	0.48	-1.5
2,004,008	-		LRK54_RS09145	0.48	+0.1
2,004,008	-		LRK54_RS09145	0.48	+0.2
2,004,008	-		LRK54_RS09145	0.48	-0.9
2,004,008	-		LRK54_RS09145	0.48	-0.4
2,004,008	-		LRK54_RS09145	0.48	-0.8
2,004,008	-		LRK54_RS09145	0.48	+1.1
2,004,008	-		LRK54_RS09145	0.48	-0.7
2,004,008	-		LRK54_RS09145	0.48	-1.2
2,004,008	-		LRK54_RS09145	0.48	+1.8
2,004,008	-		LRK54_RS09145	0.48	+1.0
2,004,008	-		LRK54_RS09145	0.48	-1.1
2,004,008	-		LRK54_RS09145	0.48	-0.1
2,004,008	-		LRK54_RS09145	0.48	-1.4
2,004,008	-		LRK54_RS09145	0.48	+0.5
2,004,052	+		LRK54_RS09145	0.54	+0.1
2,004,052	+		LRK54_RS09145	0.54	+0.4
2,004,052	+		LRK54_RS09145	0.54	-0.6
2,004,052	+		LRK54_RS09145	0.54	-0.2
2,004,052	+		LRK54_RS09145	0.54	+0.4
2,004,052	+		LRK54_RS09145	0.54	-1.0
2,004,052	+		LRK54_RS09145	0.54	-0.0
2,004,052	+		LRK54_RS09145	0.54	+1.1
2,004,052	+		LRK54_RS09145	0.54	-0.1
2,004,052	+		LRK54_RS09145	0.54	-0.4
2,004,052	+		LRK54_RS09145	0.54	+0.2
2,004,052	+		LRK54_RS09145	0.54	-1.9
2,004,052	+		LRK54_RS09145	0.54	-0.4
2,004,052	+		LRK54_RS09145	0.54	+1.6
2,004,052	+		LRK54_RS09145	0.54	-0.4
2,004,052	+		LRK54_RS09145	0.54	+1.6
2,004,052	+		LRK54_RS09145	0.54	+1.1
2,004,052	+		LRK54_RS09145	0.54	-1.1
2,004,052	+		LRK54_RS09145	0.54	-0.6
2,004,052	+		LRK54_RS09145	0.54	-1.1
2,004,052	+		LRK54_RS09145	0.54	+0.9
2,004,052	+		LRK54_RS09145	0.54	+0.2
2,004,052	+		LRK54_RS09145	0.54	+1.5
2,004,052	+		LRK54_RS09145	0.54	+0.1
2,004,052	+		LRK54_RS09145	0.54	-1.4
2,004,052	+		LRK54_RS09145	0.54	+0.1
2,004,052	+		LRK54_RS09145	0.54	+0.1
2,004,052	+		LRK54_RS09145	0.54	+0.7
2,004,052	+		LRK54_RS09145	0.54	+0.4
2,004,052	+		LRK54_RS09145	0.54	-0.1
2,004,052	+		LRK54_RS09145	0.54	-1.7
2,004,052	+		LRK54_RS09145	0.54	-0.3
2,004,052	+		LRK54_RS09145	0.54	-1.0
2,004,052	+		LRK54_RS09145	0.54	+0.3
2,004,052	+		LRK54_RS09145	0.54	-0.3
2,004,052	+		LRK54_RS09145	0.54	-0.3
2,004,052	+		LRK54_RS09145	0.54	-1.0
2,004,052	+		LRK54_RS09145	0.54	+0.3
2,004,052	+		LRK54_RS09145	0.54	-0.4
2,004,052	+		LRK54_RS09145	0.54	-0.7
2,004,052	+		LRK54_RS09145	0.54	-0.2
2,004,053	-		LRK54_RS09145	0.54	-0.4
2,004,053	-		LRK54_RS09145	0.54	-0.5
2,004,053	-		LRK54_RS09145	0.54	-2.3
2,004,053	-		LRK54_RS09145	0.54	+1.9
2,004,053	-		LRK54_RS09145	0.54	-0.3
2,004,053	-		LRK54_RS09145	0.54	+0.2
2,004,053	-		LRK54_RS09145	0.54	-3.1
2,004,053	-		LRK54_RS09145	0.54	-0.9
2,004,053	-		LRK54_RS09145	0.54	+1.1
2,004,053	-		LRK54_RS09145	0.54	-0.7
2,004,053	-		LRK54_RS09145	0.54	+1.3
2,004,053	-		LRK54_RS09145	0.54	+0.4
2,004,053	-		LRK54_RS09145	0.54	-0.5
2,004,053	-		LRK54_RS09145	0.54	-1.2
2,004,053	-		LRK54_RS09145	0.54	+0.6
2,004,053	-		LRK54_RS09145	0.54	-1.4
2,004,053	-		LRK54_RS09145	0.54	+0.6
2,004,053	-		LRK54_RS09145	0.54	-0.3
2,004,053	-		LRK54_RS09145	0.54	+0.4
2,004,053	-		LRK54_RS09145	0.54	-1.3
2,004,053	-		LRK54_RS09145	0.54	-0.7
2,004,053	-		LRK54_RS09145	0.54	+0.1
2,004,053	-		LRK54_RS09145	0.54	-0.7
2,004,053	-		LRK54_RS09145	0.54	+0.5
2,004,053	-		LRK54_RS09145	0.54	+0.7
2,004,053	-		LRK54_RS09145	0.54	+0.4
2,004,053	-		LRK54_RS09145	0.54	-0.2
2,004,053	-		LRK54_RS09145	0.54	+0.7
2,004,053	-		LRK54_RS09145	0.54	+0.4
2,004,053	-		LRK54_RS09145	0.54	+0.8
2,004,053	-		LRK54_RS09145	0.54	+1.1
2,004,100	+		LRK54_RS09145	0.60	+0.2
2,004,100	+		LRK54_RS09145	0.60	+0.5
2,004,100	+		LRK54_RS09145	0.60	-0.2
2,004,100	+		LRK54_RS09145	0.60	+1.5
2,004,101	-		LRK54_RS09145	0.60	+0.5
2,004,101	-		LRK54_RS09145	0.60	-0.6
2,004,101	-		LRK54_RS09145	0.60	+0.1
2,004,101	-		LRK54_RS09145	0.60	+2.8
2,004,315	+		LRK54_RS09145	0.87	+0.5
2,004,315	+		LRK54_RS09145	0.87	-1.4
2,004,316	-		LRK54_RS09145	0.87	+1.5
2,004,346	+				-0.5
2,004,346	+				-0.7
2,004,346	+				+0.8
2,004,346	+				-1.1
2,004,346	+				-1.0
2,004,346	+				-0.5
2,004,346	+				-1.1
2,004,346	+				-1.4
2,004,346	+				-1.5
2,004,346	+				+1.4
2,004,347	-				-0.4
2,004,347	-				+0.2
2,004,347	-				+0.1
2,004,347	-				-0.8
2,004,347	-				+1.3
2,004,347	-				-1.2
2,004,347	-				-1.8
2,004,347	-				+1.1
2,004,418	+				-0.4
2,004,418	+				-0.5
2,004,418	+				-0.9
2,004,418	+				-0.8
2,004,418	+				-0.7
2,004,418	+				+2.6
2,004,418	+				+1.5
2,004,418	+				-0.9
2,004,418	+				-0.5
2,004,418	+				-1.0
2,004,418	+				+0.3
2,004,418	+				-0.8
2,004,418	+				-0.0
2,004,418	+				+0.3
2,004,418	+				-0.6
2,004,418	+				-1.0
2,004,418	+				-1.8
2,004,419	-				-1.7
2,004,419	-				-0.8
2,004,419	-				-0.1
2,004,419	-				+1.2
2,004,419	-				+1.8
2,004,419	-				-2.1
2,004,419	-				-2.9
2,004,419	-				-0.1
2,004,419	-				+0.9
2,004,419	-				+0.8
2,004,419	-				-0.1
2,004,419	-				+0.0
2,004,419	-				+1.8
2,004,419	-				-1.3
2,004,419	-				-0.6
2,004,419	-				-1.7
2,004,435	+				+1.3
2,004,435	+				+1.0
2,004,435	+				+1.3
2,004,435	+				+0.7
2,004,435	+				-0.2
2,004,435	+				-1.4
2,004,435	+				-1.7
2,004,435	+				-2.8
2,004,435	+				-1.5
2,004,435	+				+0.1
2,004,436	-				+1.1
2,004,436	-				+0.0
2,004,436	-				+1.8
2,004,436	-				+0.3
2,004,436	-				-2.4
2,004,436	-				-0.3
2,004,436	-				+0.8
2,004,436	-				-2.0
2,004,436	-				+0.9
2,004,436	-				+0.2
2,004,579	+		LRK54_RS09150	0.19	+0.7
2,004,579	+		LRK54_RS09150	0.19	-0.4
2,004,579	+		LRK54_RS09150	0.19	-0.6
2,004,579	+		LRK54_RS09150	0.19	-0.7
2,004,579	+		LRK54_RS09150	0.19	-0.5
2,004,579	+		LRK54_RS09150	0.19	+0.3
2,004,579	+		LRK54_RS09150	0.19	+1.2
2,004,579	+		LRK54_RS09150	0.19	-0.3
2,004,579	+		LRK54_RS09150	0.19	-0.3
2,004,579	+		LRK54_RS09150	0.19	-0.3
2,004,579	+		LRK54_RS09150	0.19	+0.1
2,004,580	-		LRK54_RS09150	0.19	+0.5
2,004,580	-		LRK54_RS09150	0.19	-0.7
2,004,580	-		LRK54_RS09150	0.19	+1.2
2,004,580	-		LRK54_RS09150	0.19	-0.9
2,004,580	-		LRK54_RS09150	0.19	+1.4
2,004,580	-		LRK54_RS09150	0.19	-0.7
2,004,580	-		LRK54_RS09150	0.19	-0.8
2,004,580	-		LRK54_RS09150	0.19	+0.5
2,004,736	+		LRK54_RS09150	0.40	+1.2
2,004,738	+		LRK54_RS09150	0.40	+1.1
2,004,738	+		LRK54_RS09150	0.40	-1.8
2,004,738	+		LRK54_RS09150	0.40	+1.0
2,004,738	+		LRK54_RS09150	0.40	+1.3
2,004,738	+		LRK54_RS09150	0.40	-0.5
2,004,738	+		LRK54_RS09150	0.40	-1.2
2,004,738	+		LRK54_RS09150	0.40	+0.1
2,004,739	-		LRK54_RS09150	0.41	+0.2
2,004,739	-		LRK54_RS09150	0.41	-1.8
2,004,739	-		LRK54_RS09150	0.41	-1.3
2,004,739	-		LRK54_RS09150	0.41	+0.6
2,004,756	+		LRK54_RS09150	0.43	-0.8
2,004,757	-		LRK54_RS09150	0.43	+1.9
2,004,762	+		LRK54_RS09150	0.44	+1.8
2,004,762	+		LRK54_RS09150	0.44	-1.5
2,004,762	+		LRK54_RS09150	0.44	-2.3
2,004,762	+		LRK54_RS09150	0.44	+0.5
2,004,762	+		LRK54_RS09150	0.44	+0.7
2,004,762	+		LRK54_RS09150	0.44	-1.2
2,004,762	+		LRK54_RS09150	0.44	-0.2
2,004,762	+		LRK54_RS09150	0.44	+0.6
2,004,762	+		LRK54_RS09150	0.44	-0.7
2,004,762	+		LRK54_RS09150	0.44	-0.6
2,004,762	+		LRK54_RS09150	0.44	+0.2
2,004,762	+		LRK54_RS09150	0.44	-1.2
2,004,762	+		LRK54_RS09150	0.44	+0.8
2,004,762	+		LRK54_RS09150	0.44	+0.1
2,004,762	+		LRK54_RS09150	0.44	+0.8
2,004,762	+		LRK54_RS09150	0.44	-0.6
2,004,762	+		LRK54_RS09150	0.44	-1.9
2,004,762	+		LRK54_RS09150	0.44	+0.5
2,004,762	+		LRK54_RS09150	0.44	+0.5
2,004,762	+		LRK54_RS09150	0.44	-1.2
2,004,762	+		LRK54_RS09150	0.44	+1.0
2,004,762	+		LRK54_RS09150	0.44	+1.0
2,004,762	+		LRK54_RS09150	0.44	-0.7
2,004,762	+		LRK54_RS09150	0.44	-2.9
2,004,762	+		LRK54_RS09150	0.44	-0.4
2,004,762	+		LRK54_RS09150	0.44	+1.1
2,004,762	+		LRK54_RS09150	0.44	+0.0
2,004,763	-		LRK54_RS09150	0.44	-0.3
2,004,763	-		LRK54_RS09150	0.44	-0.8
2,004,763	-		LRK54_RS09150	0.44	-0.2
2,004,763	-		LRK54_RS09150	0.44	-0.3
2,004,763	-		LRK54_RS09150	0.44	+0.2
2,004,763	-		LRK54_RS09150	0.44	-0.5
2,004,763	-		LRK54_RS09150	0.44	-0.4
2,004,763	-		LRK54_RS09150	0.44	-0.3
2,004,763	-		LRK54_RS09150	0.44	+1.9
2,004,763	-		LRK54_RS09150	0.44	+1.7
2,004,763	-		LRK54_RS09150	0.44	+0.2
2,004,763	-		LRK54_RS09150	0.44	+1.1
2,004,763	-		LRK54_RS09150	0.44	-0.3
2,004,763	-		LRK54_RS09150	0.44	-0.9
2,004,763	-		LRK54_RS09150	0.44	+1.5
2,004,763	-		LRK54_RS09150	0.44	+0.2
2,004,763	-		LRK54_RS09150	0.44	+2.1
2,004,763	-		LRK54_RS09150	0.44	+1.1
2,004,763	-		LRK54_RS09150	0.44	-0.4
2,004,763	-		LRK54_RS09150	0.44	+0.4
2,004,763	-		LRK54_RS09150	0.44	+4.6
2,004,763	-		LRK54_RS09150	0.44	-1.2
2,004,763	-		LRK54_RS09150	0.44	-0.9
2,004,763	-		LRK54_RS09150	0.44	-0.0
2,004,763	-		LRK54_RS09150	0.44	+0.9
2,004,763	-		LRK54_RS09150	0.44	-0.4
2,004,763	-		LRK54_RS09150	0.44	-1.3
2,005,233	+				-0.5
2,005,234	-				-0.4
2,005,342	-		LRK54_RS09155	0.16	-0.8
2,005,342	-		LRK54_RS09155	0.16	+0.8
2,005,342	-		LRK54_RS09155	0.16	-0.1
2,005,342	-		LRK54_RS09155	0.16	+1.6
2,005,342	-		LRK54_RS09155	0.16	+0.2
2,005,342	-		LRK54_RS09155	0.16	+0.2
2,005,342	-		LRK54_RS09155	0.16	+1.0