Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2589

Experiment: 1-ethyl-3-methylimidazolium acetate 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 20 mM
2,670,202	+				+0.2
2,670,202	+				-0.3
2,670,203	-				+0.3
2,670,203	-				+0.2
2,670,203	-				-0.5
2,670,203	-				+0.6
2,670,210	+				-0.9
2,670,210	+				+0.2
2,670,210	+				-0.1
2,670,210	+				+0.3
2,670,210	+				+2.2
2,670,211	-				-0.5
2,670,211	-				-0.8
2,670,211	-				+0.2
2,670,211	-				-0.7
2,670,281	-				-0.8
2,670,281	-				+0.6
2,670,281	-				+0.3
2,670,281	-				-0.8
2,670,368	+		Ga0059261_2587	0.12	-0.0
2,670,368	+		Ga0059261_2587	0.12	+0.2
2,670,368	+		Ga0059261_2587	0.12	-1.0
2,670,368	+		Ga0059261_2587	0.12	+0.6
2,670,368	+		Ga0059261_2587	0.12	-0.2
2,670,369	-		Ga0059261_2587	0.12	-0.1
2,670,369	-		Ga0059261_2587	0.12	+0.0
2,670,369	-		Ga0059261_2587	0.12	-0.4
2,670,631	-				-0.1
2,670,658	+				+0.2
2,670,658	+				-0.3
2,670,658	+				-0.2
2,670,658	+				+0.2
2,670,658	+				+0.0
2,670,659	-				-0.0
2,670,659	-				-0.8
2,670,659	-				+0.3
2,670,659	-				-0.6
2,670,659	-				-0.4
2,670,659	-				+0.7
2,670,680	+				-1.8
2,670,680	+				+1.1
2,670,680	+				-0.5
2,670,681	-				+0.6
2,670,750	+				+0.2
2,670,750	+				-0.1
2,670,751	-				+0.2
2,670,761	+				+0.6
2,670,761	+				-0.5
2,670,762	-				-0.2
2,670,764	+				-0.4
2,670,810	+				+0.4
2,670,810	+				-0.2
2,670,810	+				-0.2
2,670,810	+				-0.0
2,670,810	+				-2.2
2,670,810	+				-0.4
2,670,810	+				-0.8
2,670,810	+				+0.8
2,670,810	+				-0.9
2,670,810	+				+0.6
2,670,810	+				+0.2
2,670,810	+				-0.8
2,670,811	-				+0.0
2,670,811	-				+0.2
2,670,811	-				+0.2
2,670,811	-				-1.2
2,670,811	-				+1.2
2,670,811	-				+1.5
2,670,812	+				-0.6
2,670,812	+				-0.5
2,670,812	+				-1.7
2,670,812	+				-0.9
2,670,812	+				-0.0
2,670,812	+				-0.9
2,670,813	-				-0.1
2,670,813	-				+0.2
2,670,813	-				+0.4
2,670,813	-				-1.0
2,670,813	-				+0.2
2,670,870	+		Ga0059261_2588	0.24	+0.5
2,670,870	+		Ga0059261_2588	0.24	-0.9
2,670,870	+				+0.5
2,670,871	-		Ga0059261_2588	0.24	-0.3
2,670,871	-		Ga0059261_2588	0.24	+0.2
2,670,879	+		Ga0059261_2588	0.27	-0.2
2,670,879	+		Ga0059261_2588	0.27	+0.4
2,670,880	-		Ga0059261_2588	0.27	+0.3
2,670,880	-		Ga0059261_2588	0.27	-0.0
2,670,880	-		Ga0059261_2588	0.27	+0.3
2,670,880	-		Ga0059261_2588	0.27	-0.0
2,670,880	-				+0.2
2,670,892	+		Ga0059261_2588	0.30	-0.1
2,670,892	+		Ga0059261_2588	0.30	-0.6
2,670,892	+		Ga0059261_2588	0.30	+0.7
2,670,893	-		Ga0059261_2588	0.31	-0.2
2,670,893	-		Ga0059261_2588	0.31	-0.4
2,670,893	-		Ga0059261_2588	0.31	-0.2
2,670,893	-		Ga0059261_2588	0.31	+0.5
2,671,054	+		Ga0059261_2588	0.75	+0.4
2,671,055	-		Ga0059261_2588	0.76	+0.1
2,671,055	-		Ga0059261_2588	0.76	-0.4
2,671,109	+				+0.2
2,671,109	+				+1.2
2,671,109	+				+0.3
2,671,140	+				-0.4
2,671,140	+				+1.6
2,671,140	+				+0.2
2,671,140	+				+0.2
2,671,141	-				-0.6
2,671,141	-				-0.7
2,671,141	-				+0.0
2,671,141	-				+0.4
2,671,153	+				+2.5
2,671,153	+				+0.4
2,671,153	+				+0.6
2,671,154	-				-0.8
2,671,359	+		Ga0059261_2589	0.16	+0.2
2,671,360	-		Ga0059261_2589	0.16	-0.2
2,671,360	-		Ga0059261_2589	0.16	-0.1
2,671,360	-		Ga0059261_2589	0.16	+0.0
2,671,494	-		Ga0059261_2589	0.27	-0.2
2,671,494	-		Ga0059261_2589	0.27	+0.5
2,671,658	+		Ga0059261_2589	0.41	+0.3
2,671,659	-		Ga0059261_2589	0.41	-0.6
2,672,249	+				+2.2
2,672,249	+				-0.4
2,672,249	+				-0.6
2,672,250	-				-1.1
2,672,296	+				-0.1
2,672,296	+				+0.6
2,672,296	+				-0.4
2,672,397	+				-0.3
2,672,398	-				+0.1
2,672,417	+				+0.9
2,672,417	+				-0.6
2,672,417	+				+0.0
2,672,417	+				-0.2
2,672,417	+				+0.4
2,672,418	-				-0.0
2,672,418	-				-0.0
2,672,418	-				+1.2
2,672,418	-				+0.2
2,672,418	-				+1.1
2,672,418	-				-0.1
2,672,418	-				+0.1
2,672,420	+				+1.1
2,672,420	+				-0.6
2,672,420	+				+1.0
2,672,420	+				-0.4
2,672,421	-				-0.1
2,672,421	-				+0.4
2,672,421	-				-0.2
2,672,421	-				+1.3
2,672,421	-				-0.2
2,672,421	-				-0.5
2,672,421	-				-1.0
2,672,500	+		Ga0059261_2590	0.12	-0.2
2,672,500	+		Ga0059261_2590	0.12	-0.3
2,672,500	+		Ga0059261_2590	0.12	+0.2
2,672,500	+		Ga0059261_2590	0.12	-0.2
2,672,500	+		Ga0059261_2590	0.12	-0.5
2,672,501	-		Ga0059261_2590	0.12	+0.2
2,672,501	-		Ga0059261_2590	0.12	+0.2
2,672,501	-		Ga0059261_2590	0.12	-0.5
2,672,533	+		Ga0059261_2590	0.15	-0.3
2,672,533	+		Ga0059261_2590	0.15	-0.2
2,672,534	-		Ga0059261_2590	0.15	+0.2
2,672,534	-		Ga0059261_2590	0.15	+0.2
2,672,534	-		Ga0059261_2590	0.15	+0.2
2,672,555	-		Ga0059261_2590	0.17	+1.1
2,672,555	-				+0.8
2,672,569	+		Ga0059261_2590	0.18	-1.5
2,672,569	+		Ga0059261_2590	0.18	-0.0
2,672,569	+		Ga0059261_2590	0.18	-0.4
2,672,570	-		Ga0059261_2590	0.18	-0.5
2,672,570	-		Ga0059261_2590	0.18	+2.0
2,672,570	-		Ga0059261_2590	0.18	-1.0
2,672,570	-		Ga0059261_2590	0.18	+0.2
2,672,570	-		Ga0059261_2590	0.18	+0.1
2,672,658	-		Ga0059261_2590	0.26	+0.6
2,672,658	-		Ga0059261_2590	0.26	+0.9
2,672,658	-		Ga0059261_2590	0.26	+0.1
2,672,958	+		Ga0059261_2590	0.53	-0.4
2,672,999	+		Ga0059261_2590	0.56	-0.2
2,673,002	+		Ga0059261_2590	0.57	+0.6
2,673,003	-		Ga0059261_2590	0.57	+0.3
2,673,033	-		Ga0059261_2590	0.59	-1.9
2,673,033	-		Ga0059261_2590	0.59	-0.7
2,673,068	+		Ga0059261_2590	0.63	+0.4
2,673,068	+		Ga0059261_2590	0.63	-0.1
2,673,069	-		Ga0059261_2590	0.63	-0.9
2,673,069	-		Ga0059261_2590	0.63	-0.0
2,673,151	+		Ga0059261_2590	0.70	-0.5
2,673,152	-				-0.1
2,673,341	+		Ga0059261_2590	0.87	-0.0
2,673,342	-		Ga0059261_2590	0.87	-0.9
2,673,342	-		Ga0059261_2590	0.87	+0.1
2,673,342	-		Ga0059261_2590	0.87	-1.3
2,673,342	-		Ga0059261_2590	0.87	-0.8
2,673,342	-		Ga0059261_2590	0.87	+0.1
2,673,342	-		Ga0059261_2590	0.87	-0.9