Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS25275

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
6,146,859	-		CA265_RS25265	0.44	+0.0
6,146,950	+		CA265_RS25265	0.77	+0.3
6,146,951	-		CA265_RS25265	0.77	-0.6
6,147,019	+				-0.2
6,147,109	+				-0.7
6,147,109	+				-0.2
6,147,114	+				+0.8
6,147,206	+		CA265_RS25270	0.23	-1.9
6,147,372	+		CA265_RS25270	0.64	+0.4
6,147,375	-		CA265_RS25270	0.64	+0.2
6,147,548	+				+0.6
6,147,567	+				+0.6
6,147,567	+				+0.0
6,147,568	-				-0.5
6,147,626	+				-0.0
6,147,627	-				-0.3
6,147,666	+				-0.3
6,147,667	-				-0.8
6,147,714	+				+0.1
6,147,787	+				-0.9
6,147,797	-				-1.0
6,147,896	-				-1.1
6,147,973	+		CA265_RS25275	0.20	-0.8
6,148,095	+		CA265_RS25275	0.35	-0.9
6,148,096	-		CA265_RS25275	0.35	-0.5
6,148,174	-		CA265_RS25275	0.45	-0.1
6,148,230	+		CA265_RS25275	0.52	-0.4
6,148,282	+				+0.0
6,148,283	-		CA265_RS25275	0.59	+0.2
6,148,336	+		CA265_RS25275	0.66	-2.1
6,148,369	+		CA265_RS25275	0.70	-1.3
6,148,370	-		CA265_RS25275	0.70	-1.5
6,148,414	-		CA265_RS25275	0.75	-1.6
6,148,520	+		CA265_RS25275	0.89	-2.1
6,148,520	+		CA265_RS25275	0.89	-1.4
6,148,527	-		CA265_RS25275	0.90	+1.6
6,148,529	+				-1.1
6,148,535	-				-1.5
6,148,535	-				-1.0
6,148,535	-				-1.1
6,148,558	+				-1.3
6,148,558	+				-1.4
6,148,620	+				-0.2
6,148,645	+				+0.9
6,148,648	+				-0.2
6,148,654	-				-0.4
6,148,717	+				+0.9
6,148,726	-				+0.2
6,148,734	+				-0.1
6,148,779	-		CA265_RS25280	0.13	+0.9
6,148,809	+		CA265_RS25280	0.21	-0.3
6,148,839	+		CA265_RS25280	0.29	-0.2
6,148,859	-		CA265_RS25280	0.35	+0.4
6,148,918	+		CA265_RS25280	0.51	+0.1
6,148,918	+		CA265_RS25280	0.51	-0.1
6,149,028	+		CA265_RS25280	0.81	+0.7
6,149,090	-				+0.5
6,149,099	-				+0.2
6,149,129	-				-0.3
6,149,138	-				-0.0
6,149,154	-				+0.8
6,149,222	+				+0.2
6,149,275	-				-0.4