Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS20070

Experiment: R2A with Paraquat dichloride 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.001 mg/ml
4,962,765	+				-1.2
4,962,791	+				+0.6
4,962,792	-				-0.2
4,962,792	-				-0.1
4,962,823	+				+1.0
4,962,823	+				+0.5
4,962,878	-				+0.3
4,962,881	+				+0.2
4,962,882	-				-0.2
4,962,923	+		CA265_RS20065	0.12	+0.3
4,963,098	-				+0.1
4,963,116	+				+0.4
4,963,130	+				-0.0
4,963,130	+				+0.6
4,963,130	+				+0.8
4,963,170	+				-0.6
4,963,201	-				-0.9
4,963,274	+				-0.2
4,963,329	+				-0.2
4,963,330	-				-0.1
4,963,380	-				+0.1
4,963,392	-				-0.2
4,963,524	+				-0.2
4,963,525	-				-0.8
4,963,525	-				-0.2
4,963,592	+				-0.7
4,963,593	-				-0.3
4,963,593	-				-0.2
4,963,632	-				+0.1
4,963,685	-				-1.2
4,963,686	+				+0.0
4,963,687	-				+0.5
4,963,690	+				-0.1
4,963,690	+				+0.9
4,963,690	+				-0.6
4,963,759	-		CA265_RS20070	0.13	+0.7
4,963,765	+		CA265_RS20070	0.14	-0.4
4,963,813	+		CA265_RS20070	0.23	-1.7
4,963,876	-		CA265_RS20070	0.35	-1.4
4,963,883	-		CA265_RS20070	0.37	-0.4
4,963,968	-		CA265_RS20070	0.53	-0.8
4,964,044	+		CA265_RS20070	0.67	-1.4
4,964,047	+		CA265_RS20070	0.67	-1.8
4,964,052	-		CA265_RS20070	0.68	-1.5
4,964,052	-		CA265_RS20070	0.68	-0.2
4,964,162	+		CA265_RS20070	0.89	-1.2
4,964,222	+				-0.7
4,964,222	+				+0.5
4,964,223	-				-0.2
4,964,247	+				-0.6
4,964,296	-				-0.8
4,964,303	+				-0.4
4,964,320	+				-0.8
4,964,351	+				-1.9
4,964,370	+				-1.6
4,964,387	+				-0.8
4,964,392	-				-1.3
4,964,511	-				+0.5
4,964,688	-		CA265_RS20075	0.10	+0.5
4,964,717	+		CA265_RS20075	0.19	-0.2
4,964,718	-		CA265_RS20075	0.20	-0.2
4,964,789	-		CA265_RS20075	0.42	+1.2
4,964,865	-		CA265_RS20075	0.66	-0.1
4,964,875	+		CA265_RS20075	0.69	+2.4
4,964,876	-		CA265_RS20075	0.69	+0.4
4,964,963	-				-0.1
4,965,103	+				+0.4
4,965,136	+				+1.0