Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS23465

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
5,738,544	-		CA265_RS23455	0.77	+0.4
5,738,548	-		CA265_RS23455	0.78	+0.3
5,738,592	-				-0.4
5,738,684	+				-0.9
5,738,684	+				+0.0
5,738,684	+				+1.2
5,738,687	+				+0.4
5,738,688	-				+0.5
5,738,688	-				+0.0
5,738,691	+				+0.7
5,738,795	+		CA265_RS23460	0.25	+1.2
5,738,806	-		CA265_RS23460	0.28	-0.2
5,738,833	+		CA265_RS23460	0.34	-0.3
5,738,838	+		CA265_RS23460	0.35	-1.0
5,738,864	+				+2.2
5,738,864	+		CA265_RS23460	0.42	+1.0
5,739,031	-		CA265_RS23460	0.82	+0.3
5,739,047	+		CA265_RS23460	0.86	-0.5
5,739,100	-				+0.3
5,739,100	-				+0.8
5,739,106	+				-1.6
5,739,107	-				+0.1
5,739,163	+				+0.6
5,739,264	+				+0.6
5,739,339	-				-0.6
5,739,344	+				+0.7
5,739,346	+				-1.3
5,739,350	-				-0.4
5,739,396	+				+0.3
5,739,437	+				+0.5
5,739,454	-				-0.2
5,739,457	-				-0.4
5,739,539	+				+0.1
5,739,932	-		CA265_RS23465	0.36	-1.0
5,739,940	+		CA265_RS23465	0.37	+0.3
5,739,941	-		CA265_RS23465	0.37	-2.1
5,739,965	+		CA265_RS23465	0.39	+0.3
5,740,001	-		CA265_RS23465	0.42	-0.5
5,740,068	+		CA265_RS23465	0.47	+0.9
5,740,144	+		CA265_RS23465	0.53	-0.1
5,740,292	+		CA265_RS23465	0.64	-2.0
5,740,292	+		CA265_RS23465	0.64	-0.9
5,740,314	-		CA265_RS23465	0.66	+0.7
5,740,404	+		CA265_RS23465	0.73	-0.3
5,740,483	-		CA265_RS23465	0.79	+0.0
5,740,631	-		CA265_RS23465	0.90	-0.9
5,740,672	+				+1.0
5,740,672	+				+1.9
5,740,672	+				+0.1
5,740,672	+				+0.1
5,740,673	-				-0.4
5,740,673	-				-0.8
5,740,673	-				+0.1
5,740,674	+				-0.2
5,740,674	+				-1.1
5,740,674	+				+0.1
5,740,674	+				+0.4
5,740,675	-				-0.7
5,740,675	-				-0.6
5,740,677	-				+1.7
5,740,699	+				-0.3
5,740,700	-				-1.1
5,740,754	+				-1.0
5,740,755	-				+0.3
5,740,831	-				+0.2
5,740,839	+				+0.6
5,740,853	-				+0.9
5,740,857	-				-0.0
5,741,092	+		CA265_RS23470	0.25	-0.8
5,741,139	+		CA265_RS23470	0.30	+0.1
5,741,140	-		CA265_RS23470	0.31	-0.1
5,741,239	+		CA265_RS23470	0.41	-0.6
5,741,270	+		CA265_RS23470	0.44	-1.1
5,741,290	+		CA265_RS23470	0.47	-0.3
5,741,299	+		CA265_RS23470	0.48	-1.4
5,741,300	-		CA265_RS23470	0.48	-1.1
5,741,316	-		CA265_RS23470	0.49	-1.3
5,741,341	+		CA265_RS23470	0.52	-0.4
5,741,435	-		CA265_RS23470	0.62	+0.4
5,741,435	-		CA265_RS23470	0.62	-0.0
5,741,546	-		CA265_RS23470	0.74	+1.5
5,741,546	-		CA265_RS23470	0.74	-0.3
5,741,546	-		CA265_RS23470	0.74	-2.6
5,741,552	-		CA265_RS23470	0.75	+0.1
5,741,569	+		CA265_RS23470	0.77	-0.6
5,741,569	+		CA265_RS23470	0.77	-0.7
5,741,582	-		CA265_RS23470	0.78	+0.3
5,741,594	-		CA265_RS23470	0.79	-0.8
5,741,722	+				-1.8
5,741,722	+				-0.4
5,741,741	-				+2.0
5,741,741	-				+0.1