Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04265

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04265 and H281DRAFT_04266 are separated by 187 nucleotides H281DRAFT_04265: H281DRAFT_04265 - dihydroorotase, at 383,053 to 384,123 _04265 H281DRAFT_04266: H281DRAFT_04266 - glutamine amidotransferase, at 384,311 to 385,246 _04266 Position (kb) 383 384 385Strain fitness (log2 ratio) -1 0 1 2 3 4at 382.148 kb on - strandat 382.176 kb on - strandat 382.176 kb on - strandat 382.191 kb on + strandat 382.192 kb on - strandat 382.347 kb on + strandat 382.358 kb on + strandat 382.636 kb on + strandat 382.636 kb on + strandat 382.637 kb on - strandat 382.746 kb on + strandat 382.763 kb on + strandat 382.763 kb on + strandat 382.860 kb on + strandat 382.861 kb on - strandat 383.043 kb on + strandat 383.044 kb on - strandat 383.044 kb on - strandat 383.044 kb on - strandat 383.044 kb on - strandat 383.044 kb on - strandat 383.044 kb on - strandat 383.186 kb on + strand, within H281DRAFT_04265at 384.276 kb on + strandat 384.276 kb on + strandat 384.301 kb on + strandat 384.302 kb on - strandat 384.674 kb on + strand, within H281DRAFT_04266at 384.675 kb on - strand, within H281DRAFT_04266at 384.800 kb on - strandat 384.887 kb on + strand, within H281DRAFT_04266at 384.959 kb on + strand, within H281DRAFT_04266at 385.071 kb on + strand, within H281DRAFT_04266at 385.071 kb on + strand, within H281DRAFT_04266

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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382,148 - +0.7
382,176 - -0.7
382,176 - +0.4
382,191 + +0.3
382,192 - +0.6
382,347 + +0.3
382,358 + +0.0
382,636 + -0.5
382,636 + -0.3
382,637 - +0.1
382,746 + +0.3
382,763 + -0.0
382,763 + -0.7
382,860 + +0.4
382,861 - +0.5
383,043 + -0.4
383,044 - -0.2
383,044 - +1.0
383,044 - -0.3
383,044 - -1.6
383,044 - -0.2
383,044 - -0.1
383,186 + H281DRAFT_04265 0.12 -1.3
384,276 + +0.3
384,276 + +3.8
384,301 + +0.1
384,302 - +0.0
384,674 + H281DRAFT_04266 0.39 -0.7
384,675 - H281DRAFT_04266 0.39 -0.4
384,800 - +1.0
384,887 + H281DRAFT_04266 0.62 -0.4
384,959 + H281DRAFT_04266 0.69 -1.1
385,071 + H281DRAFT_04266 0.81 -0.0
385,071 + H281DRAFT_04266 0.81 +0.4

Or see this region's nucleotide sequence