Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3042

Experiment: 1-ethyl-3-methylimidazolium acetate 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 20 mM
3,177,363	-				+0.2
3,177,408	+				-0.2
3,177,408	+				+0.6
3,177,409	-				-0.4
3,177,426	+				-0.1
3,177,426	+				-0.3
3,177,427	-				-0.1
3,177,427	-				+0.3
3,177,427	-				+0.2
3,177,427	-				+0.1
3,177,427	-				-0.1
3,177,548	-				-0.2
3,177,626	+				+0.4
3,177,626	+				-0.4
3,177,627	-				-0.2
3,177,627	-				-0.3
3,177,627	-				-0.3
3,177,627	-				-1.0
3,177,627	-				+0.7
3,177,627	-				-0.5
3,177,935	+		Ga0059261_3041	0.44	+3.5
3,177,935	+		Ga0059261_3041	0.44	+0.2
3,177,935	+		Ga0059261_3041	0.44	-0.3
3,177,935	+		Ga0059261_3041	0.44	-0.3
3,177,935	+		Ga0059261_3041	0.44	+0.4
3,177,935	+		Ga0059261_3041	0.44	-0.6
3,177,935	+		Ga0059261_3041	0.44	+0.0
3,177,935	+		Ga0059261_3041	0.44	+0.6
3,177,935	+		Ga0059261_3041	0.44	+0.7
3,177,936	-		Ga0059261_3041	0.44	-0.9
3,178,072	+		Ga0059261_3041	0.68	-0.2
3,178,072	+		Ga0059261_3041	0.68	-1.1
3,178,072	+		Ga0059261_3041	0.68	-0.6
3,178,096	+		Ga0059261_3041	0.72	+1.8
3,178,096	+		Ga0059261_3041	0.72	+0.1
3,178,096	+		Ga0059261_3041	0.72	+0.0
3,178,096	+		Ga0059261_3041	0.72	+0.7
3,178,096	+		Ga0059261_3041	0.72	+0.2
3,178,097	-		Ga0059261_3041	0.72	-0.1
3,178,097	-		Ga0059261_3041	0.72	-0.3
3,178,097	-		Ga0059261_3041	0.72	-0.2
3,178,097	-		Ga0059261_3041	0.72	-0.0
3,178,097	-		Ga0059261_3041	0.72	-0.1
3,178,097	-		Ga0059261_3041	0.72	-0.5
3,178,097	-		Ga0059261_3041	0.72	+1.6
3,178,097	-		Ga0059261_3041	0.72	+0.5
3,178,097	-		Ga0059261_3041	0.72	-0.6
3,178,097	-		Ga0059261_3041	0.72	-0.4
3,178,154	+		Ga0059261_3041	0.82	-0.7
3,178,155	-		Ga0059261_3041	0.82	+0.5
3,178,156	+		Ga0059261_3041	0.82	+0.4
3,178,156	+		Ga0059261_3041	0.82	+0.4
3,178,156	+				+1.1
3,178,156	+		Ga0059261_3041	0.82	+0.5
3,178,156	+		Ga0059261_3041	0.82	-0.3
3,178,156	+		Ga0059261_3041	0.82	+0.1
3,178,156	+		Ga0059261_3041	0.82	-0.7
3,178,156	+		Ga0059261_3041	0.82	+0.6
3,178,156	+		Ga0059261_3041	0.82	+0.2
3,178,156	+		Ga0059261_3041	0.82	-0.7
3,178,156	+		Ga0059261_3041	0.82	+0.1
3,178,156	+		Ga0059261_3041	0.82	-0.2
3,178,156	+		Ga0059261_3041	0.82	+0.1
3,178,156	+		Ga0059261_3041	0.82	+0.7
3,178,156	+		Ga0059261_3041	0.82	+0.1
3,178,156	+		Ga0059261_3041	0.82	+1.3
3,178,156	+		Ga0059261_3041	0.82	-0.1
3,178,156	+		Ga0059261_3041	0.82	+0.0
3,178,156	+		Ga0059261_3041	0.82	+0.4
3,178,156	+		Ga0059261_3041	0.82	-0.5
3,178,156	+		Ga0059261_3041	0.82	-0.5
3,178,156	+		Ga0059261_3041	0.82	-0.2
3,178,156	+		Ga0059261_3041	0.82	+0.6
3,178,156	+		Ga0059261_3041	0.82	-0.6
3,178,156	+				+1.1
3,178,156	+		Ga0059261_3041	0.82	+0.2
3,178,157	-		Ga0059261_3041	0.82	+0.5
3,178,157	-		Ga0059261_3041	0.82	+0.1
3,178,157	-		Ga0059261_3041	0.82	-0.3
3,178,157	-		Ga0059261_3041	0.82	+0.2
3,178,157	-		Ga0059261_3041	0.82	+0.6
3,178,157	-				+0.1
3,178,157	-		Ga0059261_3041	0.82	-0.2
3,178,157	-		Ga0059261_3041	0.82	-0.1
3,178,157	-		Ga0059261_3041	0.82	-0.2
3,178,157	-		Ga0059261_3041	0.82	+0.0
3,178,157	-		Ga0059261_3041	0.82	+2.5
3,178,157	-		Ga0059261_3041	0.82	+1.6
3,178,157	-		Ga0059261_3041	0.82	-0.6
3,178,157	-		Ga0059261_3041	0.82	+0.8
3,178,157	-		Ga0059261_3041	0.82	+2.0
3,178,157	-		Ga0059261_3041	0.82	-0.3
3,178,157	-		Ga0059261_3041	0.82	+0.1
3,178,157	-		Ga0059261_3041	0.82	+0.1
3,178,157	-		Ga0059261_3041	0.82	-0.3
3,178,157	-		Ga0059261_3041	0.82	+1.1
3,178,157	-		Ga0059261_3041	0.82	-0.0
3,178,157	-		Ga0059261_3041	0.82	-0.4
3,178,160	+		Ga0059261_3041	0.83	+0.5
3,178,160	+		Ga0059261_3041	0.83	-0.1
3,178,160	+		Ga0059261_3041	0.83	+0.3
3,178,160	+		Ga0059261_3041	0.83	-0.3
3,178,160	+		Ga0059261_3041	0.83	-0.4
3,178,160	+		Ga0059261_3041	0.83	+0.4
3,178,160	+		Ga0059261_3041	0.83	+0.1
3,178,160	+		Ga0059261_3041	0.83	-0.0
3,178,160	+		Ga0059261_3041	0.83	-0.3
3,178,160	+		Ga0059261_3041	0.83	+0.1
3,178,160	+		Ga0059261_3041	0.83	-0.0
3,178,161	-		Ga0059261_3041	0.83	+0.3
3,178,161	-		Ga0059261_3041	0.83	+0.4
3,178,161	-		Ga0059261_3041	0.83	+0.8
3,178,161	-		Ga0059261_3041	0.83	-0.2
3,178,161	-		Ga0059261_3041	0.83	+0.1
3,178,161	-		Ga0059261_3041	0.83	+0.9
3,178,161	-		Ga0059261_3041	0.83	-0.0
3,178,161	-		Ga0059261_3041	0.83	+0.4
3,178,213	+				+0.8
3,178,213	+				+0.3
3,178,213	+				+0.7
3,178,213	+				-0.0
3,178,213	+				-0.7
3,178,213	+				+0.6
3,178,213	+				+0.1
3,178,213	+				-0.3
3,178,213	+				+0.1
3,178,213	+				+0.1
3,178,213	+				-0.7
3,178,213	+				+0.6
3,178,213	+				+0.4
3,178,213	+				+1.4
3,178,214	-				-0.2
3,178,214	-				-0.6
3,178,214	-				-0.9
3,178,214	-				-0.9
3,178,214	-				-0.3
3,178,214	-				+0.7
3,178,214	-				-0.6
3,178,214	-				+0.9
3,178,214	-				-0.3
3,178,214	-				+0.7
3,178,214	-				+0.4
3,178,214	-				+0.1
3,178,214	-				-0.9
3,178,234	+				-0.6
3,178,266	-				-0.0
3,178,405	+		Ga0059261_3042	0.15	-0.8
3,178,405	+		Ga0059261_3042	0.15	+0.0
3,178,406	-		Ga0059261_3042	0.15	+0.4
3,178,406	-		Ga0059261_3042	0.15	-1.6
3,178,406	-		Ga0059261_3042	0.15	-0.2
3,178,406	-		Ga0059261_3042	0.15	-0.1
3,178,452	+		Ga0059261_3042	0.20	+0.3
3,178,452	+		Ga0059261_3042	0.20	+0.6
3,178,453	-		Ga0059261_3042	0.20	+0.2
3,178,615	+		Ga0059261_3042	0.36	-2.0
3,178,615	+		Ga0059261_3042	0.36	+0.5
3,178,615	+		Ga0059261_3042	0.36	+0.7
3,178,615	+		Ga0059261_3042	0.36	-0.4
3,178,615	+		Ga0059261_3042	0.36	+0.4
3,178,616	-		Ga0059261_3042	0.36	-1.9
3,178,705	+		Ga0059261_3042	0.45	-0.0
3,178,705	+		Ga0059261_3042	0.45	-0.9
3,178,705	+		Ga0059261_3042	0.45	-1.1
3,178,705	+		Ga0059261_3042	0.45	+0.1
3,178,705	+		Ga0059261_3042	0.45	-0.0
3,178,705	+		Ga0059261_3042	0.45	+2.0
3,178,705	+		Ga0059261_3042	0.45	+0.1
3,178,706	-		Ga0059261_3042	0.45	+0.3
3,178,706	-		Ga0059261_3042	0.45	-0.2
3,178,706	-		Ga0059261_3042	0.45	+0.2
3,178,706	-		Ga0059261_3042	0.45	-1.1
3,178,706	-		Ga0059261_3042	0.45	-1.3
3,178,706	-		Ga0059261_3042	0.45	-0.8
3,178,706	-		Ga0059261_3042	0.45	+0.3
3,178,706	-		Ga0059261_3042	0.45	-1.1
3,178,706	-		Ga0059261_3042	0.45	-0.5
3,178,707	+		Ga0059261_3042	0.45	+0.1
3,178,708	-		Ga0059261_3042	0.46	+0.1
3,178,708	-		Ga0059261_3042	0.46	-0.4
3,178,708	-		Ga0059261_3042	0.46	-0.3
3,178,708	-				-0.9
3,178,708	-		Ga0059261_3042	0.46	-0.2
3,178,708	-		Ga0059261_3042	0.46	+0.5
3,178,770	+		Ga0059261_3042	0.52	-0.5
3,178,770	+		Ga0059261_3042	0.52	-0.1
3,178,770	+		Ga0059261_3042	0.52	-0.3
3,178,770	+		Ga0059261_3042	0.52	-0.9
3,178,770	+		Ga0059261_3042	0.52	-0.8
3,178,770	+		Ga0059261_3042	0.52	-0.1
3,178,771	-		Ga0059261_3042	0.52	+0.8
3,178,771	-		Ga0059261_3042	0.52	-0.7
3,178,771	-		Ga0059261_3042	0.52	+1.1
3,178,960	+		Ga0059261_3042	0.71	-1.1
3,178,960	+		Ga0059261_3042	0.71	-2.1
3,178,960	+		Ga0059261_3042	0.71	-0.0
3,178,960	+		Ga0059261_3042	0.71	+0.1
3,178,960	+		Ga0059261_3042	0.71	-1.2
3,178,960	+		Ga0059261_3042	0.71	+0.2
3,178,961	-		Ga0059261_3042	0.71	-1.1
3,178,961	-		Ga0059261_3042	0.71	-0.7
3,178,961	-		Ga0059261_3042	0.71	+0.5
3,178,961	-		Ga0059261_3042	0.71	-1.0
3,178,961	-		Ga0059261_3042	0.71	-0.0
3,178,961	-		Ga0059261_3042	0.71	-0.7
3,178,961	-		Ga0059261_3042	0.71	-0.7
3,178,961	-		Ga0059261_3042	0.71	-0.3
3,178,961	-		Ga0059261_3042	0.71	+0.3
3,179,242	+				-0.3
3,179,242	+				+0.0
3,179,242	+				-0.2
3,179,243	-				-1.1
3,179,243	-				-0.2
3,179,243	-				-1.3
3,179,243	-				+0.2
3,179,261	+				+1.7
3,179,262	-				+0.6
3,179,262	-				+0.3
3,179,266	+				+0.0
3,179,266	+				-0.1
3,179,266	+				+0.2
3,179,266	+				+0.3
3,179,267	-				+1.5
3,179,267	-				-0.2
3,179,333	+				+0.3
3,179,333	+				-0.4
3,179,333	+				-0.6
3,179,333	+				+0.1
3,179,333	+				+0.1
3,179,333	+				-0.3
3,179,333	+				+0.1
3,179,333	+				-0.2
3,179,333	+				+0.5
3,179,333	+				+0.0
3,179,333	+				-0.3
3,179,333	+				+2.7
3,179,333	+				+0.8
3,179,333	+				-0.1
3,179,333	+				-0.2
3,179,334	-				+0.1
3,179,334	-				+0.6
3,179,334	-				+0.1
3,179,334	-				-0.0
3,179,334	-				+0.2
3,179,334	-				-0.4
3,179,334	-				+0.3
3,179,334	-				+1.1
3,179,334	-				-0.7
3,179,334	-				-0.3
3,179,334	-				+0.6
3,179,334	-				-2.5
3,179,334	-				-1.1
3,179,334	-				+0.4
3,179,334	-				-0.5
3,179,334	-				-0.5
3,179,334	-				-0.4
3,179,334	-				+0.6
3,179,334	-				+0.9
3,179,343	-				+0.1
3,179,353	+				+0.2
3,179,353	+				-0.4
3,179,353	+				+0.2
3,179,353	+				+0.8
3,179,353	+				-0.4
3,179,353	+				+0.4
3,179,375	+				+0.1
3,179,376	-				-0.1
3,179,436	+				-1.5
3,179,436	+				-0.5
3,179,436	+				+0.7
3,179,436	+				-0.6
3,179,437	-				-0.2
3,179,437	-				+1.5
3,179,437	-				+0.0
3,179,437	-				-0.3
3,179,437	-				+0.2
3,179,961	+		Ga0059261_3043	0.24	-1.2
3,179,961	+		Ga0059261_3043	0.24	+0.4
3,179,961	+		Ga0059261_3043	0.24	-1.0
3,179,961	+		Ga0059261_3043	0.24	-0.3
3,179,961	+				+1.1
3,179,962	-		Ga0059261_3043	0.24	-0.3
3,179,962	-		Ga0059261_3043	0.24	-0.0
3,179,962	-		Ga0059261_3043	0.24	+0.6
3,179,962	-		Ga0059261_3043	0.24	-1.4
3,179,962	-		Ga0059261_3043	0.24	-0.1
3,180,171	+		Ga0059261_3043	0.33	+0.4
3,180,171	+		Ga0059261_3043	0.33	-0.0
3,180,171	+		Ga0059261_3043	0.33	-0.8
3,180,171	+		Ga0059261_3043	0.33	+1.0
3,180,172	-		Ga0059261_3043	0.33	-0.3
3,180,172	-		Ga0059261_3043	0.33	+0.3
3,180,172	-		Ga0059261_3043	0.33	-0.0
3,180,172	-		Ga0059261_3043	0.33	-0.7
3,180,172	-		Ga0059261_3043	0.33	+0.0
3,180,172	-		Ga0059261_3043	0.33	+0.8
3,180,172	-		Ga0059261_3043	0.33	+0.4
3,180,222	+		Ga0059261_3043	0.35	-0.9
3,180,222	+		Ga0059261_3043	0.35	+0.1
3,180,222	+		Ga0059261_3043	0.35	-1.3
3,180,223	-		Ga0059261_3043	0.35	-0.4
3,180,223	-		Ga0059261_3043	0.35	-0.6
3,180,223	-		Ga0059261_3043	0.35	+0.5
3,180,228	+		Ga0059261_3043	0.35	-1.2
3,180,228	+		Ga0059261_3043	0.35	+0.3
3,180,228	+		Ga0059261_3043	0.35	-1.1
3,180,228	+		Ga0059261_3043	0.35	+0.7
3,180,228	+		Ga0059261_3043	0.35	-1.3
3,180,229	-		Ga0059261_3043	0.35	-0.6
3,180,229	-		Ga0059261_3043	0.35	+0.1
3,180,229	-		Ga0059261_3043	0.35	+0.1
3,180,229	-		Ga0059261_3043	0.35	-1.0
3,180,229	-		Ga0059261_3043	0.35	-0.2